Os05g0397900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0397900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Kinesin, motor region domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.93 | 0.472 | 5.74 | -0.503 | 0.736 | 1.31 | -0.847 | -0.782 | -0.143 | 4.94 | 17.8 | 959 | 3.03 | 4.41 |
| 101.31 | 0.469 | 5.73 | -0.317 | 0.716 | 1.3 | -0.646 | -- | -0.117 | 5.17 | 19.27 | 946 | 3.03 | 4.52 |
| 101.76 | 0.47 | 5.73 | -0.457 | 0.676 | 1.31 | -- | -0.602 | -0.145 | 5.24 | 19.34 | 941 | 3.03 | 4.32 |
| 102.26 | 0.471 | 5.73 | -0.32 | 0.685 | 1.29 | -- | -- | -0.11 | 5.2 | 19.33 | 957 | 3.03 | 4.28 |
| 119.79 | 0.51 | 5.73 | -0.544 | -- | 1.39 | -- | -0.61 | -0.135 | -- | 19.36 | 1929 | 3 | 4.3 |
| 155.79 | 0.585 | 5.64 | -0.016 | 0.617 | -- | -0.256 | -- | 0.239 | 8.96 | -- | -- | -- | -- |
| 155.99 | 0.585 | 5.64 | -0.0238 | 0.616 | -- | -- | -- | 0.239 | 9.1 | -- | -- | -- | -- |
| 117.66 | 0.505 | 5.73 | -0.412 | -- | 1.54 | -- | -- | -0.108 | -- | 16.63 | 1910 | 3.11 | 3.58 |
| 104.82 | 0.477 | 5.73 | -- | 0.663 | 1.24 | -- | -- | -0.082 | 5.34 | 19.3 | 960 | 3.03 | 4.23 |
| 177.86 | 0.623 | 5.65 | -0.0253 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 156 | 0.584 | 5.64 | -- | 0.616 | -- | -- | -- | 0.242 | 9.1 | -- | -- | -- | -- |
| 121.69 | 0.514 | 5.73 | -- | -- | 1.41 | -- | -- | -0.0647 | -- | 16.81 | 1906 | 3.25 | 3.15 |
| 177.88 | 0.623 | 5.65 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 4 | 114.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 9 | 114.72 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 15 | 115.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 16 | 115.49 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 26 | 115.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 31 | 116.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 42 | 116.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 79 | 117.42 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 5 |
| 84 | 117.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 157 | 119.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 160 | 119.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 168 | 119.54 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 187 | 119.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 188 | 119.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 214 | 119.98 | temperature | 30 | 90 | < th | dose independent | rect. | 9 | 18 |
| 284 | 120.70 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 346 | 121.41 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 21 |
| 353 | 121.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 374 | 121.72 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 410 | 121.97 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 6 |
| 443 | 122.13 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 464 | 122.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 14 |
| 539 | 122.62 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 569 | 122.74 | temperature | 30 | 90 | < th | dose independent | rect. | 11 | 16 |
| 632 | 123.01 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 687 | 123.20 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 793 | 123.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 914 | 123.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 919 | 123.73 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 928 | 123.74 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |