BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0229500 Os02g0229500|Os02g0229500
(348 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0229500 Kinesin, motor region domain containing protein 657 0.0
Os06g0554700 Similar to Kinesin heavy chain (Fragment) 280 1e-75
Os05g0521300 Similar to Kinesin heavy chain (Fragment) 251 8e-67
Os01g0744000 Similar to Kinesin heavy chain (Fragment) 248 4e-66
Os12g0547500 Calponin-like actin-binding domain containing ... 199 2e-51
Os03g0301800 Similar to Kinesin-like polypeptides 9 (Fragment) 192 3e-49
Os01g0243100 Similar to Kinesin 189 3e-48
Os05g0397900 Kinesin, motor region domain containing protein 125 3e-29
Os03g0114000 Similar to Kinesin 122 3e-28
Os04g0629700 Similar to Kinesin-1 (Kinesin-like protein A) 116 2e-26
Os07g0105700 Similar to Kinesin heavy chain (Fragment) 115 5e-26
Os12g0616000 Similar to Kinesin-like protein KIFC3 114 7e-26
Os03g0862200 Similar to Kinesin heavy chain (Fragment) 114 1e-25
Os12g0590500 Similar to Kinesin-like polypeptides 8 (Fragment) 88 7e-18
Os04g0666900 Similar to Kinesin-like calmodulin-binding pro... 83 3e-16
Os05g0117798 Kinesin, motor region domain containing protein 81 1e-15
Os09g0528000 Kinesin, motor region domain containing protein 80 3e-15
AK110308 80 3e-15
Os08g0558400 Similar to Kinesin heavy chain (Fragment) 78 8e-15
Os03g0152900 Kinesin, motor region domain containing protein 78 9e-15
Os03g0750200 Kinesin, motor region domain containing protein 76 3e-14
Os08g0547500 Similar to Kinesin-like protein NACK1 75 5e-14
Os02g0489800 Kinesin, motor region domain containing protein 75 8e-14
Os03g0773600 Kinesin, motor region domain containing protein 74 2e-13
Os04g0350300 Similar to Phragmoplast-associated kinesin-rel... 73 4e-13
Os04g0538800 Similar to Kinesin heavy chain (Fragment) 72 8e-13
Os09g0114500 Similar to Kinesin-like protein (Fragment) 71 1e-12
Os02g0775400 Similar to Kinesin heavy chain-like protein (F... 70 2e-12
Os05g0459400 Kinesin, motor region domain containing protein 70 2e-12
Os02g0645100 Kinesin, motor region domain containing protein 70 3e-12
Os02g0742900 Similar to Kinesin-like protein 68 1e-11
>Os02g0229500 Kinesin, motor region domain containing protein
Length = 348
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/348 (95%), Positives = 333/348 (95%)
Query: 1 MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL 60
MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL
Sbjct: 1 MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL 60
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHVNPDVSSYTETLSTL 120
VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHVNPDVSSYTETLSTL
Sbjct: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHVNPDVSSYTETLSTL 120
Query: 121 KFAERVSGVELGVARSNKEGKEGKDVKELMDQLSLLKDTISKKDEEIDRLQLLNSSTRLK 180
KFAERVSGVELGVARSNKEGKEGKDVKELMDQLSLLKDTISKKDEEIDRLQLLNSSTRLK
Sbjct: 121 KFAERVSGVELGVARSNKEGKEGKDVKELMDQLSLLKDTISKKDEEIDRLQLLNSSTRLK 180
Query: 181 PTRQADSVLKHSSSSPGITSLGKGTSVGSGAASDLDNFSDTSDRQSEAGSMLSVDPEISG 240
PTRQADSVLKHSSSSPGITSLGKGTSVGSGAASDLDNFSDTSDRQSEAGSMLSVDPEISG
Sbjct: 181 PTRQADSVLKHSSSSPGITSLGKGTSVGSGAASDLDNFSDTSDRQSEAGSMLSVDPEISG 240
Query: 241 LADVDSDGRLSDASDGISMGAEADSSVSNVADQEQEKTSNTAAKERLTRAVNRVQKLTLP 300
LADVDSDGRLSDASDGISMGAEADSSVSNVADQEQEKTSNTAAKERLTRAVNRVQKLTLP
