BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0417400 Os04g0417400|Os04g0417400
(451 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0417400 U box domain containing protein 691 0.0
Os02g0539200 U box domain containing protein 370 e-102
Os04g0686000 U box domain containing protein 236 2e-62
Os01g0865700 U box domain containing protein 186 5e-47
Os07g0177900 181 1e-45
Os11g0573500 117 3e-26
Os04g0358300 111 1e-24
Os02g0548700 U box domain containing protein 104 1e-22
Os04g0589700 U box domain containing protein 96 4e-20
Os12g0586700 96 7e-20
Os06g0248500 U box domain containing protein 95 1e-19
Os02g0690600 U box domain containing protein 91 1e-18
Os03g0240600 U box domain containing protein 91 2e-18
Os02g0738200 U box domain containing protein 90 3e-18
Os10g0123100 87 3e-17
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 82 8e-16
Os02g0234300 U box domain containing protein 82 9e-16
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 81 1e-15
Os12g0161100 U box domain containing protein 79 5e-15
Os01g0823900 Arm repeat protein 79 7e-15
Os07g0561400 78 1e-14
Os05g0476700 Similar to Arm repeat protein 78 2e-14
Os02g0540700 Similar to Arm repeat-containing protein 77 3e-14
Os04g0437300 U box domain containing protein 76 5e-14
Os08g0481200 Similar to Arm repeat containing protein 76 6e-14
Os01g0901000 Similar to Arm repeat-containing protein 75 8e-14
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 75 9e-14
Os02g0732200 U box domain containing protein 75 1e-13
Os03g0232600 U box domain containing protein 75 1e-13
Os10g0155050 74 3e-13
Os02g0488701 U box domain containing protein 73 5e-13
Os02g0705600 Armadillo-like helical domain containing protein 72 7e-13
Os01g0884400 U box domain containing protein 71 1e-12
Os04g0348400 U box domain containing protein 71 2e-12
Os01g0229700 U box domain containing protein 70 3e-12
Os04g0489800 U box domain containing protein 69 6e-12
Os04g0418500 U box domain containing protein 69 1e-11
Os05g0439400 Similar to Arm repeat containing protein 68 1e-11
>Os04g0417400 U box domain containing protein
Length = 451
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/451 (79%), Positives = 360/451 (79%)
Query: 1 MGXXXXXXXXXXXXXLSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVT 60
MG LSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVT
Sbjct: 1 MGEESSPAAAPAVEVLSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVT 60
Query: 61 KQRLAPADREPTPNHTLRRLIQGWCAVHAVERFPTXXXXXXXXXXXXXXXXXXXXXXXXX 120
KQRLAPADREPTPNHTLRRLIQGWCAVHAVERFPT
Sbjct: 61 KQRLAPADREPTPNHTLRRLIQGWCAVHAVERFPTPRPPVDAARVAAIVDAARPLLRRRR 120
Query: 121 XXXXXMASLRELADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEET 180
MASLRELADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEET
Sbjct: 121 QREELMASLRELADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEET 180
Query: 181 TCGGVHDPAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSR 240
TCGGVHDPAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSR
Sbjct: 181 TCGGVHDPAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSR 240
Query: 241 MQGIHLLKSALPAMAPARLTSXXXXXXXXXXXXXXXXPSAKAVKVALHVLCRLCPWARNR 300
MQGIHLLKSALPAMAPARLTS PSAKAVKVALHVLCRLCPWARNR
Sbjct: 241 MQGIHLLKSALPAMAPARLTSARAALVDGVVGVVADRPSAKAVKVALHVLCRLCPWARNR 300
Query: 301 VKAVDAGAVSALVRXXXXXXXXXXXXXXXXXXXAAVAIDHICRLRXXXXXXXXXXXXXQR 360
VKAVDAGAVSALVR AAVAIDHICRLR QR
Sbjct: 301 VKAVDAGAVSALVRLLLDEGCGGGGGDRRACELAAVAIDHICRLRGGAPGSGGAPGGAQR 360
Query: 361 QVACSADRCPHTAGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERT 420
QVACSADRCPHTAGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERT
Sbjct: 361 QVACSADRCPHTAGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERT 420
Query: 421 RARAREMLKMHARVWRDSPCLASHLNASYPR 451
RARAREMLKMHARVWRDSPCLASHLNASYPR
Sbjct: 421 RARAREMLKMHARVWRDSPCLASHLNASYPR 451
>Os02g0539200 U box domain containing protein
Length = 442
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/441 (51%), Positives = 268/441 (60%), Gaps = 16/441 (3%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGE-----CPVTKQRLAPADREP 71
SYF+CPISLEIMRDPVTL+TGITYDR SIERW+F G G+ CPVT+++LAPA+RE
Sbjct: 10 SYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRRQLAPAEREA 69
Query: 72 TPNHTLRRLIQGWCAVHAVERFPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASLRE 131
TPNHTLRRLIQ WCA HAVERFPT +A+LRE
Sbjct: 70 TPNHTLRRLIQAWCAAHAVERFPTPRPPVDSCRVAALVDEGTTTMLGGGGRQRQLAALRE 129
Query: 132 LADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEETTCGGVHDPAKA 191
+ I AESDRN+RCV+ GAVEFL+SVV + S A + S+ ++ + P
Sbjct: 130 IKAIAAESDRNKRCVEATPGAVEFLVSVVVQ--SHAAASTSASSDDDDLFDSVIDSPMST 187
Query: 192 SSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSRMQGIHLLKSAL 251
SSPEE AL +L+SLK SE + +RVL G FL+T+A VLRRPSY SR I LLK+
Sbjct: 188 SSPEEEALGVLYSLKPSEPTLRRVLGKDNGVGFLDTLASVLRRPSYRSRAYAILLLKAVT 247
Query: 252 PAMAPARLTSXXXXXXXXXXXXXXXXPSAKAVKVALHVLCRLCPWARNRVKAVDAGAVSA 311
AM P RL + S+KAVK ALHVLCRLCPW RNRVKAV+AGAV+A
Sbjct: 248 SAMPPERLMAVSPELVEEVVRVVSDGVSSKAVKAALHVLCRLCPWGRNRVKAVEAGAVAA 307
Query: 312 LVRXXXXXXXXXXXXXXXXXXXAAVAIDHICRLRXXXXXXXXXXXXXQRQVACSADRCPH 371
LV A VAIDH+C +A + R
Sbjct: 308 LVE--LLLDEEGGGGRRRAAELAVVAIDHLC----GCAEGRSELVAHPAGLAVVSKRAMR 361
Query: 372 T--AGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERTRARAREMLK 429
A ESAVRALHAVAR++AT AVLQEML VGVVA+LL ++Q GER RARAREML+
Sbjct: 362 VSPAATESAVRALHAVARNAATPAVLQEMLAVGVVAKLLLVLQADG-GERARARAREMLR 420
Query: 430 MHARVWRDSPCLASHLNASYP 450
+ARVW+DSPCL +HL ASYP
Sbjct: 421 ANARVWKDSPCLQAHLKASYP 441
>Os04g0686000 U box domain containing protein
Length = 413
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 216/440 (49%), Gaps = 49/440 (11%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
SYFVCPISL+IMRDPVTL TGITYDR+ IERW+ T G CP+TKQ + P D +PTPNHT
Sbjct: 15 SYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLT--AGTCPLTKQPV-PPDCDPTPNHT 71
Query: 77 LRRLIQGWCAVHA---VERFPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASLRELA 133
LRRLIQ WCA+HA V+ PT + +LREL
Sbjct: 72 LRRLIQSWCALHADHGVDLVPT----PKPPADRARVADLVSRLRAATSSAALLDALRELR 127
Query: 134 DIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEETTCGGVHDPAKASS 193
D+ AES+RNR+ LL+ V V S + + C
Sbjct: 128 DVAAESERNRK-----------LLAAVPGAVDVLAAVVVASCRDAKAAC----------- 165
Query: 194 PEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSRMQGIHLLKSALPA 253
+ AL I+ SL+LSE R++E + E+ ++ + L+R + SR LL++
Sbjct: 166 --DEALEIVCSLELSERCLARLVERN--EELVDALVATLQRTNTTSRAHAALLLEAVTAV 221
Query: 254 MAPARLTSXXXXXXXXXXXXXXXXPSAKAVKVALHVLCRLCPWARNRVKAVDAGAVSALV 313
M RL S S+ A + ALHVL W RNRVKAVDAGAV+ LV
Sbjct: 222 MPSNRLVSLPEEVFGEAVQLLRDRVSSPATRAALHVLVGTTSWGRNRVKAVDAGAVAVLV 281
Query: 314 RXXXXXXXXXXXXXXXXXXXAAVAIDHICRL---RXXXXXXXXXXXXXQRQVACSADRCP 370
A A+D +C R R+V ++
Sbjct: 282 -----DMLLDGPVERRGCELALAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSE--- 333
Query: 371 HTAGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERTRARAREMLKM 430
+E AVR L +VARH+AT+AV+QEM G V +L + Q GERTR RARE L++
Sbjct: 334 --VASEKAVRVLRSVARHAATAAVVQEMGQTGAVEKLCVVAQSEQCGERTRERARETLRL 391
Query: 431 HARVWRDSPCLASHLNASYP 450
HAR WR+SPCL HL A YP
Sbjct: 392 HARAWRNSPCLQPHLQALYP 411
>Os01g0865700 U box domain containing protein
Length = 404
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 200/438 (45%), Gaps = 48/438 (10%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDG-HGECPVTKQRLAPADREPTPNH 75
SYFVCPISL++MRDPVTL TGI+YDR +I RW+ G CPVT+Q L E TPNH
Sbjct: 10 SYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHG-LELTPNH 68
Query: 76 TLRRLIQGWCAVHAVERFPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASLRELADI 135
TLRRLIQ W A + +LR L ++
Sbjct: 69 TLRRLIQSWAA-----SVSPGSAVDEEVAALRPVSSDEVASLLSDAAAAQVGALRRLREL 123
Query: 136 VAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPEETTCGGVHDPAKASSPE 195
AE + +R ++ G + L VV T G + S+
Sbjct: 124 AAECEDSRAMLESQGGVFDVLSRVV--------------------TSG-----SACSTAR 158
Query: 196 EAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSRMQGIHLLKSALPAMA 255
E A+ +L SL++ E+ V G + E++ VLR + SR + L+++ A+
Sbjct: 159 EEAVGVLASLRIPEQELIGVSTRHG--NLAESLTAVLRSSNLQSRAHAVQLVRTLADAVV 216
Query: 256 PARLTSXXXXXXXXXXXXXXXXPSAKAVKVALHVLCRLCPWARNRVKAVDAGAVSALVRX 315
PA + SA+A K +LH L LCP+ R+RVK V AGAV+ALV
Sbjct: 217 PAWVIGLNAELLAEVVGVVRDRVSARATKASLHALAALCPYGRHRVKIVGAGAVAALVE- 275
Query: 316 XXXXXXXXXXXXXXXXXXAAVAIDHICRL---RXXXXXXXXXXXXXQRQVACSADRCPHT 372
A +D +C R ++V ++
Sbjct: 276 -----LLLDEPERRVCELALAVLDRLCTCAEGRAELVAHAAGVAVVGKKVLRVSE----- 325
Query: 373 AGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERTRARAREMLKMHA 432
A +E AVR L +VARH+AT AVLQEM GVV +L ++ G +T+ +A E+LK+H+
Sbjct: 326 AASERAVRVLRSVARHAATPAVLQEMAQCGVVGKLCLALRSEQCGVKTKEKAHEVLKLHS 385
Query: 433 RVWRDSPCLASHLNASYP 450
RVWR SPCL+ A YP
Sbjct: 386 RVWRASPCLSPSFLALYP 403
>Os07g0177900
Length = 428
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 127/226 (56%), Gaps = 53/226 (23%)
Query: 193 SPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLSRMQGIHLLKSALP 252
SP+EAALSILHSLKLSEESFKRVLEGSGGEDFLET+A
Sbjct: 188 SPDEAALSILHSLKLSEESFKRVLEGSGGEDFLETLA----------------------- 224
Query: 253 AMAPARLTSXXXXXXXXXXXXXXXXPSAKAVKVALHVLCRLCPWARNRVKAVDAGAVSAL 312
PSAKAVKVALHVLCRLCPW+RNRVKAVD GAVSAL
