Os11g0306300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Herbicide safener binding protein.
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Os11g0306300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Herbicide safener binding protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.91 | 0.398 | 2.89 | -0.0701 | 0.0885 | -3.44 | -0.247 | 10 | 0.132 | 4.13 | 0.3603 | 10 | -- | -- |
| 73.32 | 0.402 | 2.88 | -0.05 | 0.106 | -0.56 | -0.366 | -- | 0.123 | 4.21 | 0.3603 | 10 | -- | -- |
| 72.02 | 0.395 | 2.89 | -0.0654 | 0.091 | -3.5 | -- | 10.4 | 0.135 | 2.76 | 0.221 | 9 | -- | -- |
| 73.51 | 0.399 | 2.87 | -0.0397 | 0.104 | -0.461 | -- | -- | 0.127 | 3.82 | 1.359e-05 | 5 | -- | -- |
| 72.48 | 0.397 | 2.89 | -0.0665 | -- | -3.77 | -- | 11.1 | 0.137 | -- | 0.4999 | 9 | -- | -- |
| 73.63 | 0.402 | 2.88 | -0.0447 | 0.112 | -- | -0.328 | -- | 0.122 | 4.09 | -- | -- | -- | -- |
| 73.88 | 0.403 | 2.88 | -0.0412 | 0.112 | -- | -- | -- | 0.123 | 3.03 | -- | -- | -- | -- |
| 74.08 | 0.401 | 2.88 | -0.0472 | -- | -0.623 | -- | -- | 0.13 | -- | 0.2583 | 5 | -- | -- |
| 73.53 | 0.399 | 2.87 | -- | 0.104 | -0.55 | -- | -- | 0.132 | 3.08 | 0.1774 | 5 | -- | -- |
| 74.59 | 0.404 | 2.88 | -0.0365 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 73.92 | 0.402 | 2.88 | -- | 0.111 | -- | -- | -- | 0.128 | 3.03 | -- | -- | -- | -- |
| 74.14 | 0.401 | 2.87 | -- | -- | -0.606 | -- | -- | 0.135 | -- | 0.3625 | 5 | -- | -- |
| 74.63 | 0.403 | 2.88 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.28 | humidity | 80 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 2 | 65.30 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 14 |
| 6 | 65.30 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 15 | 65.32 | radiation | 30 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 26 | 65.32 | humidity | 70 | 10 | < th | dose dependent | rect. | 19 | 13 |
| 101 | 65.34 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 102 | 65.34 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 105 | 65.35 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 108 | 65.35 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 195 | 65.35 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 658 | 67.24 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 753 | 68.18 | radiation | 30 | 30 | < th | dose independent | sin | 11 | NA |
| 756 | 68.20 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 770 | 68.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 841 | 68.66 | wind | 3 | 10 | > th | dose independent | rect. | 7 | 1 |
| 863 | 68.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 865 | 68.89 | humidity | 70 | 10 | < th | dose independent | sin | 11 | NA |
| 876 | 69.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 919 | 69.16 | radiation | 30 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 926 | 69.25 | humidity | 70 | 10 | > th | dose independent | sin | 11 | NA |
| 928 | 69.27 | radiation | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 951 | 69.39 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 953 | 69.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 967 | 69.44 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 980 | 69.45 | humidity | 70 | 4320 | < th | dose dependent | rect. | 6 | 1 |