Sbjct: 241 LADVDSDGRLSDASDGISMGAEADSSVSNVADQEQEKTSNTAAKERLTRAVNRVQKLTLP 300
Query: 301 KAGQSSSLXXXXXXXXXXXXXXXTGVRKSSTSQATPLARNNSTLKRGP 348
KAGQSSSL TGVRKSSTSQATPLARNNSTLKRGP
Sbjct: 301 KAGQSSSLRPKPRDPAPARSSAATGVRKSSTSQATPLARNNSTLKRGP 348
>Os06g0554700 Similar to Kinesin heavy chain (Fragment)
Length = 438
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/425 (45%), Positives = 233/425 (54%), Gaps = 112/425 (26%)
Query: 1 MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL 60
M PV S+S VIELM+TG +NR++ ATALNERSSRSHSVVT+H++
Sbjct: 47 MHPVNSSSDVIELMRTGLENRSVGATALNERSSRSHSVVTMHIQ---------------- 90
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH--------------- 105
GDRLKEAQHINKSL+ALGDVIFSLSQKNAH
Sbjct: 91 ---------------GDRLKEAQHINKSLSALGDVIFSLSQKNAHVPYRNSKLTQVLQNS 135
Query: 106 ------------VNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQL 153
VNPDVSSY ETLSTLKFA+RVSGVELG A++N KEGKD+KE +QL
Sbjct: 136 LGGNAKTLMFVQVNPDVSSYAETLSTLKFADRVSGVELGAAKAN---KEGKDIKEFKEQL 192
Query: 154 SLLKDTISKKDEEIDRLQLLNSSTRLKPTRQADSVLKHSSSSPG------------ITSL 201
SLLKD I+KKDEEI RLQL + +T ++ADS+LKHSSSSPG S
Sbjct: 193 SLLKDKIAKKDEEISRLQLQSHNTPRATAKRADSLLKHSSSSPGISSLGSKIQHRRTASG 252
Query: 202 GKGTSVGSGAASDLDNFSDTSDRQSEAGSML-------------------------SVDP 236
G+ VGS A SD+DNFSD SDR SEAGSM SVDP
Sbjct: 253 GRIKIVGSRAGSDVDNFSDISDRHSEAGSMQSVDDIQQSREIMGLSKLSMSEMGHNSVDP 312
Query: 237 EISGLADVDSDGRLSDASD-GISMGAEADSSVSNVAD-------------QEQEKTSNTA 282
E+ DS+GRLSD SD G+SMGAE D S+S+V + Q+++ + +
Sbjct: 313 ELPCFGYDDSEGRLSDISDSGLSMGAETDCSMSSVVELTSLPDQDRVSGTQKEQHMAPST 372
Query: 283 AKERLTRAVNRVQKLTLPKAGQSSSLXXXXXXXXXXXXXXXTGVRKSSTSQATPLARNNS 342
K+RL + R + T PK QS +L T K +QAT +RN+S
Sbjct: 373 PKDRLHKVATRASRTTTPKTPQSPTLWPKLRDPPPPRSPISTSTGKVRVTQATSSSRNSS 432
Query: 343 TLKRG 347
T KR
Sbjct: 433 TQKRW 437
>Os05g0521300 Similar to Kinesin heavy chain (Fragment)
Length = 926
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 42/336 (12%)
Query: 3 PVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVD 62
PV STS V++LM+ G NRA+ +TALNERSSRSHS++T+HVRG D+K G+T RG LHL+D
Sbjct: 565 PVKSTSDVLDLMEIGQANRAVGSTALNERSSRSHSILTVHVRGLDVKNGSTSRGCLHLID 624
Query: 63 LAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV---------------- 106
LAGSERV+RS TGDRLKEAQHINKSL+ALGDVIF+L+QKNAHV
Sbjct: 625 LAGSERVERSEATGDRLKEAQHINKSLSALGDVIFALAQKNAHVPYRNSKLTQVLQSSLG 684
Query: 107 -----------NPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQLSL 155
NPDV SY+ET+STLKFAERVSGVELG ARSN KEGKD+KEL++Q++
Sbjct: 685 GQAKTLMFVQINPDVESYSETISTLKFAERVSGVELGAARSN---KEGKDIKELLEQVAS 741
Query: 156 LKDTISKKDEEIDRLQLLNSSTRLKPTRQAD----SVLKHSSSSPGITSLGKGTSVGSGA 211
LKDTI +KD EI++LQL+ + P+ D S+ K+S+S + S+ T+
Sbjct: 742 LKDTIVRKDTEIEQLQLMKDKVK-SPSFAVDINGASMPKNSNSD--LRSVLSITTNQQSQ 798
Query: 212 ASDLDNFSDTSDRQSEAGSMLSVDPEISGLADVDSDGRLSDASDGISMGAEADSSVSNVA 271
SD ++++ +R S + P AD + + + DG S G + + A
Sbjct: 799 LSDPQSYAEV-NRDGGPTSYTDITPTCLDEADFEDNA----SEDGFSGGTDYSVGCAAGA 853
Query: 272 DQEQEKTSNTAAKERLTRAVNRVQKLTLPKAGQSSS 307
S+ A + R +R+ + +L K GQ ++
Sbjct: 854 SVFPNSCSDRTADTSIRRISSRIARFSLTKNGQPAT 889
>Os01g0744000 Similar to Kinesin heavy chain (Fragment)
Length = 971
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 154/202 (76%), Gaps = 30/202 (14%)
Query: 3 PVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVD 62
