Os03g0862200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin heavy chain (Fragment).
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Os03g0862200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin heavy chain (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.99 | 0.293 | 8.91 | -1.73 | 0.301 | 0.286 | 0.274 | -3.93 | -0.0485 | 20.8 | 26.41 | 4659 | -- | -- |
| 42.44 | 0.306 | 8.79 | -0.83 | 0.324 | -0.221 | 0.142 | -- | 0.127 | 19.6 | 26.41 | 4659 | -- | -- |
| 39.2 | 0.292 | 8.91 | -1.74 | 0.302 | 0.295 | -- | -3.96 | -0.0454 | 20.5 | 26.54 | 4651 | -- | -- |
| 41.61 | 0.302 | 8.8 | -0.837 | 0.329 | -0.429 | -- | -- | 0.107 | 19.7 | 29.64 | 4030 | -- | -- |
| 44.34 | 0.31 | 8.9 | -1.8 | -- | 0.356 | -- | -4.2 | -0.0514 | -- | 26.7 | 4743 | -- | -- |
| 43.11 | 0.308 | 8.79 | -0.856 | 0.305 | -- | 0.237 | -- | 0.121 | 20.6 | -- | -- | -- | -- |
| 43.27 | 0.308 | 8.79 | -0.863 | 0.308 | -- | -- | -- | 0.121 | 20.3 | -- | -- | -- | -- |
| 47.35 | 0.322 | 8.79 | -0.847 | -- | -0.341 | -- | -- | 0.105 | -- | 29.64 | 4030 | -- | -- |
| 58.96 | 0.358 | 8.77 | -- | 0.353 | -0.386 | -- | -- | 0.241 | 20.8 | 25.05 | 3954 | -- | -- |
| 48.51 | 0.325 | 8.79 | -0.865 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 62.9 | 0.371 | 8.77 | -- | 0.312 | -- | -- | -- | 0.218 | 20.1 | -- | -- | -- | -- |
| 52.94 | 0.339 | 8.72 | -- | -- | -0.579 | -- | -- | 0.426 | -- | 20.18 | 47520 | -- | -- |
| 68.25 | 0.386 | 8.76 | -- | -- | -- | -- | -- | 0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.48 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 4 | 38.62 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 12 | 38.71 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 15 | 38.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 21 | 38.74 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 3 | NA |
| 45 | 38.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 46 | 38.98 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 47 | 38.98 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 53 | 39.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 57 | 39.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 58 | 39.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 74 | 39.07 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 76 | 39.07 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 92 | 39.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 93 | 39.10 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 110 | 39.13 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 130 | 39.17 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 167 | 39.23 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 168 | 39.23 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 177 | 39.25 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 198 | 39.27 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 200 | 39.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 209 | 39.29 | temperature | 30.0 | 270 | < th | dose independent | sin | 6 | NA |
| 211 | 39.29 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 220 | 39.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 221 | 39.30 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 225 | 39.31 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 8 | NA |
| 231 | 39.31 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 233 | 39.32 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 235 | 39.32 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 250 | 39.34 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 255 | 39.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 259 | 39.35 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 23 | 17 |
| 276 | 39.36 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 285 | 39.38 | temperature | 25.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 286 | 39.38 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 302 | 39.40 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 20 | 17 |
| 334 | 39.44 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 342 | 39.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 353 | 39.46 | temperature | 30.0 | 270 | > th | dose independent | sin | 4 | NA |
| 389 | 39.49 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 391 | 39.50 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 396 | 39.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 397 | 39.50 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 402 | 39.50 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 405 | 39.51 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 409 | 39.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 432 | 39.51 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 15 |
| 433 | 39.51 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 22 | 19 |
| 434 | 39.52 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 447 | 39.53 | atmosphere | 1000.0 | 90 | < th | dose independent | sin | 2 | NA |
| 481 | 39.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 482 | 39.55 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 494 | 39.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 495 | 39.55 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 502 | 39.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 539 | 39.58 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 20 | 19 |
| 540 | 39.58 | wind | 1.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 548 | 39.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 558 | 39.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 566 | 39.60 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 10 |
| 574 | 39.60 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 578 | 39.60 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 588 | 39.61 | radiation | 20.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 603 | 39.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 615 | 39.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 625 | 39.62 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 630 | 39.63 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 634 | 39.63 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 5 |
| 648 | 39.63 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 681 | 39.65 | atmosphere | 1000.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 691 | 39.66 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 706 | 39.66 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 717 | 39.67 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 729 | 39.67 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 738 | 39.67 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 4 | 13 |
| 753 | 39.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 754 | 39.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 759 | 39.68 | atmosphere | 1000.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 762 | 39.68 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 806 | 39.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 816 | 39.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 838 | 39.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 862 | 39.71 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 863 | 39.71 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 882 | 39.72 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 896 | 39.72 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 898 | 39.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 899 | 39.72 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 923 | 39.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 22 |
| 926 | 39.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 932 | 39.73 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 941 | 39.73 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 1 | 7 |
| 948 | 39.73 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 953 | 39.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 955 | 39.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 990 | 39.74 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 992 | 39.74 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 8 |