Sbjct: 225 -------------------------PSAKAVKVALHVLCRLCPWSRNRVKAVDVGAVSAL 259
Query: 313 VRXXXXXXXXXXXXXXXXXXXAAVAIDHICRLRXXXXXXXXXXXXXQRQVACSADRCPHT 372
V A +AIDHIC VAC+A R T
Sbjct: 260 VHLLLNEGCGGDRRACEL---AVMAIDHICGCAEGHLALVAHPTGLA-AVACAATRLS-T 314
Query: 373 AGAESAVRALHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGE 418
AG ESA+RALH VA H+ATSAVLQEML VGV ARL FLVQVGASG+
Sbjct: 315 AGTESAMRALHVVATHTATSAVLQEMLAVGVGARLFFLVQVGASGK 360
>Os11g0573500
Length = 245
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 59 VTKQRLAPADREPTPNHTLRRLIQGWCAVHAVERFPTXXXXXXXXXXXXXXXXXXXXXXX 118
+T+Q LA A+RE TPNHTLRR+IQ CA HA ERFPT
Sbjct: 19 ITRQ-LALAEREATPNHTLRRVIQAGCATHAFERFPTPCAPVDSCRVAALIDEGTTMLGG 77
Query: 119 XXXXXXXMASLRELADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPE 178
+ +LRE+ I ESDRN+RCV+ GAVEFL+SVV + S A SAK +
Sbjct: 78 GGRQRQ-LTALREIKAITTESDRNKRCVEATPGAVEFLVSVVVQ--SHAAASTYMSAKSD 134
Query: 179 ETTCGGVHD-PAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSY 237
+ V D P SSPEE AL +L+SLK E + +R+L G FL+T+A L
Sbjct: 135 DDLLDSVIDSPISTSSPEEEALGVLYSLKPFEPTLRRIL-GKDNGGFLDTLASFL----- 188
Query: 238 LSRMQGIHLLKSALPAMAPARL 259
LLK+ + AM P RL
Sbjct: 189 --------LLKAMMSAMPPERL 202
>Os04g0358300
Length = 227
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 43/195 (22%)
Query: 59 VTKQRLAPADREPTPNHTLRRLIQGWCAVHAVERFPTXXXXXXXXXXXXXXXXXXXXXXX 118
+T+Q LAPA+ E TPN TLRRLIQ W
Sbjct: 19 ITRQ-LAPAEWEATPNQTLRRLIQAW---------------------------------- 43
Query: 119 XXXXXXXMASLRELADIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAKPE 178
+A+LRE+ I ESDRN+RC++ GAV+FL+SVV + S A +TSA+ +
Sbjct: 44 ----QRHLAALREIKAIAVESDRNKRCIEATPGAVKFLVSVVVQ--SHAAASTSTSARLD 97
Query: 179 ETTCGGVHD-PAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSY 237
+ + D P SSP++ AL +L+SLK SE + +R+L G FL+T+A VLRRP+Y
Sbjct: 98 DDLLDSMIDSPMSTSSPKKEALGVLYSLKPSEPTLRRIL-GKDNGGFLDTLASVLRRPNY 156
Query: 238 LSRMQGIHLLKSALP 252
SR+ + LLK P
Sbjct: 157 RSRVYAVLLLKHPGP 171
>Os02g0548700 U box domain containing protein
Length = 417
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 59/83 (71%), Gaps = 9/83 (10%)
Query: 18 YFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPT--PNH 75
YF CPISLE+MRDPVT+STG TYDR SIE WV T G+ CPVT+ +P DR T PNH
Sbjct: 21 YFRCPISLELMRDPVTVSTGQTYDRASIESWVAT-GNTTCPVTR---SPLDRAFTLIPNH 76
Query: 76 TLRRLIQGWCAVH---AVERFPT 95
TLRRLIQ WC H VER PT
Sbjct: 77 TLRRLIQDWCVAHRSLGVERIPT 99
>Os04g0589700 U box domain containing protein
Length = 421
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F+CPIS+E+M DPVT++TG+TYDR SIERW F G CP T QRLA D TPNHTL+
Sbjct: 9 FLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRLASFDF--TPNHTLK 66
Query: 79 RLIQGW 84
R+I W
Sbjct: 67 RVISSW 72
>Os12g0586700
Length = 111
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 181 TCGGVHDPAKASSPEEAALSILHSLKLSEESFKRVLEGSGGEDFLETMACVLRRPSYLS 239
TCG V D AK SS EEAALSILHSLKL EESF RVLEGSGGEDFLET+ACVLR PSYLS
Sbjct: 2 TCG-VQDSAKVSSLEEAALSILHSLKLFEESFNRVLEGSGGEDFLETLACVLRPPSYLS 59
>Os06g0248500 U box domain containing protein
Length = 449