PV STS V++LM+ G NRA+ +TALNERSSRSHS++T+HVRG D+K G+T RG LHL+D
Sbjct: 646 PVKSTSDVLDLMEIGQSNRAVGSTALNERSSRSHSILTVHVRGLDVKNGSTSRGCLHLID 705
Query: 63 LAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV---------------- 106
LAGSERV+RS TGDRLKEAQHINKSL+ALGDVIFSL+QKNAHV
Sbjct: 706 LAGSERVERSEATGDRLKEAQHINKSLSALGDVIFSLAQKNAHVPYRNSKLTQVLQSSLG 765
Query: 107 -----------NPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQLSL 155
NPD+ SY+ET+STLKFAERVSGVELG ARSN +EGKD+KEL++Q++
Sbjct: 766 GQAKTLMFVQINPDIESYSETISTLKFAERVSGVELGAARSN---REGKDIKELLEQVAS 822
Query: 156 LKDTISKKDEEIDRLQLLNSST 177
LKDTI++KD EI++LQLL S +
Sbjct: 823 LKDTIARKDMEIEQLQLLKSKS 844
>Os12g0547500 Calponin-like actin-binding domain containing protein
Length = 954
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 147/215 (68%), Gaps = 30/215 (13%)
Query: 1 MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL 60
+ PVTST+ V+ELM G NRA+ +TA+N+RSSRSHS +++HV+G+ L +G LRG +HL
Sbjct: 544 IVPVTSTADVVELMNQGQKNRAVGSTAINDRSSRSHSCLSVHVQGKYLTSGAMLRGCMHL 603
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNA---------------- 104
VDLAGSERVD+S V GDRLKEAQ+INKSL+ALGDVI SL+QKN+
Sbjct: 604 VDLAGSERVDKSEVVGDRLKEAQYINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDS 663
Query: 105 -----------HVNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQL 153
HV+P++ + ET+STLKFAERV+ VELG A++NKEG E V+EL +Q+
Sbjct: 664 LGGQAKTLMFVHVSPELDAVGETISTLKFAERVASVELGAAKANKEGSE---VRELKEQI 720
Query: 154 SLLKDTISKKDEEIDRLQLLNSSTRLKPTRQADSV 188
+ LK ++KK+ E + +Q SS + ++ +++
Sbjct: 721 ATLKAALAKKEGEPENIQSTQSSPDMYRIKRGNAI 755
>Os03g0301800 Similar to Kinesin-like polypeptides 9 (Fragment)
Length = 510
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MCPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHL 60
+C V ST V+ELM G NRA+ ATALN+RSSRSHS +T+HV+G+DL +G LRG +HL
Sbjct: 64 VC-VASTMDVMELMNVGQKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHL 122
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV-------------- 106
VDLAGSERVD+S VTG+RLKEAQHINKSL+ALGDVI SL+QK+AHV
Sbjct: 123 VDLAGSERVDKSEVTGERLKEAQHINKSLSALGDVIASLAQKSAHVPYRNSKLTQLLQDS 182
Query: 107 -------------NPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQL 153
+P+ + E++STLKFAERVS VELG AR NKE E VKEL +Q+
Sbjct: 183 LGGQAKTLMFVHISPESDALGESISTLKFAERVSTVELGAARLNKESGE---VKELKEQI 239
Query: 154 SLLKDTISKKD 164
+ LK +++ KD
Sbjct: 240 ARLKSSLAMKD 250
>Os01g0243100 Similar to Kinesin
Length = 473
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 128/198 (64%), Gaps = 31/198 (15%)
Query: 2 CPVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLV 61
CPV S S VI LM G +RA S TA+N RSSRSHS++T+HV G+D+ +GN R +LHLV
Sbjct: 17 CPVQSPSDVINLMLLGEKHRASSPTAMNHRSSRSHSILTVHVNGKDM-SGNVTRSSLHLV 75
Query: 62 DLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKN------------------ 103
DLAGSERVDRS TGDRLKEAQHINKSL+ LGDVI +L+QKN
Sbjct: 76 DLAGSERVDRSEATGDRLKEAQHINKSLSCLGDVITALAQKNSHIPYRNSKLTQLLQSSL 135
Query: 104 ---------AHVNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQLS 154
AH++P+ SY ETLSTLKFA+R S VELG A +NKE E ++EL +Q+
Sbjct: 136 GGNAKTLMFAHISPEADSYVETLSTLKFAQRASCVELGTAHANKESNE---IRELKEQVE 192
Query: 155 LLKDTISKKDEEIDRLQL 172
LK ++ K+ E +L
Sbjct: 193 NLKRALAAKELEKSSFKL 210
>Os05g0397900 Kinesin, motor region domain containing protein
Length = 840
