Os12g0590500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin-like polypeptides 8 (Fragment).
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Os12g0590500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin-like polypeptides 8 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.7 | 0.303 | 3.06 | -0.0482 | 0.0599 | -0.949 | -0.298 | 3.22 | -0.0512 | 5.68 | 50.2 | 8 | -- | -- |
| 44.73 | 0.311 | 3.05 | -0.0614 | 0.068 | -0.474 | -0.194 | -- | -0.0636 | 5.91 | 51 | 6 | -- | -- |
| 41.37 | 0.3 | 3.06 | -0.041 | 0.0541 | -0.899 | -- | 3.03 | -0.0514 | 6.12 | 50 | 6 | -- | -- |
| 44.84 | 0.312 | 3.05 | -0.0633 | 0.0666 | -0.482 | -- | -- | -0.0563 | 6.43 | 52 | 6 | -- | -- |
| 41.56 | 0.3 | 3.06 | -0.041 | -- | -0.891 | -- | 3.02 | -0.0472 | -- | 50.14 | 6 | -- | -- |
| 47.41 | 0.323 | 3.06 | -0.0521 | 0.0639 | -- | -0.31 | -- | -0.0758 | 8.4 | -- | -- | -- | -- |
| 47.69 | 0.323 | 3.06 | -0.0607 | 0.0657 | -- | -- | -- | -0.0752 | 9.6 | -- | -- | -- | -- |
| 45.08 | 0.313 | 3.05 | -0.0615 | -- | -0.468 | -- | -- | -0.0554 | -- | 51.93 | 6 | -- | -- |
| 44.95 | 0.312 | 3.05 | -- | 0.0661 | -0.477 | -- | -- | -0.0493 | 6.78 | 51.98 | 6 | -- | -- |
| 47.94 | 0.324 | 3.06 | -0.0612 | -- | -- | -- | -- | -0.0751 | -- | -- | -- | -- | -- |
| 47.78 | 0.323 | 3.05 | -- | 0.0659 | -- | -- | -- | -0.0685 | 9.67 | -- | -- | -- | -- |
| 45.17 | 0.313 | 3.05 | -- | -- | -0.468 | -- | -- | -0.0486 | -- | 51.81 | 6 | -- | -- |
| 48.04 | 0.324 | 3.06 | -- | -- | -- | -- | -- | -0.0683 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.54 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 2 | 35.70 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 3 | 35.86 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 4 | 36.54 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 8 | 36.58 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 10 | 36.91 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 11 | 36.91 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 25 | 37.01 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 36 | 37.01 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 49 | 38.12 | humidity | 50 | 10 | > th | dose independent | sin | 7 | NA |
| 59 | 38.52 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 123 | 38.76 | radiation | 10 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 138 | 38.80 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 200 | 39.27 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 0 | NA |
| 428 | 39.50 | humidity | 60 | 270 | < th | dose independent | rect. | 10 | 1 |
| 440 | 39.53 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 459 | 39.55 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 461 | 39.55 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 462 | 39.56 | humidity | 70 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 465 | 39.59 | humidity | 70 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 466 | 39.59 | humidity | 70 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 486 | 39.63 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 660 | 40.41 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 693 | 40.80 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 700 | 40.91 | humidity | 60 | 270 | < th | dose dependent | rect. | 10 | 2 |
| 705 | 40.95 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 712 | 40.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 11 |
| 714 | 41.00 | wind | 9 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 717 | 41.00 | wind | 9 | 43200 | > th | dose dependent | rect. | 1 | 8 |
| 737 | 41.02 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 743 | 41.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 752 | 41.06 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 754 | 41.06 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 756 | 41.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 761 | 41.09 | humidity | 60 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 769 | 41.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 771 | 41.12 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 779 | 41.14 | humidity | 60 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 849 | 41.17 | wind | 9 | 43200 | > th | dose dependent | sin | 6 | NA |
| 871 | 41.18 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 883 | 41.18 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 899 | 41.20 | humidity | 60 | 270 | < th | dose independent | rect. | 19 | 16 |
| 968 | 41.27 | wind | 9 | 43200 | > th | dose independent | rect. | 23 | 11 |