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
+ FVCPISLE+MRDPVT TGITYDRES+E W GH CPVT + + AD PNH
Sbjct: 40 ANFVCPISLEMMRDPVTAPTGITYDRESVEGW-LARGHDTCPVTGRPVRLADL--VPNHA 96
Query: 77 LRRLIQGWCAVH---AVERFPT 95
RR+IQ WC + VER PT
Sbjct: 97 TRRMIQDWCVANRARGVERVPT 118
>Os02g0690600 U box domain containing protein
Length = 425
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F+CPIS+E+M DPVT+STG+TYDR SIE W+F G CP T Q L+ D TPNHTL+
Sbjct: 11 FLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPLSNFDL--TPNHTLK 68
Query: 79 RLIQGW 84
R+I W
Sbjct: 69 RVISSW 74
>Os03g0240600 U box domain containing protein
Length = 445
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
++F CPISL++MRDPVT TGITYDRE IE W+ T G CPVT L D PNH
Sbjct: 36 AHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDT-GRAVCPVTHAPLRHEDL--VPNHA 92
Query: 77 LRRLIQGWCAVH---AVERFPT 95
+RR+IQ WC + VER PT
Sbjct: 93 IRRVIQDWCVANRSRGVERIPT 114
>Os02g0738200 U box domain containing protein
Length = 456
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
+F+CPISL++MRDPVT TGITYDR+ +E W G CPVT + L P E PNH
Sbjct: 45 DHFLCPISLDMMRDPVTAPTGITYDRDGVEVW-LERGRPTCPVTGRPLRP--EELVPNHA 101
Query: 77 LRRLIQGWCAVH---AVERFPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASLRELA 133
RR+IQ WC + VER PT R A
Sbjct: 102 TRRMIQEWCVANRALGVERVPTPRVPVSAADAREILEGVAAAARRGDAAACGRMVARARA 161
Query: 134 DIVAESDRNRRCVQGASGAVEFLLSVVKERASVAGVDDATSAK 176
+ ES+RNRRC+ AS E L++ R + A D A+
Sbjct: 162 -LGKESERNRRCL--ASAGAERALALAFSRLAAASTDQQAEAR 201
>Os10g0123100
Length = 460
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVF-------TDGHGECPVTKQRLAPADREP 71
F CPISLE+MRDPV TGITYDR IE W+ CPVTK L D
Sbjct: 25 FRCPISLELMRDPVVGPTGITYDRAGIEAWLLAAGAGKTAAASSTCPVTKGDLRADDL-- 82
Query: 72 TPNHTLRRLIQGWCAVH---AVERFPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAS 128
PNH LRR+IQ WC + VER PT +A+
Sbjct: 83 VPNHALRRVIQAWCVANRCRGVERIPT-PRVPVTPAQAGEVLGEVEAAARAGDAARCVAA 141
Query: 129 LRELADIVAESDRNRRCV 146
+RE+ + ESDR+RRC+
Sbjct: 142 VREVGRLARESDRDRRCL 159
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISLE+M+DPV +STG TY+R IE+W+ + GH CP T+Q+++ + TPN+ LR
Sbjct: 220 FRCPISLELMKDPVIVSTGQTYERACIEKWIAS-GHHTCPTTQQKMSTSAL--TPNYVLR 276
Query: 79 RLIQGWCAVHAVE 91
LI WC + +E
Sbjct: 277 SLISQWCETNGME 289
>Os02g0234300 U box domain containing protein
Length = 581
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISL++MRDPV STG TYDR SI +W+ +GH CP + Q L AD PN LR
Sbjct: 154 FSCPISLDLMRDPVVASTGQTYDRPSIIQWI-EEGHSTCPNSGQTL--ADHRLVPNRALR 210
Query: 79 RLIQGWCAVHAVE 91
LI WC V+ ++
Sbjct: 211 SLISQWCGVYGLQ 223
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISL++M+DPV ++TG TY+R IERW+ GH CP T+Q+L ++ TPN+ LR
Sbjct: 298 FRCPISLDLMKDPVIVATGQTYERGCIERWLEA-GHDTCPKTQQKL--PNKSLTPNYVLR 354
Query: 79 RLIQGWCAVHAVE 91
LI WC + +E
Sbjct: 355 SLIAQWCEANGME 367
>Os12g0161100 U box domain containing protein
Length = 437
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 18 YFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTL 77
+F+CPISL+ M+DPVT TGI+YDR +I RW GH CPVT L+ +D TPN TL
Sbjct: 8 HFMCPISLQPMQDPVTSPTGISYDRRAIHRW-LAAGHSSCPVTGHPLSLSDL--TPNLTL 64
Query: 78 RRLIQGW 84
RRLI W
Sbjct: 65 RRLIHSW 71
>Os01g0823900 Arm repeat protein
Length = 680
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
S F CPISL++MRDPV +++G TYDRESI+RW F+ G CP T Q L A+ E N
Sbjct: 276 SDFRCPISLDLMRDPVVVASGQTYDRESIDRW-FSSGKSTCPKTGQVL--ANLELVSNKA 332
Query: 77 LRRLIQGWCAVHAV 90
L+ LI WC + V
Sbjct: 333 LKNLISKWCRENGV 346
>Os07g0561400
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 247 LKSALPAMAPARLTSXXXXXXXXXXXXXXXX-PSAKAVKVALHVLCRLCPWARNRVKAVD 305
LK ALPAM P RLTS PSAKAVKVALHVL RLCPW++NRVKAVD
Sbjct: 155 LKLALPAMPPTRLTSASATALVDGVVGVVADRPSAKAVKVALHVLYRLCPWSQNRVKAVD 214
Query: 306 AGAVSALVR 314
AGAVSALVR
Sbjct: 215 AGAVSALVR 223
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISL++MRDPV ++G TYDRESI RW F G CP T Q L A+ E PN L+
Sbjct: 279 FRCPISLDLMRDPVVSASGQTYDRESITRW-FGSGKSTCPKTGQVL--ANLELVPNKALK 335
Query: 79 RLIQGWCAVHAV 90
LI WC + V
Sbjct: 336 NLISRWCRENGV 347
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
++F CPISL++MR PV+L TG+TYDR SI+RW+ G+ CP T L D PN T
Sbjct: 77 TFFRCPISLDVMRSPVSLCTGVTYDRASIQRWI-DSGNTTCPATMLPLPSTDL--VPNLT 133
Query: 77 LRRLIQGW 84
LRRLI W
Sbjct: 134 LRRLIALW 141
>Os04g0437300 U box domain containing protein
Length = 426
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 18 YFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTL 77
F CPISL+I DPVTL TG TYDR IERW GH CPVT Q L A PN TL
Sbjct: 6 LFRCPISLDIFTDPVTLCTGQTYDRPCIERW-LAAGHRTCPVTMQPLGDATAL-VPNRTL 63
Query: 78 RRLIQGW 84
R LI+ W
Sbjct: 64 RHLIERW 70
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F+CPI+L IMRDPV ++TG TY+R SI++W+ + G CP T+QRL+ PN+ L+
Sbjct: 273 FLCPITLAIMRDPVIVATGQTYERRSIQKWLDS-GERTCPKTRQRLSHM--SLAPNYALK 329
Query: 79 RLIQGWCAVHAVE 91
LI WC + VE
Sbjct: 330 NLILEWCDKNKVE 342
>Os01g0901000 Similar to Arm repeat-containing protein
Length = 800
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 21 CPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLRRL 80
CPISL++M DPV +S+G TY+R IE+W F DGH CP T+Q+L+ TPN+ ++ L
Sbjct: 299 CPISLQLMYDPVIISSGQTYERVCIEKW-FNDGHSTCPKTQQQLSHLSL--TPNYCVKAL 355
Query: 81 IQGWC 85
I WC
Sbjct: 356 IASWC 360
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISLE+M+DPV +S+G TY+R I++W+ + GH CP T+Q L+ TPN L+
Sbjct: 232 FRCPISLELMQDPVIVSSGQTYERSCIQKWLDS-GHKTCPKTQQPLSHTSL--TPNFVLK 288
Query: 79 RLIQGWCAVHAVE 91
LI WC + +E
Sbjct: 289 SLISQWCEANGIE 301
>Os02g0732200 U box domain containing protein
Length = 637
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPISLE+MRDPV +STG TY+R I+RW+ G+ CP T+ +L + TPN+ LR
Sbjct: 266 FRCPISLELMRDPVIVSTGQTYERAFIQRWIDC-GNRTCPKTQLKL--QNITLTPNYVLR 322
Query: 79 RLIQGWCAVHAVE 91
LI WC +E
Sbjct: 323 SLILQWCEEKGIE 335
>Os03g0232600 U box domain containing protein
Length = 459
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
+ F+CPISLE M DPVTL TG TY+ +I RW+ GH CP T Q L D P PN T
Sbjct: 67 AVFICPISLEPMVDPVTLCTGQTYESANISRWLAL-GHRTCPTTMQEL--WDVTPIPNTT 123
Query: 77 LRRLIQGW 84
LR+LI W
Sbjct: 124 LRQLIAAW 131
>Os10g0155050
Length = 157