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 27/178 (15%)
Query: 3 PVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVD 62
P+ + V E ++ G NR++ AT+ NE SSRSHS+V + VR + L TG R + LVD
Sbjct: 348 PIYTIDGVWEKLKVGAKNRSVGATSANELSSRSHSLVKVTVRSEHLVTGQKWRSHIWLVD 407
Query: 63 LAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH----------------- 105
LAGSERV+++ V GDRLKE+Q INKSL+ALGDVI +L+ KNAH
Sbjct: 408 LAGSERVNKTEVEGDRLKESQFINKSLSALGDVISALASKNAHIPYRNSKLTHLLQSSLG 467
Query: 106 ----------VNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQL 153
++P + ETL +L FA RV ++ G AR + E +K++ +++
Sbjct: 468 GDCKTLMFVQISPSSADSGETLCSLNFASRVRAIDHGPARKQADPAETFKLKQMTEKI 525
>Os03g0114000 Similar to Kinesin
Length = 637
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 30/195 (15%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
V + V +++Q G + RA+ + +NE SSRSH ++ I VR ++L G R L LVDL
Sbjct: 155 VENIKEVWDVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVRAENLMNGECTRSKLWLVDL 214
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH------------------ 105
AGSER+ ++ V G+RLKEAQ+IN+SL+ALGDVI +L+ KN+H
Sbjct: 215 AGSERLAKTDVQGERLKEAQNINRSLSALGDVISALATKNSHIPYRNSKLTHLLQDSLGG 274
Query: 106 ---------VNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQLSLL 156
++P + +ETLS+L FA RV +ELG A+ + E + VK+++++
Sbjct: 275 DSKALMFVQISPSNNDVSETLSSLNFASRVRRIELGPAKKQVDTAELQKVKQMLER---A 331
Query: 157 KDTISKKDEEIDRLQ 171
K I KD+ + +L+
Sbjct: 332 KQDIRLKDDSLRKLE 346
>Os04g0629700 Similar to Kinesin-1 (Kinesin-like protein A)
Length = 788
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 27/165 (16%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
V S++ V L+ +R++ T +NE+SSRSH V T+ + G + TG ++G L+L+DL
Sbjct: 615 VFSSADVTSLLAKASQSRSVGRTQMNEQSSRSHFVFTLKISGSNENTGQQVQGVLNLIDL 674
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV----------------- 106
AGSER+ +S TGDRLKE Q INKSL+AL DVIF++++ + HV
Sbjct: 675 AGSERLAKSGSTGDRLKETQAINKSLSALSDVIFAIAKGDDHVPFRNSKLTYLLQPCLGG 734
Query: 107 ----------NPDVSSYTETLSTLKFAERVSGVELGVARSNKEGK 141
+P+ SS ET+ +L+FA RV+ E+G+ R + + +
Sbjct: 735 DSKTLMFVNISPEASSVGETICSLRFASRVNACEIGIPRRHTQAR 779
>Os07g0105700 Similar to Kinesin heavy chain (Fragment)
Length = 394
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 27/159 (16%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
V+S + V L++ +R++ T +NE SSRSH V T+ + G + T ++G L+L+DL
Sbjct: 225 VSSINEVSSLLKRAAQSRSVGRTQMNEESSRSHCVFTLRIFGVNEGTDQQVQGVLNLIDL 284
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV----------------- 106
AGSER+++S TGDRLKE Q INKSL+ L DVIFS+++K HV
Sbjct: 285 AGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIAKKEEHVPFRNSKLTYLLQPCLGG 344
Query: 107 ----------NPDVSSYTETLSTLKFAERVSGVELGVAR 135
+P+VSS E++ +L+FA RV+ E+G+ R
Sbjct: 345 DSKTLMFVNLSPEVSSTGESICSLRFAARVNSCEIGIPR 383
>Os12g0616000 Similar to Kinesin-like protein KIFC3
Length = 580
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 27/159 (16%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
VT+ + E++QTG R + +T NE SSRSH + + V+G++L G + L L+DL
Sbjct: 95 VTNMNEAWEVLQTGSKARVVGSTNANEHSSRSHCMHCVMVKGENLMNGEQTKSKLWLIDL 154
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH------------------ 105
AGSERV ++ G+RLKEAQ+INKSL+ALGDVI +L+ K+ H
Sbjct: 155 AGSERVAKTDAQGERLKEAQNINKSLSALGDVISALATKSQHIPFRNSKLTHLLQDSLSG 214
