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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0229500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Kinesin, motor region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0217) R2 : 0.00331
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0563 (0.0457) R2dN8 : 0.00428 R2N8 : 0.00331
σ : 0.409
deviance : 76.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.6 0.392 3.24 0.752 0.198 -0.665 0.0897 6.6 -0.0632 6.79 30.3 4108 -- --
71.63 0.394 3.36 0.0152 0.203 -0.395 0.205 -- -0.00248 5.9 18.43 6500 -- --
69.62 0.389 3.24 0.753 0.2 -0.677 -- 6.69 -0.0712 6.73 30.36 4105 -- --
71.43 0.394 3.35 -0.0681 0.213 -0.349 -- -- -0.0208 6.39 18 6701 -- --
71.7 0.394 3.24 0.799 -- -0.708 -- 6.99 -0.0674 -- 30.4 4104 -- --
72.61 0.399 3.37 -0.262 0.213 -- 0.108 -- -0.0886 6.58 -- -- -- --
72.64 0.399 3.37 -0.26 0.214 -- -- -- -0.089 6.54 -- -- -- --
73.8 0.4 3.36 -0.0661 -- -0.336 -- -- -0.0174 -- 18.2 6459 -- --
71.41 0.394 3.35 -- 0.218 -0.324 -- -- -0.00169 6.48 17.8 16685 -- --
75.03 0.405 3.37 -0.255 -- -- -- -- -0.0846 -- -- -- -- --
74.43 0.404 3.36 -- 0.211 -- -- -- -0.06 6.61 -- -- -- --
73.72 0.4 3.35 -- -- -0.312 -- -- -0.0068 -- 16.6 25117 -- --
76.74 0.409 3.37 -- -- -- -- -- -0.0563 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.73 temperature 20.0 30 > th dose independent rect. 2 1
2 67.73 temperature 20.0 30 > th dose dependent rect. 2 1
4 67.92 atmosphere 1005.0 30 > th dose independent rect. 2 1
5 67.92 atmosphere 1005.0 30 > th dose dependent rect. 2 1
8 67.98 wind 3.0 30 < th dose independent rect. 2 1
14 68.07 temperature 10.0 30 > th dose independent rect. 2 1
16 68.07 temperature 30.0 30 < th dose independent rect. 2 1
17 68.07 humidity 50.0 30 > th dose independent rect. 2 1
21 68.07 atmosphere 1010.0 30 < th dose independent rect. 2 1
23 68.07 radiation 1.0 30 < th dose independent rect. 2 1
28 68.07 precipitation 0.1 30 < th dose independent rect. 2 1
29 68.07 temperature 10.0 30 > th dose independent rect. 3 23
30 68.07 radiation 1.0 30 < th dose dependent rect. 2 1
35 68.07 precipitation 0.1 30 < th dose dependent rect. 2 1
36 68.08 wind 1.0 30 > th dose independent rect. 2 1
37 68.08 wind 7.0 30 < th dose dependent rect. 2 1
40 68.10 wind 1.0 4320 < th dose independent rect. 4 1
42 68.13 wind 9.0 1440 < th dose independent rect. 3 1
43 68.13 temperature 10.0 1440 > th dose independent rect. 3 1
46 68.13 temperature 30.0 1440 < th dose independent rect. 3 1
51 68.13 humidity 50.0 1440 > th dose independent rect. 3 1
60 68.13 atmosphere 995.0 1440 > th dose independent rect. 3 1
61 68.13 radiation 1.0 1440 < th dose independent rect. 3 1
81 68.13 temperature 10.0 1440 > th dose independent rect. 4 23
84 68.13 humidity 50.0 30 > th dose dependent rect. 2 1
85 68.13 radiation 1.0 1440 < th dose dependent rect. 3 1
93 68.13 radiation 20.0 43200 < th dose dependent rect. 3 1
96 68.14 wind 9.0 30 < th dose independent rect. 3 23
103 68.17 wind 1.0 4320 < th dose dependent rect. 4 1
105 68.18 wind 1.0 43200 < th dose dependent rect. 6 1
110 68.26 atmosphere 1000.0 30 > th dose independent rect. 3 23
111 68.27 atmosphere 1015.0 30 < th dose dependent rect. 2 1
115 68.44 radiation 10.0 10 > th dose independent rect. 7 1
116 68.45 wind 1.0 4320 > th dose independent rect. 4 1
117 68.49 temperature 30.0 30 < th dose dependent rect. 2 1
122 68.70 atmosphere 1000.0 30 > th dose independent rect. 18 13
124 68.72 wind 1.0 90 < th dose dependent rect. 7 3
143 68.85 radiation 10.0 90 > th dose independent rect. 7 1
149 68.91 radiation 10.0 10 > th dose dependent rect. 7 2
163 68.95 temperature 30.0 4320 > th dose independent rect. 15 1
164 68.95 wind 1.0 1440 < th dose dependent rect. 4 8
166 68.96 radiation 1.0 90 > th dose dependent rect. 7 1
167 68.96 wind 1.0 1440 < th dose dependent rect. 4 6
173 69.01 temperature 30.0 4320 < th dose independent rect. 15 1
189 69.02 wind 1.0 43200 < th dose dependent rect. 4 4
205 69.06 precipitation 0.1 10 < th dose independent rect. 18 13
207 69.06 precipitation 0.1 10 < th dose dependent rect. 18 13
208 69.06 radiation 20.0 10 < th dose dependent rect. 18 14
220 69.13 precipitation 0.1 10 < th dose independent rect. 3 23
222 69.13 precipitation 0.1 10 < th dose dependent rect. 3 23
