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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0301800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin-like polypeptides 9 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.92 (0.0426) R2 : 0.374
β1 : -2.07 (0.158) R2dD : 0.254 R2D : 0.13
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.34 (0.113) R2dE : 0.215 R2E : 0.128
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.201 (0.0928) R2dN8 : 0.00904 R2N8 : 0.0111
σ : 0.792
deviance : 289.21
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 30.8
memory length : 1211
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
279.55 0.786 4.96 -2.34 0.297 1.48 1.07 -1.93 -0.21 23.8 31.02 1274 -- --
279.7 0.779 4.92 -2.03 0.304 1.27 1.06 -- -0.207 23.7 31.02 1274 -- --
283.09 0.784 4.95 -2.24 0.323 1.43 -- -1.09 -0.206 21.8 30.96 1234 -- --
283.14 0.784 4.92 -2.06 0.33 1.31 -- -- -0.206 21.9 30.87 1234 -- --
289.13 0.792 4.94 -2.29 -- 1.5 -- -1.38 -0.201 -- 30.84 1215 -- --
357.73 0.887 4.98 -1.68 0.45 -- 1.4 -- -0.45 0.258 -- -- -- --
365.24 0.895 4.98 -1.73 0.464 -- -- -- -0.454 23.1 -- -- -- --
289.21 0.792 4.92 -2.07 -- 1.34 -- -- -0.201 -- 30.8 1211 -- --
390.97 0.921 4.89 -- 0.344 1.03 -- -- -0.0449 21.7 31.84 1215 -- --
378.68 0.909 4.97 -1.72 -- -- -- -- -0.45 -- -- -- -- --
444.24 0.986 4.94 -- 0.449 -- -- -- -0.261 22.9 -- -- -- --
397.7 0.929 4.88 -- -- 1.08 -- -- -0.0376 -- 31.7 1184 -- --
456.75 0.998 4.93 -- -- -- -- -- -0.259 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 276.77 humidity 70 1440 < th dose independent rect. 18 14
2 279.25 humidity 70 1440 < th dose dependent rect. 16 17
3 279.33 humidity 50 4320 > th dose independent rect. 13 4
7 280.54 humidity 70 1440 < th dose dependent rect. 16 4
18 280.55 humidity 70 720 > th dose independent rect. 18 9
19 280.56 humidity 70 1440 < th dose independent rect. 18 2
32 281.17 temperature 30 1440 > th dose dependent sin 11 NA
37 281.49 temperature 30 1440 > th dose dependent rect. 16 3
52 281.63 temperature 30 1440 > th dose dependent rect. 16 19
75 282.10 humidity 70 1440 > th dose independent rect. 18 14
97 282.46 temperature 30 1440 > th dose dependent rect. 18 15
137 282.84 wind 1 270 < th dose dependent rect. 4 1
183 283.40 humidity 70 720 > th dose independent rect. 19 1
185 283.41 humidity 70 1440 < th dose dependent sin 12 NA
186 283.42 humidity 50 1440 > th dose independent rect. 24 17
187 283.43 humidity 50 1440 > th dose independent rect. 2 15
219 283.55 humidity 50 1440 > th dose independent rect. 21 20
220 283.56 humidity 50 1440 > th dose independent rect. 6 11
235 283.57 humidity 60 1440 < th dose independent rect. 16 17
246 283.67 humidity 50 4320 > th dose independent rect. 13 19
309 283.94 temperature 30 1440 > th dose independent rect. 17 2
323 283.94 humidity 50 4320 > th dose independent rect. 13 16
326 283.99 temperature 30 1440 > th dose dependent no NA NA
419 284.04 humidity 60 1440 < th dose independent rect. 16 4
439 284.12 humidity 50 4320 > th dose independent rect. 13 9
447 284.19 humidity 50 4320 > th dose independent rect. 13 12
449 284.21 humidity 60 1440 > th dose independent rect. 16 17
473 284.46 radiation 20 1440 > th dose independent rect. 16 16
480 284.59 temperature 30 1440 < th dose independent rect. 17 3
481 284.59 humidity 60 1440 > th dose independent rect. 16 13
483 284.62 temperature 30 1440 < th dose independent rect. 17 11
486 284.64 temperature 30 1440 < th dose independent rect. 17 7
496 284.70 temperature 30 1440 < th dose independent rect. 17 18
499 284.74 humidity 60 1440 > th dose independent rect. 16 6
520 284.76 humidity 60 1440 < th dose dependent rect. 13 6
521 284.77 humidity 60 1440 > th dose independent rect. 16 9
525 284.79 temperature 30 1440 < th dose independent rect. 17 15
544 284.88 humidity 60 1440 > th dose independent sin 13 NA
547 284.94 temperature 30 1440 > th dose independent rect. 17 18
568 285.08 humidity 60 1440 < th dose dependent rect. 13 20
587 285.24 humidity 60 1440 < th dose independent sin 13 NA
634 285.52 humidity 70 1440 > th dose independent rect. 18 11
635 285.54 wind 1 270 < th dose independent rect. 4 1
658 285.66 temperature 30 1440 < th dose independent sin 11 NA
667 285.75 humidity 70 1440 > th dose independent rect. 18 5
680 285.81 humidity 50 4320 > th dose independent sin 17 NA
691 285.91 temperature 30 1440 > th dose independent sin 11 NA
706 286.05 humidity 50 4320 < th dose independent rect. 16 22
724 286.26 humidity 50 1440 > th dose independent rect. 15 23
735 286.36 radiation 20 1440 < th dose independent rect. 16 1
786 286.72 radiation 20 1440 < th dose independent rect. 16 12
820 286.88 humidity 50 4320 < th dose dependent rect. 16 22
833 287.00 humidity 50 4320 < th dose independent rect. 11 6
888 287.23 radiation 20 1440 < th dose independent rect. 16 6
952 287.58 humidity 50 4320 > th dose independent rect. 6 23
978 287.67 humidity 50 4320 > th dose independent rect. 24 22
991 287.72 humidity 50 4320 > th dose independent rect. 2 20