Query: 106 ---------VNPDVSSYTETLSTLKFAERVSGVELGVAR 135
++P+ + ETL +L FA RV G+ELG AR
Sbjct: 215 DSKTLMFVQISPNENDVGETLCSLNFASRVRGIELGQAR 253
>Os03g0862200 Similar to Kinesin heavy chain (Fragment)
Length = 440
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 27/159 (16%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
V S + V L++ +R++ T +NE SSRSH V T+ G + T ++G L+L+DL
Sbjct: 271 VLSINEVSSLLKRAAQSRSVGRTQMNEESSRSHCVFTLRFFGVNEGTDQQVQGVLNLIDL 330
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV----------------- 106
AGSER+++S TGDRLKE Q INKSL+ L DVIFS+++K HV
Sbjct: 331 AGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIAKKEEHVPFRNSKLTYLLQPCLGG 390
Query: 107 ----------NPDVSSYTETLSTLKFAERVSGVELGVAR 135
+P+VSS E++ +L+FA RV+ E+G+ R
Sbjct: 391 DSKTLMFVNLSPEVSSTGESICSLRFAARVNSCEIGIPR 429
>Os12g0590500 Similar to Kinesin-like polypeptides 8 (Fragment)
Length = 2815
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 102/198 (51%), Gaps = 44/198 (22%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLK-TGNTLRGA-LHLV 61
V S +I+L+ G NR ++AT +N SSRSHSV T + + K + + LR A L+LV
Sbjct: 408 VGCVSDIIKLLMQGSANRKVAATNMNRESSRSHSVFTCIIESRWEKDSASNLRFARLNLV 467
Query: 62 DLAGSE------RVDRSAVTGDRLKEAQHINKSLAALGDVIFSL------SQKN------ 103
DLAGSE R S G+RLKEA +INKSL+ LG VI SL Q++
Sbjct: 468 DLAGSERHPPEHRQRTSGAAGERLKEAANINKSLSTLGLVIMSLVDQAHGKQRHVPYRDS 527
Query: 104 -------------------AHVNPDVSSYTETLSTLKFAERVSGVE-LGVARSNKEGKEG 143
A+V+P V S +ETLSTLKFA+R ++ V + G
Sbjct: 528 RLTFLLQDSLGGNSKTMIIANVSPSVCSASETLSTLKFAQRARLIQNNAVVNEDASG--- 584
Query: 144 KDVKELMDQLSLLKDTIS 161
DV L Q+ LLK+ ++
Sbjct: 585 -DVLALQHQIRLLKEELA 601
>Os04g0666900 Similar to Kinesin-like calmodulin-binding protein-like protein
(Fragment)
Length = 1226
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVDL 63
++S + ++ G + R + T +N SSRSH +++I + +L+T + RG L VDL
Sbjct: 1019 ISSFEELRAIILRGSERRHTAGTNMNVESSRSHLILSIIIESTNLQTQSYARGKLSFVDL 1078
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV 106
AGSERV +S G +LKEAQ INKSL+AL DVI +LS H+
Sbjct: 1079 AGSERVKKSGSAGKQLKEAQSINKSLSALADVIGALSSDGQHI 1121
>Os05g0117798 Kinesin, motor region domain containing protein
Length = 1056
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 45/198 (22%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSV--VTIHVRGQDLKTGNTLR-GALHL 60
V S + +++ G R + T LN++SSRSHS+ +TIH++ + ++ G L+L
Sbjct: 240 VYSAGEIYKILDKGSAKRRTAETLLNKQSSRSHSIFSITIHIKELTHEGEEMIKIGKLNL 299
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHV-------------- 106
VDLAGSE + RS R +EA INKSL LG VI +L + + HV
Sbjct: 300 VDLAGSENISRSGARDGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDS 359
Query: 107 -------------NPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQL 153
+P V ETLSTL +A R + K +V + M +
Sbjct: 360 LGGKTKTCIIATISPSVYCLEETLSTLDYAHRAKNI-----------KNKPEVNQRMMKS 408
Query: 154 SLLKDTISKKDEEIDRLQ 171
+++KD S EIDRL+
Sbjct: 409 AVIKDLYS----EIDRLK 422
>Os09g0528000 Kinesin, motor region domain containing protein
Length = 862
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 9 HVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRG---QDLKTGN--TLRGALHLVDL 63
H++EL+ R + TA+NE SSRSH ++ + V Q L GN TL ++ VDL
Sbjct: 178 HLLELLAVCEAQRQIGETAMNEASSRSHQILRMTVESSAKQFLGKGNSSTLIACVNFVDL 237
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQ-KNAHV 106
