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Os05g0521300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin heavy chain (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.74 (0.0372) R2 : 0.559
β1 : -1.61 (0.136) R2dD : 0.138 R2D : 0.14
β2 : 1.2 (0.0923) R2dC : 0.17 R2C : 0.23
β3 : 1.2 (0.114) R2dE : 0.114 R2E : 0.178
β4 : 2.6 (0.361) R2dD*C : 0.0505 R2D*C : 0.0412
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.258 (0.0804) R2dN8 : 0.0137 R2N8 : 0.0352
σ : 0.694
deviance : 221.91
__
_____
C
peak time of C : 14.2
E
wheather : radiation
threshold : 0.19
memory length : 117
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 6.29
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
221.82 0.7 8.73 -1.62 1.2 1.2 2.62 -0.26 0.257 14.2 0.1803 117 6.32 --
221.91 0.694 8.74 -1.61 1.2 1.2 2.6 -- 0.258 14.2 0.19 117 6.29 --
246.33 0.731 8.73 -1.46 1.2 1.19 -- 0.504 0.289 14.4 0.2106 117 6.16 --
246.79 0.732 8.73 -1.51 1.23 1.24 -- -- 0.269 14.6 0.22 117 6.07 --
320.45 0.834 8.71 -1.55 -- 1.77 -- 0.359 0.303 -- 0.53 133 6.87 --
275.1 0.778 8.7 -1.51 1.4 -- 2.69 -- 0.407 14.2 -- -- -- --
302.27 0.814 8.69 -1.44 1.4 -- -- -- 0.423 14.2 -- -- -- --
320.61 0.834 8.72 -1.61 -- 1.81 -- -- 0.261 -- 0.5307 134 6.93 --
307.72 0.817 8.73 -- 1.26 1.17 -- -- 0.42 14.5 0.2101 117 6.04 --
419.82 0.957 8.7 -1.49 -- -- -- -- 0.39 -- -- -- -- --
356.58 0.883 8.66 -- 1.43 -- -- -- 0.583 14.2 -- -- -- --
387.39 0.917 8.7 -- -- 1.75 -- -- 0.433 -- 0.57 128 6.96 --
478.73 1.02 8.67 -- -- -- -- -- 0.555 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 220.84 radiation 30.0 90 < th dose dependent rect. 5 14
2 221.82 radiation 20.0 90 < th dose independent rect. 5 14
5 223.84 humidity 90.0 10 < th dose dependent rect. 8 6
6 224.15 humidity 90.0 10 < th dose dependent rect. 8 8
7 224.22 radiation 10.0 90 > th dose independent rect. 8 6
12 224.94 humidity 90.0 30 < th dose dependent rect. 8 4
18 225.51 humidity 80.0 30 < th dose independent rect. 8 4
20 226.14 radiation 1.0 90 < th dose dependent rect. 19 11
22 226.28 radiation 30.0 10 < th dose dependent rect. 6 14
23 226.30 humidity 80.0 10 < th dose independent rect. 8 6
28 226.80 radiation 20.0 90 < th dose dependent rect. 5 12
30 227.29 humidity 80.0 90 > th dose independent rect. 5 6
34 227.47 humidity 80.0 90 > th dose independent rect. 5 10
39 227.84 radiation 20.0 30 > th dose independent rect. 15 21
40 227.87 humidity 80.0 10 > th dose independent rect. 6 4
41 228.02 radiation 1.0 90 < th dose independent rect. 19 11
67 228.53 radiation 10.0 270 < th dose dependent rect. 3 11
70 228.59 humidity 80.0 10 < th dose independent rect. 8 8
75 228.67 radiation 1.0 30 > th dose dependent rect. 8 4
79 228.83 radiation 1.0 90 > th dose independent sin 12 NA
87 229.05 radiation 40.0 10 < th dose dependent rect. 6 2
93 229.17 radiation 1.0 90 < th dose dependent sin 12 NA
98 229.36 radiation 10.0 10 > th dose independent rect. 8 8
104 229.60 radiation 1.0 90 > th dose independent rect. 16 16
107 229.69 radiation 20.0 90 < th dose independent rect. 5 3
112 229.80 humidity 80.0 90 > th dose dependent rect. 5 10
113 229.83 radiation 1.0 90 > th dose independent rect. 12 20
120 230.00 radiation 40.0 90 < th dose independent rect. 5 14
123 230.10 humidity 60.0 10 > th dose dependent rect. 6 2
138 230.56 radiation 20.0 30 > th dose independent rect. 15 23
139 230.59 radiation 10.0 90 > th dose independent sin 2 NA
141 230.59 humidity 70.0 10 > th dose dependent rect. 6 4
142 230.60 radiation 10.0 270 < th dose independent rect. 3 5
156 230.88 radiation 10.0 270 < th dose dependent rect. 3 8
158 230.95 radiation 20.0 90 < th dose dependent rect. 5 5
164 230.98 humidity 90.0 90 < th dose dependent sin 4 NA
182 231.02 humidity 60.0 90 > th dose dependent rect. 5 14
183 231.02 humidity 50.0 10 > th dose dependent rect. 6 14
186 231.06 humidity 70.0 90 > th dose dependent rect. 5 6
211 231.22 humidity 80.0 10 < th dose independent rect. 2 12
215 231.25 humidity 90.0 90 < th dose dependent rect. 2 11
228 231.40 radiation 10.0 270 < th dose dependent rect. 17 10
233 231.48 humidity 80.0 90 < th dose independent rect. 3 9
239 231.56 humidity 50.0 270 > th dose independent rect. 17 10
242 231.60 temperature 10.0 30 > th dose dependent rect. 12 20
283 231.95 humidity 80.0 90 < th dose independent sin 4 NA
287 231.95 temperature 15.0 30 > th dose dependent rect. 5 3
