Os08g0157500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L- methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT).
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Os08g0157500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L- methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.64 | 0.696 | 14.6 | 1.54 | 1.25 | -1.05 | 0.15 | -4.13 | 0.998 | 9.64 | 26.37 | 391 | -- | -- |
| 222.03 | 0.694 | 14.6 | 1.97 | 1.25 | -1.49 | 0.229 | -- | 1.06 | 9.69 | 27.27 | 390 | -- | -- |
| 219.71 | 0.69 | 14.6 | 1.52 | 1.24 | -1.03 | -- | -4.29 | 0.991 | 9.6 | 26.4 | 411 | -- | -- |
| 222.23 | 0.694 | 14.5 | 1.98 | 1.25 | -1.51 | -- | -- | 1.06 | 9.73 | 27.24 | 390 | -- | -- |
| 288.68 | 0.791 | 14.6 | 1.53 | -- | -1.71 | -- | -3.6 | 1.09 | -- | 24.6 | 594 | -- | -- |
| 259.44 | 0.755 | 14.5 | 1.74 | 1.61 | -- | 0.971 | -- | 1.06 | 8.42 | -- | -- | -- | -- |
| 262.37 | 0.759 | 14.5 | 1.77 | 1.61 | -- | -- | -- | 1.06 | 8.49 | -- | -- | -- | -- |
| 290.63 | 0.794 | 14.5 | 2.14 | -- | -2.02 | -- | -- | 1.22 | -- | 25 | 595 | -- | -- |
| 322.47 | 0.836 | 14.6 | -- | 1.3 | -1.25 | -- | -- | 0.877 | 9.36 | 27.79 | 374 | -- | -- |
| 407.29 | 0.943 | 14.6 | 1.78 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 345.02 | 0.869 | 14.6 | -- | 1.62 | -- | -- | -- | 0.859 | 8.41 | -- | -- | -- | -- |
| 405.36 | 0.938 | 14.6 | -- | -- | -1.79 | -- | -- | 0.83 | -- | 27.29 | 563 | -- | -- |
| 490.67 | 1.03 | 14.6 | -- | -- | -- | -- | -- | 0.874 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 3 | 214.82 | temperature | 25 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 13 | 216.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 18 | 217.58 | radiation | 10 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 23 | 218.07 | radiation | 10 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 39 | 218.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 10 |
| 43 | 218.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 44 | 218.59 | temperature | 25 | 270 | > th | dose dependent | sin | 16 | NA |
| 51 | 218.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 89 | 219.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 90 | 219.68 | temperature | 25 | 10 | > th | dose dependent | sin | 11 | NA |
| 116 | 220.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 118 | 220.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 8 |
| 132 | 220.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 138 | 220.81 | temperature | 30 | 270 | > th | dose dependent | sin | 11 | NA |
| 144 | 220.88 | radiation | 10 | 270 | > th | dose independent | rect. | 16 | 1 |
| 152 | 221.10 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 4 |
| 185 | 221.41 | radiation | 20 | 270 | > th | dose independent | rect. | 16 | 15 |
| 255 | 222.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 304 | 222.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 312 | 222.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 14 |
| 348 | 223.23 | temperature | 25 | 720 | > th | dose dependent | sin | 5 | NA |
| 351 | 223.26 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 371 | 223.42 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 2 |
| 377 | 223.45 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 5 |
| 382 | 223.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 412 | 223.68 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 414 | 223.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 425 | 223.80 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 432 | 223.86 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 441 | 223.87 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 478 | 223.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 524 | 224.09 | temperature | 30 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 547 | 224.11 | temperature | 30 | 270 | < th | dose independent | sin | 15 | NA |
| 566 | 224.12 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 582 | 224.17 | temperature | 30 | 270 | < th | dose independent | rect. | 10 | 12 |
| 771 | 224.39 | temperature | 30 | 720 | > th | dose dependent | sin | 23 | NA |
| 828 | 224.59 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 22 |
| 879 | 224.66 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 899 | 224.73 | temperature | 30 | 270 | > th | dose independent | sin | 15 | NA |
| 981 | 225.10 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 988 | 225.12 | temperature | 30 | 270 | > th | dose independent | sin | 12 | NA |
| 991 | 225.14 | humidity | 60 | 270 | < th | dose independent | rect. | 16 | 1 |