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Os08g0547500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin-like protein NACK1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0492) R2 : 0.55
β1 : -3.1 (0.184) R2dD : 0.305 R2D : 0.181
β2 : 0.95 (0.119) R2dC : 0.0648 R2C : 0.105
β3 : 2.34 (0.15) R2dE : 0.26 R2E : 0.181
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0388 (0.105) R2dN8 : 0.000179 R2N8 : 0.00183
σ : 0.918
deviance : 388.76
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C
peak time of C : 22.7
E
wheather : temperature
threshold : 26.09
memory length : 1114
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.13
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
374.52 0.909 9.82 -4.6 0.982 3.08 1.18 -7.71 -0.199 23.1 26.27 1154 8.13 --
385.49 0.914 9.64 -3.06 0.954 2.32 0.889 -- 0.0442 22.9 26.1 1114 8.03 --
380.05 0.908 9.81 -4.61 0.973 3.1 -- -7.48 -0.188 22.8 26.3 1151 8.13 --
388.76 0.918 9.64 -3.1 0.95 2.34 -- -- 0.0388 22.7 26.09 1114 8.13 --
422.44 0.957 9.79 -4.49 -- 3.39 -- -6.88 -0.371 -- 25.47 1010 8.79 --
571.72 1.12 9.64 -2.45 1.35 -- 1.59 -- 0.0245 0.402 -- -- -- --
582.45 1.13 9.64 -2.51 1.34 -- -- -- 0.018 0.247 -- -- -- --
429.4 0.965 9.66 -3.19 -- 2.71 -- -- -0.177 -- 24.95 1011 9.64 --
628.48 1.17 9.56 -- 0.961 1.82 -- -- 0.447 23 26.56 1084 7.57 --
696.13 1.23 9.62 -2.46 -- -- -- -- 0.0386 -- -- -- -- --
747.91 1.28 9.58 -- 1.31 -- -- -- 0.297 0.145 -- -- -- --
676.29 1.21 9.58 -- -- 2.26 -- -- 0.296 -- 25.5 928 7.77 --
855.93 1.37 9.55 -- -- -- -- -- 0.312 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 395.88 temperature 25 1440 > th dose dependent rect. 13 11
3 396.01 temperature 25 1440 > th dose dependent rect. 13 19
12 396.61 radiation 10 1440 < th dose dependent rect. 18 10
33 397.27 temperature 25 1440 > th dose dependent sin 15 NA
95 400.38 temperature 25 1440 > th dose dependent rect. 16 1
115 401.58 temperature 25 1440 > th dose dependent rect. 18 1
123 402.11 humidity 90 43200 > th dose dependent rect. 22 1
125 402.25 humidity 90 43200 > th dose dependent rect. 20 3
158 403.93 temperature 30 1440 < th dose independent sin 14 NA
164 404.24 radiation 1 1440 < th dose dependent rect. 18 1
182 405.02 temperature 30 1440 > th dose independent sin 14 NA
198 405.33 humidity 90 43200 > th dose dependent rect. 18 6
200 405.40 radiation 20 14400 > th dose dependent rect. 16 15
201 405.40 temperature 25 1440 > th dose dependent rect. 6 18
212 405.56 temperature 30 1440 < th dose independent rect. 13 15
222 405.60 temperature 30 1440 < th dose independent rect. 13 18
246 405.73 temperature 25 1440 > th dose dependent no NA NA
248 405.76 temperature 30 1440 < th dose independent rect. 13 6
263 405.89 humidity 70 14400 < th dose independent rect. 18 13
264 405.91 temperature 30 1440 < th dose independent rect. 13 9
281 406.10 temperature 25 14400 > th dose dependent rect. 17 13
288 406.18 temperature 25 14400 > th dose independent rect. 23 1
293 406.28 temperature 25 1440 > th dose dependent rect. 21 23
302 406.38 wind 5 43200 > th dose independent rect. 11 1
309 406.43 temperature 30 1440 > th dose independent rect. 15 4
338 406.67 temperature 25 1440 > th dose dependent rect. 18 23
341 406.73 humidity 70 14400 < th dose independent rect. 18 2
361 406.87 wind 3 43200 > th dose dependent rect. 11 1
378 407.03 wind 5 43200 > th dose dependent rect. 10 4
387 407.18 humidity 90 43200 > th dose independent rect. 21 1
403 407.35 humidity 70 14400 < th dose independent rect. 18 4
454 407.94 temperature 30 14400 > th dose independent rect. 12 1
466 408.00 wind 5 43200 < th dose independent rect. 11 1
472 408.09 temperature 30 14400 < th dose independent rect. 12 1
477 408.13 radiation 20 14400 > th dose dependent rect. 16 1
499 408.24 humidity 80 1440 < th dose dependent rect. 18 1
535 408.80 temperature 25 14400 > th dose dependent sin 13 NA
544 408.93 wind 7 43200 > th dose independent rect. 10 3
545 408.97 temperature 30 14400 < th dose independent sin 14 NA
549 409.05 temperature 30 14400 < th dose independent rect. 11 16
552 409.08 temperature 30 14400 < th dose independent rect. 11 14
555 409.08 temperature 30 14400 < th dose independent rect. 11 20
557 409.09 temperature 30 14400 < th dose independent rect. 11 8
563 409.10 wind 7 43200 > th dose independent rect. 24 14
573 409.19 temperature 30 14400 > th dose independent sin 14 NA
576 409.20 wind 7 43200 < th dose independent rect. 3 11
579 409.25 wind 7 43200 < th dose independent rect. 10 3
581 409.26 wind 7 43200 < th dose independent rect. 24 14
591 409.32 wind 7 43200 > th dose independent rect. 8 6
592 409.34 wind 7 43200 < th dose independent rect. 8 6
594 409.35 temperature 25 14400 > th dose dependent rect. 18 2
596 409.38 temperature 30 14400 > th dose independent rect. 11 8
610 409.39 wind 7 43200 > th dose independent rect. 3 11
616 409.43 temperature 25 14400 < th dose independent rect. 23 2
635 409.55 temperature 30 14400 < th dose independent rect. 16 11
658 409.63 temperature 30 14400 < th dose independent rect. 16 15
663 409.67 temperature 30 14400 < th dose independent rect. 16 3
672 409.74 temperature 25 14400 > th dose dependent rect. 22 1
673 409.74 radiation 20 1440 < th dose dependent rect. 17 13
723 409.89 temperature 30 14400 > th dose independent rect. 16 3
777 410.24 temperature 30 1440 < th dose independent rect. 17 23
810 410.40 temperature 30 14400 < th dose independent rect. 11 4
848 410.60 temperature 30 14400 > th dose independent rect. 11 4
918 410.89 humidity 90 43200 < th dose independent rect. 21 1
930 410.97 temperature 30 1440 < th dose independent rect. 23 20
938 410.98 temperature 30 1440 < th dose independent rect. 21 22
953 411.01 temperature 30 1440 < th dose independent rect. 6 22
978 411.09 temperature 30 1440 < th dose independent no NA NA
982 411.10 temperature 25 14400 > th dose independent rect. 19 11
989 411.11 temperature 30 1440 < th dose independent rect. 2 23
994 411.13 temperature 30 1440 < th dose independent rect. 6 13