Os02g0645100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os02g0645100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.4 | 0.405 | 9.94 | 1.1 | 0.55 | 2.22 | 0.813 | 2.25 | 0.61 | 6.14 | 1.08 | 14433 | -- | -- |
| 76 | 0.406 | 10 | 0.535 | 0.768 | 2.24 | 0.861 | -- | 0.396 | 5.08 | 1.453 | 16200 | -- | -- |
| 75.81 | 0.406 | 9.93 | 1.11 | 0.563 | 2.23 | -- | 2.3 | 0.602 | 6.56 | 1.06 | 14423 | -- | -- |
| 77.45 | 0.41 | 10 | 0.523 | 0.923 | 2.32 | -- | -- | 0.392 | 5.45 | 1.39 | 16311 | -- | -- |
| 91.91 | 0.447 | 9.93 | 1.16 | -- | 2.26 | -- | 2.41 | 0.632 | -- | 1.06 | 14430 | -- | -- |
| 167.94 | 0.608 | 9.88 | 1.34 | 0.581 | -- | 0.986 | -- | 1.06 | 5.92 | -- | -- | -- | -- |
| 170.1 | 0.611 | 9.88 | 1.35 | 0.589 | -- | -- | -- | 1.06 | 6.31 | -- | -- | -- | -- |
| 98.1 | 0.461 | 9.99 | 0.281 | -- | 2.33 | -- | -- | 0.235 | -- | 0.8633 | 24527 | -- | -- |
| 82.29 | 0.422 | 9.99 | -- | 1 | 2.6 | -- | -- | 0.342 | 5.49 | 1.219 | 16373 | -- | -- |
| 188.12 | 0.641 | 9.89 | 1.36 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 217.91 | 0.691 | 9.91 | -- | 0.608 | -- | -- | -- | 0.909 | 6.19 | -- | -- | -- | -- |
| 92.63 | 0.448 | 10 | -- | -- | 2.17 | -- | -- | 0.313 | -- | 0.93 | 24503 | -- | -- |
| 237.1 | 0.719 | 9.92 | -- | -- | -- | -- | -- | 0.921 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 66.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 13 | 66.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 27 | 67.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 28 | 67.57 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 31 | 67.58 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 47 | 68.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 53 | 68.16 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 72 | 68.64 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 114 | 69.36 | radiation | 1 | 43200 | > th | dose independent | sin | 14 | NA |
| 121 | 69.39 | radiation | 1 | 43200 | < th | dose independent | sin | 14 | NA |
| 197 | 70.03 | radiation | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 202 | 70.11 | temperature | 10 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 203 | 70.13 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 210 | 70.24 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 213 | 70.26 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 235 | 70.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 238 | 70.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 245 | 70.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 274 | 70.58 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 290 | 70.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 314 | 70.70 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 317 | 70.72 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 340 | 70.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 402 | 70.86 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 21 |
| 436 | 70.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 438 | 70.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 484 | 71.05 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 513 | 71.12 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 562 | 71.19 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 567 | 71.20 | temperature | 25 | 43200 | < th | dose dependent | sin | 6 | NA |
| 628 | 71.28 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 779 | 71.47 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 822 | 71.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 829 | 71.53 | radiation | 1 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 856 | 71.56 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 865 | 71.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 15 |
| 888 | 71.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 20 |
| 906 | 71.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 22 | 22 |
| 917 | 71.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 925 | 71.57 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 926 | 71.57 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 986 | 71.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 989 | 71.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 990 | 71.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 14 |