AGSER ++A G RLKE HIN+SL LG VI LS+ +N H+
Sbjct: 238 AGSERASQTASAGMRLKEGSHINRSLLTLGKVIRQLSKGRNGHI 281
>AK110308
Length = 1224
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 37/171 (21%)
Query: 3 PVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHV--RGQDLKTGNTLR--GAL 58
PV + + + M+ G NR + +T +N SSR+H+V I + +D +G +
Sbjct: 199 PVANYAEIEARMEEGTKNRTIGSTKMNATSSRAHTVFGILFTRKAKDPGSGQEAETTSKI 258
Query: 59 HLVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLS-----QKN---------- 103
+LVDLAGSER D + TGDRLKE IN+SL+ALG+VI +L+ KN
Sbjct: 259 NLVDLAGSERADSTGATGDRLKEGCAINQSLSALGNVISTLADNAGNPKNQKFVPYRNSV 318
Query: 104 ------------------AHVNPDVSSYTETLSTLKFAERVSGVELGVARS 136
A ++P +Y ETLSTL++A+R ++ V ++
Sbjct: 319 LTRLLQDALGGNSKTIMIAALSPADVNYDETLSTLRYADRAKKIKNSVVKN 369
>Os08g0558400 Similar to Kinesin heavy chain (Fragment)
Length = 378
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 38/161 (23%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSV--VTIHVR-----GQDLKTGNTLRG 56
VT+ S + L++ G R + T LN++SSRSHS+ +TIH++ G++L G
Sbjct: 216 VTNASEIFSLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKC----G 271
Query: 57 ALHLVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH----------- 105
L+LVDLAGSE + RS R +EA INKSL LG VI +L + H
Sbjct: 272 KLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHLGHVPYRDSKLTRL 331
Query: 106 ----------------VNPDVSSYTETLSTLKFAERVSGVE 130
V+P V ETLSTL +A R ++
Sbjct: 332 LRDSLGGRTKTCIIATVSPSVHCLEETLSTLDYAHRAKSIK 372
>Os03g0152900 Kinesin, motor region domain containing protein
Length = 996
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 64/236 (27%)
Query: 9 HVIELMQTGHDNRAMSATALNERSSRSHSVVTIHV-RGQDLKTGN--------------- 52
HV +L+Q G NR + T +N SSRSH+++ IH+ R ++ G+
Sbjct: 284 HVFQLLQIGEMNRHAANTKMNTESSRSHAILIIHIQRSSRIEDGSNTSLPNGTDNLFPDN 343
Query: 53 ---TLRGALHLVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAH---- 105
L+ L +VDLAGSER+D+S G ++EA+ IN SL +LG I +L++ + H
Sbjct: 344 LPLVLKSKLLIVDLAGSERIDKSGSEGHMIEEAKFINLSLTSLGKCINALAENSPHIPTR 403
Query: 106 -----------------------VNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKE 142
+ P ++ET ST+ F +R + + R
Sbjct: 404 DSKLTRILRDSFGGTARTSLIVTIGPSSRHFSETSSTIMFGQRAMKI-VNTIR------- 455
Query: 143 GKDVKELMDQLSLLKDTISKKDE---EIDRLQLLNSSTRLKPTRQADSVLKHSSSS 195
+KE +D SL K + D E++R Q L +S ++ Q + LK S +S
Sbjct: 456 ---IKEEVDYESLYKKVEHEVDHLTSEMERQQKLKNSEKM----QLEKKLKESEAS 504
>Os03g0750200 Kinesin, motor region domain containing protein
Length = 1226
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTG-NTLRGA-LHLV 61
V++ ++ + G NR ++AT +N SSRSHSV T + + G N R + L+LV
Sbjct: 171 VSNAREAMQQLVEGAANRKVAATNMNRASSRSHSVFTCLIESKWESQGINHHRFSRLNLV 230
Query: 62 DLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVI---FSLSQKNAH------------- 105
DLAGSER S G+RLKEA +INKSL+ LG VI ++S K +H
Sbjct: 231 DLAGSERQKSSGAEGERLKEATNINKSLSTLGLVITNLIAVSNKKSHHVPYRDSKLTFLL 290
Query: 106 ---------------VNPDVSSYTETLSTLKFAERVSGV 129
++P ETLSTLKFA+R +
Sbjct: 291 QDSLGGNSKTTIIANISPSSCCAAETLSTLKFAQRAKYI 329
>Os08g0547500 Similar to Kinesin-like protein NACK1
Length = 986
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 9 HVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRG---QDLKTGN--TLRGALHLVDL 63
H+ L+ R + TALNE SSRSH ++ + + Q L GN TL ++ VDL
Sbjct: 188 HLRNLLAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVACVNFVDL 247
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQ-KNAHV 106
AGSER ++A G RLKE HIN+SL LG V+ LS+ +N H+
Sbjct: 248 AGSERASQTASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHI 291
>Os02g0489800 Kinesin, motor region domain containing protein
Length = 1055
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 27/162 (16%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQ--DLKTGN--TLRGALH 59
V + + V +L++ G NR AT N SSRSH V T ++ + +++ G+ T ++
Sbjct: 289 VFTINDVTQLLEKGLANRRTEATTANAESSRSHCVFTCFIKSESKNMEDGSNFTRTSRIN 348
Query: 60 LVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHVNPDVSSYTETLST 119
LVDLAGSER + GDRLKEA +IN+SL+ LG +ETLST
Sbjct: 349 LVDLAGSERQKLTNAAGDRLKEAGNINRSLSQLG------------------CKSETLST 390
Query: 120 LKFAERVSGVE-LGVARSNKEGKEGKDVKELMDQLSLLKDTI 160
L+FA R ++ V +E DV L +Q+ LK+ +
Sbjct: 391 LRFAHRAKDIKNNAVVNEQRED----DVNVLREQIRQLKEEL 428
>Os03g0773600 Kinesin, motor region domain containing protein
Length = 735
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 48/220 (21%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHV-RGQDLKTG-NTLRGALHLV 61
V S ++EL+ G+ R +T N SSRSH+V+ I V R Q + G LRG L LV
Sbjct: 191 VHSADKILELLNIGNSRRKTESTEANSTSSRSHAVLEITVKRKQKGQYGSQVLRGKLALV 250
Query: 62 DLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKN------------------ 103
DLAGSER + G +L++ +IN+SL AL + I +L ++N
Sbjct: 251 DLAGSERASETNNFGQKLRDGANINRSLLALANCINALGKQNKKGLAYVPYRNSKLTRIL 310
Query: 104 -------------AHVNPDVSSYTETLSTLKFAERVSGVELGVARS-NKEGKEGKDVKEL 149
A ++P Y T +TLK+A+R ++ V ++ +D K +
Sbjct: 311 KDGLSGNSRTVMVATISPADDQYHHTTNTLKYADRAKEIKTHVHKNIGHLDTHVEDYKRM 370
Query: 150 MDQL----SLLKDTISKKDEEIDRLQLLNSSTRLKPTRQA 185
+D L S LK +++K+ ++ +KPT +A
Sbjct: 371 IDNLQVEVSQLKKELAEKEHQLS----------VKPTEKA 400
>Os04g0350300 Similar to Phragmoplast-associated kinesin-related protein 1
(Fragment)
Length = 817
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 39/174 (22%)
Query: 25 ATALNERSSRSHSVVTIHVRGQ--DLKTG-NTLRGA-LHLVDLAGSERVDRSAVTGDRLK 80
AT+ N SSRSH V T ++ + +L+ G N+ R + ++LVDLAGSER + GDRLK
Sbjct: 4 ATSANADSSRSHCVFTCVIKSESKNLEDGSNSTRTSRINLVDLAGSERQKLTHAFGDRLK 63
Query: 81 EAQHINKSLAALGDVI-----FSLSQKNAH---------------------------VNP 108
EA +IN+SL+ LG++I S S K H V+P
Sbjct: 64 EAGNINRSLSQLGNLINILAEISQSGKQRHVPYRDSKLTFLLQESLGGNAKLAMICAVSP 123
Query: 109 DVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMDQLSLLKDTISK 162
S +ETLSTL+FA+R ++ A N++ +E DV L +Q+ LKD + +
Sbjct: 124 SQSCKSETLSTLRFAQRAKSIK-NNAVVNEQKEE--DVNMLREQIRQLKDELHR 174
>Os04g0538800 Similar to Kinesin heavy chain (Fragment)
Length = 945
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 8 SHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVR-------GQDLKTGNTLRGALHL 60
+H+ EL+ R T LNE SSRSH ++ + + G+D T TL +++
Sbjct: 202 NHLKELISVCEAQRKTGETYLNENSSRSHQILKLTIESSAREFLGKDKST--TLVASVNF 259
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQ-KNAHV 106
VDLAGSER ++ G RLKE HIN+SL LG VI LS+ +N H+
Sbjct: 260 VDLAGSERASQALSAGARLKEGCHINRSLLTLGTVIRKLSKVRNGHI 306
>Os09g0114500 Similar to Kinesin-like protein (Fragment)
Length = 1035
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 46/173 (26%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVR------------GQDLKTG 51
VT+ + ++ G +RA +T +N +SSRSH++ TI + G ++
Sbjct: 198 VTTQKEMTACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKADPIMTLDGMPIEEM 257
Query: 52 N--TLRGALHLVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLS-----QKNA 104
N L LHLVDLAGSER R+ G R KE HIN+ L ALG+VI +L ++ A
Sbjct: 258 NEDYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDEKKRKEGA 317
Query: 105 HVNPDVSSYT---------------------------ETLSTLKFAERVSGVE 130
HV S T ETL+TLK+A R ++
Sbjct: 318 HVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQ 370
>Os02g0775400 Similar to Kinesin heavy chain-like protein (Fragment)
Length = 547
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 47/204 (23%)
Query: 4 VTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGN----TLRGALH 59
V S +H + L+ G ++R + +T N SSRSH++ T+ V N L+
Sbjct: 246 VLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTVESSPCGESNEGEAVTFSQLN 305
Query: 60 LVDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQ-KNAH------------- 105
L+DLAGSE R+ TG R KE +INKSL LG VI L+ K H
Sbjct: 306 LIDLAGSES-SRAETTGVRRKEGSYINKSLLTLGTVISKLTDGKATHIPFRDSKLTRLLQ 364
Query: 106 --------------VNPDVSSYTETLSTLKFAERVSGVELGVARSNKEGKEGKDVKELMD 151
V P S+ ET +TLKFA R +E+ A NK ++D
Sbjct: 365 SSLSGQGRVSLICTVTPASSNSEETHNTLKFAHRAKRIEVQ-ASQNK----------IID 413
Query: 152 QLSLLK---DTISKKDEEIDRLQL 172
+ SL+K + I + EE+++L++
Sbjct: 414 EKSLIKKYQNEIRRLKEELEQLKM 437
>Os05g0459400 Kinesin, motor region domain containing protein
Length = 584
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 3 PVTSTSHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTGNTLRGALHLVD 62
PV S E+ G R ++ T LN+ SSRSH+V++I + T + ++G L+L+D
Sbjct: 179 PVRSLEEFHEIYSIGVQRRKVAHTGLNDVSSRSHAVLSIRI------TTDVVKGKLNLID 232
Query: 63 LAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQKNAHVNPDVSSYTETL 117
LAG+E R+ G RL+E+ IN+SL AL +VI +L++K + S T L
Sbjct: 233 LAGNEDNRRTCNEGIRLQESAKINQSLFALSNVISALNKKEPRIPYRESKLTRIL 287
>Os02g0645100 Kinesin, motor region domain containing protein
Length = 884
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 8 SHVIELMQTGHDNRAMSATALNERSSRSHSVVTIHVR-------GQDLKTGNTLRGALHL 60
+H+ L+ R T LNE+SSRSH ++ + V G+D T TL + +
Sbjct: 201 NHLKGLISVCEAQRRTGETFLNEKSSRSHQILRLTVESSAREFLGKDKST--TLVASANF 258
Query: 61 VDLAGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSLSQ-KNAHV 106
VDLAGSER ++ G RLKE HIN+SL ALG VI LS NAH+
Sbjct: 259 VDLAGSERASQALSAGTRLKEGCHINRSLLALGTVIRKLSMGSNAHI 305
>Os02g0742900 Similar to Kinesin-like protein
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 13 LMQTGHDNRAMSATALNERSSRSHSVVTIHVRGQDLKTG---------NTLRGALHLVDL 63
+ G +RA +T +N +SSRSH++ TI + + + + L HLVDL
Sbjct: 207 FLARGSSSRATGSTNMNSQSSRSHAIFTISMDQKKTSSASDKLSNDDYDILSSKFHLVDL 266
Query: 64 AGSERVDRSAVTGDRLKEAQHINKSLAALGDVIFSL 99
AGSER R+ G RLKE HIN+ L ALG+VI +L
Sbjct: 267 AGSERAKRTGADGLRLKEGIHINRGLLALGNVISAL 302
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.306 0.122 0.315
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,448,711
Number of extensions: 360643
Number of successful extensions: 1441
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 1400
Number of HSP's successfully gapped: 32
Length of query: 348
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 246
Effective length of database: 11,709,973
Effective search space: 2880653358
Effective search space used: 2880653358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 156 (64.7 bits)