Os06g0554700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin heavy chain (Fragment).
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Os06g0554700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin heavy chain (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.25 | 0.309 | 9.88 | 0.0629 | 0.368 | -0.761 | -0.0757 | -1.43 | 0.764 | 4.77 | 0.83 | 4233 | -- | -- |
| 44.09 | 0.309 | 9.85 | 0.32 | 0.338 | -0.652 | -0.139 | -- | 0.839 | 4.87 | 1.5 | 5619 | -- | -- |
| 43.2 | 0.306 | 9.88 | 0.0743 | 0.37 | -0.764 | -- | -1.4 | 0.763 | 4.71 | 0.8213 | 4214 | -- | -- |
| 43.74 | 0.308 | 9.84 | 0.31 | 0.36 | -0.653 | -- | -- | 0.844 | 4.88 | 1.52 | 9927 | -- | -- |
| 45.46 | 0.314 | 9.86 | -0.0204 | -- | -0.679 | -- | -1.24 | 0.797 | -- | 1.609 | 5165 | -- | -- |
| 51.89 | 0.338 | 9.87 | 0.186 | 0.367 | -- | 0.0197 | -- | 0.7 | 6.03 | -- | -- | -- | -- |
| 51.89 | 0.337 | 9.87 | 0.186 | 0.368 | -- | -- | -- | 0.7 | 6.01 | -- | -- | -- | -- |
| 44.77 | 0.312 | 9.87 | 0.278 | -- | -0.808 | -- | -- | 0.786 | -- | 1.65 | 5083 | -- | -- |
| 45.87 | 0.315 | 9.85 | -- | 0.357 | -0.624 | -- | -- | 0.84 | 4.85 | 2.141 | 9905 | -- | -- |
| 58.89 | 0.359 | 9.88 | 0.197 | -- | -- | -- | -- | 0.708 | -- | -- | -- | -- | -- |
| 52.8 | 0.34 | 9.88 | -- | 0.37 | -- | -- | -- | 0.679 | 5.99 | -- | -- | -- | -- |
| 46.84 | 0.319 | 9.86 | -- | -- | -0.829 | -- | -- | 0.784 | -- | 1.642 | 5073 | -- | -- |
| 59.91 | 0.361 | 9.88 | -- | -- | -- | -- | -- | 0.686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 2 | 40.12 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 3 | 40.25 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 5 | 40.30 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 8 | 40.31 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 12 | 40.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 13 | 40.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 14 | 40.34 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 17 | 40.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 18 | 40.37 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 21 | 40.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 22 | 40.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 37 | 40.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 41 | 40.43 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 9 |
| 45 | 40.46 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 59 | 40.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 95 | 40.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 116 | 40.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 131 | 40.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 132 | 40.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 18 |
| 140 | 40.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 141 | 40.58 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 160 | 40.61 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 161 | 40.61 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 214 | 40.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 229 | 40.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 230 | 40.66 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 251 | 40.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 253 | 40.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 257 | 40.68 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 258 | 40.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 346 | 40.74 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 432 | 40.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 480 | 40.80 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 481 | 40.80 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 506 | 40.81 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 507 | 40.81 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 508 | 40.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 509 | 40.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 535 | 40.82 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 571 | 40.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 576 | 40.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 609 | 40.84 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 627 | 40.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 638 | 40.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 640 | 40.85 | temperature | 10.0 | 14400 | > th | dose dependent | no | NA | NA |
| 645 | 40.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 676 | 40.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 677 | 40.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 686 | 40.86 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 710 | 40.86 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 874 | 40.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 917 | 40.92 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 919 | 40.92 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 958 | 40.93 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 959 | 40.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 968 | 40.93 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |