FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0152900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Kinesin, motor region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.27 (0.0296) R2 : 0.00625
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.106 (0.0624) R2dN8 : 0.00807 R2N8 : 0.00625
σ : 0.558
deviance : 142.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
119.06 0.513 5.26 0.0805 0.695 0.635 -0.98 -1.65 0.253 16.1 90.88 55 -- --
122.97 0.516 5.26 0.0598 0.733 0.599 -0.169 -- 0.265 16 91.01 61 -- --
120.7 0.512 5.26 0.0479 0.723 0.67 -- -1.05 0.249 16 91 52 -- --
122.89 0.516 5.25 0.0318 0.724 0.613 -- -- 0.244 15.9 91 59 -- --
140.22 0.552 5.28 0.0861 -- 0.135 -- -0.92 0.147 -- 91.2 54 -- --
130.41 0.535 5.27 0.0858 0.466 -- -0.562 -- 0.128 16.4 -- -- -- --
131.22 0.536 5.27 0.0813 0.461 -- -- -- 0.125 16.1 -- -- -- --
142.54 0.556 5.27 0.0551 -- 0.0849 -- -- 0.127 -- 91.06 58 -- --
122.87 0.516 5.25 -- 0.726 0.608 -- -- 0.232 16 91 59 -- --
142.77 0.558 5.27 0.0627 -- -- -- -- 0.113 -- -- -- -- --
131.39 0.536 5.28 -- 0.46 -- -- -- 0.116 16.1 -- -- -- --
142.61 0.556 5.27 -- -- 0.0897 -- -- 0.122 -- 91 55 -- --
142.88 0.558 5.27 -- -- -- -- -- 0.106 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.55 temperature 25 720 > th dose independent rect. 15 4
2 115.58 radiation 1 720 > th dose independent rect. 15 3
3 115.76 humidity 90 270 > th dose dependent sin 15 NA
5 115.90 radiation 1 720 < th dose dependent rect. 16 8
6 116.08 humidity 90 270 > th dose independent rect. 16 14
14 116.39 radiation 1 720 > th dose independent rect. 15 14
16 116.41 radiation 1 720 < th dose independent rect. 16 8
32 116.65 humidity 90 270 > th dose dependent rect. 16 12
33 116.65 humidity 90 270 > th dose dependent rect. 16 14
42 116.82 atmosphere 1005 90 > th dose dependent rect. 2 1
46 116.85 humidity 90 270 > th dose dependent rect. 12 18
51 116.88 humidity 90 270 > th dose independent rect. 12 18
57 116.92 humidity 90 720 < th dose independent rect. 15 12
59 116.94 humidity 90 270 > th dose independent sin 13 NA
74 117.10 temperature 25 720 < th dose independent rect. 14 10
82 117.15 humidity 90 720 > th dose dependent rect. 18 3
89 117.20 atmosphere 1005 10 > th dose dependent rect. 2 2
116 117.42 temperature 25 720 < th dose independent sin 16 NA
144 117.71 temperature 25 720 < th dose independent rect. 12 18
182 118.03 humidity 90 720 > th dose independent rect. 17 8
196 118.08 temperature 20 720 > th dose dependent rect. 15 3
199 118.10 humidity 90 720 > th dose independent rect. 18 6
206 118.13 humidity 90 720 > th dose independent rect. 18 4
222 118.21 atmosphere 1005 90 > th dose independent rect. 2 1
224 118.22 humidity 90 720 > th dose independent rect. 19 2
273 118.42 temperature 25 270 < th dose independent rect. 17 13
279 118.45 humidity 90 720 < th dose independent rect. 24 1
299 118.54 temperature 25 270 < th dose independent sin 12 NA
300 118.54 radiation 1 14400 < th dose dependent rect. 3 1
327 118.69 atmosphere 1005 14400 < th dose independent rect. 9 1
363 118.83 temperature 25 270 > th dose independent sin 13 NA
390 118.94 humidity 80 720 < th dose independent rect. 15 2
423 119.08 temperature 25 720 > th dose independent sin 17 NA
428 119.09 atmosphere 1005 14400 > th dose independent rect. 9 1
448 119.18 temperature 25 720 < th dose independent rect. 4 20
465 119.23 temperature 10 720 > th dose dependent rect. 15 3
472 119.25 humidity 90 720 < th dose independent rect. 23 3
477 119.27 temperature 25 1440 > th dose independent rect. 11 16
478 119.27 temperature 20 90 > th dose dependent rect. 17 10
497 119.31 humidity 90 30 > th dose dependent rect. 3 23
500 119.32 humidity 90 720 > th dose dependent rect. 21 1
570 119.45 humidity 90 720 < th dose independent rect. 20 6
575 119.46 humidity 90 720 < th dose independent sin 14 NA
583 119.47 radiation 1 720 < th dose dependent sin 15 NA
634 119.57 radiation 1 720 < th dose dependent rect. 15 14
651 119.60 humidity 90 720 < th dose independent rect. 15 6
675 119.63 temperature 20 270 > th dose dependent rect. 2 12
728 119.70 temperature 30 720 < th dose dependent rect. 18 5
738 119.72 temperature 25 270 < th dose independent rect. 6 6
743 119.72 temperature 30 270 < th dose dependent rect. 17 14
788 119.78 temperature 30 1440 < th dose dependent rect. 16 5
890 119.89 temperature 25 90 < th dose dependent rect. 12 22
898 119.90 temperature 25 1440 > th dose independent rect. 18 23
932 119.93 wind 3 90 < th dose dependent rect. 2 1
962 119.95 temperature 25 1440 > th dose independent no NA NA
966 119.95 humidity 90 1440 > th dose independent rect. 12 14
980 119.96 temperature 25 1440 > th dose independent rect. 16 23
984 119.96 temperature 25 1440 < th dose independent rect. 13 23
993 119.97 temperature 25 1440 < th dose independent rect. 18 23
995 119.98 temperature 25 1440 < th dose independent no NA NA
998 119.98 humidity 90 270 < th dose independent rect. 22 10