224 69.14 temperature 30.0 1440 < th dose independent rect. 15 19
225 69.14 temperature 30.0 4320 > th dose independent rect. 14 21
226 69.14 temperature 30.0 4320 < th dose independent rect. 14 21
231 69.16 temperature 30.0 1440 > th dose independent rect. 15 19
235 69.18 wind 1.0 43200 < th dose independent rect. 4 4
268 69.21 temperature 30.0 4320 > th dose independent rect. 15 3
272 69.22 temperature 30.0 4320 < th dose independent rect. 15 3
280 69.22 temperature 30.0 4320 < th dose independent rect. 15 10
285 69.22 temperature 30.0 4320 < th dose independent rect. 15 13
303 69.24 temperature 30.0 4320 > th dose dependent rect. 15 1
314 69.27 wind 1.0 43200 < th dose independent rect. 6 1
334 69.28 wind 1.0 43200 > th dose independent rect. 4 4
392 69.35 radiation 20.0 43200 > th dose independent rect. 13 1
393 69.35 wind 1.0 90 < th dose independent rect. 7 3
400 69.37 radiation 30.0 90 > th dose dependent rect. 7 1
417 69.39 humidity 50.0 30 > th dose independent rect. 7 11
418 69.39 precipitation 0.1 720 < th dose independent rect. 3 17
419 69.39 precipitation 0.1 720 < th dose dependent rect. 3 17
422 69.42 atmosphere 995.0 720 > th dose independent rect. 8 7
424 69.43 temperature 30.0 4320 > th dose independent sin 12 NA
425 69.43 temperature 30.0 4320 < th dose independent sin 12 NA
430 69.46 radiation 10.0 10 < th dose independent rect. 18 15
492 69.59 wind 1.0 30 > th dose independent rect. 18 13
511 69.61 atmosphere 1015.0 720 < th dose independent rect. 3 17
513 69.61 wind 1.0 90 < th dose dependent rect. 9 1
526 69.64 precipitation 0.1 720 < th dose independent rect. 8 7
534 69.64 precipitation 0.1 720 < th dose dependent rect. 8 7
548 69.65 temperature 25.0 4320 > th dose independent rect. 3 1
575 69.66 radiation 30.0 1440 > th dose independent rect. 11 1
576 69.66 radiation 30.0 1440 < th dose independent rect. 11 1
580 69.66 wind 5.0 1440 < th dose dependent rect. 6 3
592 69.68 humidity 70.0 43200 > th dose dependent rect. 19 2
597 69.69 wind 9.0 720 < th dose independent rect. 20 7
600 69.69 radiation 30.0 10 > th dose dependent rect. 7 1
635 69.70 atmosphere 995.0 720 > th dose independent rect. 3 17
676 69.73 wind 1.0 4320 > th dose independent rect. 4 3
678 69.73 temperature 10.0 30 > th dose independent rect. 7 11
680 69.73 atmosphere 1015.0 30 < th dose independent rect. 7 11
681 69.73 temperature 10.0 30 > th dose independent rect. 18 13
682 69.73 humidity 50.0 30 > th dose independent rect. 18 13
691 69.74 precipitation 0.1 30 < th dose independent rect. 7 11
692 69.74 wind 9.0 30 < th dose independent rect. 18 13
694 69.74 wind 1.0 14400 < th dose dependent rect. 22 4
696 69.74 precipitation 0.1 30 < th dose dependent rect. 7 11
697 69.74 wind 1.0 720 < th dose dependent rect. 4 17
706 69.76 wind 1.0 1440 > th dose dependent rect. 6 3
709 69.76 temperature 25.0 4320 > th dose dependent rect. 2 6
713 69.77 precipitation 0.1 720 < th dose independent rect. 20 7
718 69.77 wind 9.0 14400 > th dose dependent rect. 13 1
721 69.77 precipitation 0.1 720 < th dose dependent rect. 20 7
727 69.78 wind 1.0 1440 < th dose independent rect. 4 6
753 69.79 temperature 30.0 4320 > th dose independent rect. 17 23
758 69.80 radiation 10.0 4320 > th dose independent rect. 8 1
759 69.80 wind 3.0 1440 < th dose independent rect. 7 2
766 69.80 wind 1.0 1440 > th dose independent rect. 4 7
779 69.80 temperature 20.0 30 > th dose dependent rect. 21 6
796 69.82 temperature 30.0 4320 > th dose independent rect. 8 8
820 69.82 temperature 30.0 4320 > th dose dependent sin 13 NA
823 69.82 humidity 90.0 90 < th dose dependent rect. 7 1
825 69.82 wind 1.0 720 < th dose dependent rect. 4 15
828 69.83 temperature 30.0 4320 > th dose independent no NA NA
829 69.83 wind 1.0 10 < th dose independent rect. 7 3
970 69.83 temperature 25.0 90 > th dose dependent rect. 20 12
983 69.84 temperature 10.0 720 > th dose independent rect. 20 7
984 69.84 temperature 30.0 720 < th dose independent rect. 20 7
985 69.84 humidity 50.0 720 > th dose independent rect. 20 7
988 69.84 atmosphere 995.0 720 > th dose independent rect. 20 7
989 69.84 radiation 1.0 720 < th dose independent rect. 20 7
994 69.84 temperature 10.0 720 > th dose independent rect. 3 17
997 69.84 wind 1.0 14400 < th dose dependent rect. 23 2
1000 69.84 radiation 1.0 720 < th dose dependent rect. 20 7