300 232.06 radiation 20.0 90 < th dose independent rect. 12 20
312 232.19 radiation 10.0 270 < th dose dependent rect. 3 5
313 232.20 temperature 15.0 270 > th dose independent rect. 7 5
325 232.34 humidity 80.0 10 < th dose independent sin 3 NA
327 232.39 radiation 20.0 90 < th dose independent rect. 12 23
347 232.53 radiation 10.0 270 < th dose independent rect. 17 10
352 232.55 radiation 1.0 90 < th dose independent sin 12 NA
385 232.79 radiation 20.0 10 < th dose dependent rect. 6 11
403 232.87 radiation 10.0 10 < th dose dependent rect. 20 10
414 232.98 temperature 15.0 270 > th dose independent rect. 8 3
427 233.06 temperature 30.0 270 < th dose independent rect. 17 10
449 233.23 radiation 10.0 30 > th dose dependent rect. 15 21
458 233.27 wind 5.0 90 < th dose independent rect. 5 3
482 233.36 temperature 20.0 90 > th dose independent rect. 5 3
496 233.43 radiation 10.0 270 > th dose independent sin 6 NA
500 233.45 atmosphere 995.0 270 > th dose independent rect. 17 10
509 233.50 radiation 1.0 30 > th dose independent rect. 5 3
550 233.60 temperature 10.0 10 > th dose dependent rect. 14 18
557 233.66 temperature 10.0 270 > th dose independent rect. 17 10
561 233.66 temperature 10.0 270 > th dose independent rect. 3 14
562 233.66 atmosphere 1015.0 270 < th dose independent rect. 3 14
567 233.68 precipitation 0.1 270 < th dose independent rect. 3 14
568 233.68 precipitation 0.1 270 < th dose dependent rect. 3 14
587 233.78 humidity 70.0 90 > th dose independent rect. 19 10
611 233.86 humidity 70.0 10 > th dose independent rect. 6 2
641 234.00 wind 9.0 90 < th dose independent rect. 8 21
654 234.08 wind 9.0 270 < th dose independent rect. 17 10
657 234.11 wind 9.0 10 < th dose independent rect. 8 22
668 234.26 precipitation 0.1 90 < th dose independent rect. 5 3
669 234.26 precipitation 0.1 90 < th dose dependent rect. 5 3
671 234.27 temperature 10.0 90 > th dose independent rect. 5 3
673 234.27 temperature 30.0 90 < th dose independent rect. 5 3
674 234.27 humidity 50.0 90 > th dose independent rect. 5 3
676 234.27 atmosphere 995.0 90 > th dose independent rect. 5 3
677 234.27 atmosphere 1015.0 90 < th dose independent rect. 5 3
678 234.27 temperature 10.0 90 > th dose independent rect. 8 21
681 234.28 wind 9.0 10 < th dose dependent rect. 6 2
684 234.29 precipitation 0.1 90 < th dose independent rect. 5 14
686 234.29 precipitation 0.1 90 < th dose dependent rect. 5 14
688 234.30 wind 9.0 270 < th dose independent rect. 3 14
689 234.30 wind 9.0 90 < th dose dependent rect. 5 3
733 234.51 radiation 20.0 30 > th dose independent rect. 13 23
736 234.54 temperature 10.0 90 > th dose independent rect. 19 10
737 234.54 temperature 30.0 90 < th dose independent rect. 19 10
738 234.54 humidity 50.0 90 > th dose independent rect. 19 10
740 234.54 atmosphere 995.0 90 > th dose independent rect. 19 10
744 234.54 temperature 10.0 90 > th dose independent rect. 5 14
745 234.54 atmosphere 1015.0 90 < th dose independent rect. 5 14
771 234.66 wind 5.0 10 < th dose independent rect. 6 2
773 234.66 wind 9.0 90 < th dose independent rect. 19 10
776 234.67 temperature 10.0 10 > th dose independent rect. 6 2
778 234.67 temperature 30.0 10 < th dose independent rect. 6 2
779 234.67 humidity 50.0 10 > th dose independent rect. 6 2
781 234.67 atmosphere 995.0 10 > th dose independent rect. 6 2
782 234.67 atmosphere 1015.0 10 < th dose independent rect. 6 2
783 234.67 temperature 10.0 10 > th dose independent rect. 8 22
789 234.71 temperature 20.0 30 > th dose independent rect. 8 4
829 234.86 radiation 20.0 10 < th dose dependent rect. 6 8
834 234.88 humidity 70.0 10 > th dose dependent rect. 6 11
854 234.98 wind 5.0 270 < th dose independent rect. 3 4
856 234.99 precipitation 0.1 10 < th dose independent rect. 6 2
857 234.99 precipitation 0.1 10 < th dose dependent rect. 6 2
906 235.18 wind 9.0 90 < th dose independent rect. 5 14
908 235.18 radiation 20.0 90 < th dose independent rect. 21 23
913 235.19 temperature 10.0 30 > th dose dependent rect. 8 4
920 235.21 wind 1.0 30 > th dose independent rect. 6 2
940 235.27 humidity 70.0 10 > th dose dependent rect. 6 8
941 235.28 atmosphere 995.0 10 > th dose dependent rect. 6 2
951 235.33 radiation 10.0 30 > th dose dependent rect. 13 23
953 235.34 temperature 10.0 270 > th dose dependent rect. 3 4
1000 235.52 humidity 50.0 270 > th dose dependent rect. 3 4