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 382 LHAVARHSATSAVLQEMLPVGVVARLLFLVQVGASGERTRARAREML 428
+HA+ARHSAT AVLQEML VGV ARLLFLVQVGASGE+TRARAR +
Sbjct: 1 MHAMARHSATPAVLQEMLAVGVGARLLFLVQVGASGEQTRARARWTM 47
>Os02g0488701 U box domain containing protein
Length = 423
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F+CPIS EIMRDPV L++G TYDR I+ W + G+ CP T+Q L ++ PNH +R
Sbjct: 43 FLCPISSEIMRDPVVLASGQTYDRRFIQEW-LSAGNRTCPQTQQVL--SNTILIPNHLVR 99
Query: 79 RLIQGWCAVHAVERFP 94
+I WC + + P
Sbjct: 100 SMIAQWCTENGIALSP 115
>Os02g0705600 Armadillo-like helical domain containing protein
Length = 770
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CPIS ++MRDPV +++G TY+RE+IERW F +G+ CP T +L + PN +R
Sbjct: 274 FCCPISTKLMRDPVIITSGQTYERENIERW-FREGYDTCPRTHIKL--ENFAMIPNTCMR 330
Query: 79 RLIQGWCAVHAV 90
LI WC H
Sbjct: 331 DLIFNWCKEHGF 342
>Os01g0884400 U box domain containing protein
Length = 796
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F CP+SLE+M DPV +++G TY+ I +W F G+ CP T+Q L + PN T++
Sbjct: 228 FCCPLSLELMSDPVIVASGQTYEHVFIRKW-FDLGYNICPKTRQILGHT--KLIPNFTVK 284
Query: 79 RLIQGWCAVHAV 90
+LI+ WC VH +
Sbjct: 285 QLIENWCEVHGI 296
>Os04g0348400 U box domain containing protein
Length = 459
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
F+CPIS IMRDPV + +G TYDR SI+ W F+ G+ CP T+Q L+ PNH +R
Sbjct: 79 FLCPISSGIMRDPVVIESGQTYDRRSIQEW-FSAGNQICPQTQQVLSHTI--VIPNHLVR 135
Query: 79 RLIQGWCAVHAV 90
+I WC + +
Sbjct: 136 TMISQWCTENGL 147
>Os01g0229700 U box domain containing protein
Length = 1392
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLR 78
FVCPI+ ++ DPVTL TG TY+R +I+ W G+ CP+T+ RL A P+ N+ L+
Sbjct: 428 FVCPITSQVFDDPVTLETGQTYERRAIQEW-LDRGNATCPITRHRLHGA-HLPSTNYVLK 485
Query: 79 RLIQGW 84
RLI W
Sbjct: 486 RLIAAW 491
>Os04g0489800 U box domain containing protein
Length = 800
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 21 CPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHTLRRL 80
CPISL++M DPV +++G TY+R IE+W F+ G+ CP T+ L+ TPN+ ++ L
Sbjct: 285 CPISLQLMHDPVIIASGQTYERACIEKW-FSSGNTTCPKTRNELSQLSM--TPNYCIKGL 341
Query: 81 IQGWCAVHAV 90
I WC + V
Sbjct: 342 IASWCEQNGV 351
>Os04g0418500 U box domain containing protein
Length = 451
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
S+F CPISL++MR PV+L TG+TYDR SI+RW+ + G+ CP T L D PN T
Sbjct: 39 SFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDS-GNTTCPATMLPLPSTDL--VPNLT 95
Query: 77 LR 78
LR
Sbjct: 96 LR 97
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 19 FVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPT 72
F CPISLE+MR PV+L TG TYDR SI+RW+ T GH CP T+ LA D P
Sbjct: 32 FRCPISLEVMRSPVSLPTGATYDRASIQRWLDT-GHRTCPATRLPLASTDLVPN 84
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,686,497
Number of extensions: 396892
Number of successful extensions: 1400
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 1370
Number of HSP's successfully gapped: 43
Length of query: 451
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,605,545
Effective search space: 4027124115
Effective search space used: 4027124115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)