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Os01g0744000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin heavy chain (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.63 (0.0395) R2 : 0.629
β1 : -2.98 (0.143) R2dD : 0.368 R2D : 0.281
β2 : 1.75 (0.106) R2dC : 0.268 R2C : 0.134
β3 : 1.77 (0.155) R2dE : 0.136 R2E : -0.0287
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.537 (0.0875) R2dN8 : 0.0434 R2N8 : 0.0347
σ : 0.731
deviance : 246.59
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C
peak time of C : 15.1
E
wheather : humidity
threshold : 78.32
memory length : 701
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.9
open length of G : 14.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
238.2 0.725 7.62 -2.87 1.75 1.68 0.541 3.28 -0.573 15.2 77.59 688 18.1 13.9
246.75 0.732 7.63 -2.95 1.74 1.75 -0.135 -- -0.55 15.1 78.32 701 18 14.2
239 0.72 7.62 -2.87 1.75 1.66 -- 2.95 -0.574 15.2 77.66 691 18.1 13.9
246.59 0.731 7.63 -2.98 1.75 1.77 -- -- -0.537 15.1 78.32 701 17.9 14.2
308.45 0.818 7.68 -2.95 -- 2.03 -- -0.575 -0.701 -- 91.23 539 20.2 18.2
316.94 0.835 7.7 -2.9 1.29 -- -0.277 -- -0.827 15.3 -- -- -- --
317.18 0.834 7.7 -2.9 1.29 -- -- -- -0.829 15.3 -- -- -- --
297.36 0.803 7.71 -3.05 -- 2.63 -- -- -0.954 -- 114.9 571 20 20.1
361.84 0.886 7.6 -- 1.28 2.17 -- -- -0.742 15.2 75.97 31260 17 14.2
410.7 0.947 7.7 -2.96 -- -- -- -- -0.863 -- -- -- -- --
539.22 1.09 7.63 -- 1.34 -- -- -- -0.506 15.3 -- -- -- --
423.54 0.959 7.69 -- -- 3.2 -- -- -0.851 -- 84.52 30367 16.5 15.1
641.36 1.18 7.63 -- -- -- -- -- -0.535 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 242.77 humidity 80 720 < th dose dependent rect. 18 14
2 244.62 humidity 80 720 < th dose dependent rect. 18 7
19 248.52 humidity 70 720 > th dose independent rect. 18 9
26 249.88 temperature 30 720 > th dose dependent rect. 18 1
56 251.65 radiation 40 1440 > th dose dependent rect. 14 19
57 251.93 temperature 25 14400 > th dose dependent rect. 23 1
63 252.58 radiation 40 14400 > th dose dependent rect. 14 2
85 253.16 radiation 40 1440 > th dose dependent rect. 14 1
126 253.92 humidity 70 720 < th dose independent rect. 18 13
127 253.95 humidity 70 720 < th dose independent rect. 18 2
143 254.35 humidity 50 720 > th dose dependent rect. 17 8
157 255.16 humidity 70 720 > th dose independent rect. 18 2
172 255.73 humidity 90 720 < th dose dependent sin 12 NA
184 256.04 temperature 30 43200 > th dose independent rect. 18 1
201 256.09 humidity 70 14400 > th dose independent rect. 19 1
231 256.43 temperature 30 43200 < th dose independent rect. 18 6
234 256.46 humidity 70 720 > th dose independent rect. 17 14
239 256.53 radiation 10 1440 < th dose dependent sin 14 NA
244 256.62 temperature 30 43200 < th dose independent rect. 18 10
245 256.62 temperature 30 43200 < th dose independent rect. 18 14
250 256.64 wind 3 43200 < th dose dependent rect. 2 2
256 256.73 temperature 30 43200 > th dose dependent rect. 17 2
270 256.74 temperature 30 43200 < th dose independent rect. 18 1
271 256.74 wind 5 43200 < th dose independent rect. 10 2
284 257.06 radiation 10 1440 < th dose dependent rect. 13 18
290 257.15 wind 5 43200 > th dose independent rect. 10 2
291 257.16 temperature 25 14400 > th dose independent rect. 23 4
297 257.25 temperature 25 14400 > th dose independent rect. 24 2
304 257.43 radiation 20 14400 < th dose independent rect. 10 2
306 257.43 temperature 25 14400 < th dose independent rect. 24 3
337 257.71 radiation 10 1440 > th dose independent sin 14 NA
361 257.77 radiation 10 1440 < th dose dependent rect. 9 22
364 257.80 humidity 70 14400 > th dose independent rect. 19 12
373 257.94 temperature 30 720 > th dose independent rect. 18 1
404 258.16 radiation 10 1440 > th dose independent rect. 11 22
430 258.30 radiation 40 1440 > th dose independent rect. 14 19
431 258.30 radiation 10 1440 > th dose independent rect. 8 23
444 258.40 humidity 70 720 > th dose independent sin 12 NA
445 258.41 radiation 10 14400 < th dose dependent rect. 14 1
464 258.57 radiation 40 1440 > th dose independent rect. 14 2
481 258.58 humidity 70 14400 > th dose independent rect. 19 5
482 258.59 humidity 70 14400 > th dose independent rect. 19 8
483 258.59 radiation 10 1440 > th dose independent rect. 15 23
498 258.75 radiation 20 14400 < th dose dependent rect. 10 7
505 258.83 radiation 10 14400 > th dose independent rect. 11 6
508 258.86 radiation 20 14400 < th dose dependent rect. 10 19
509 258.87 radiation 20 14400 < th dose dependent rect. 10 15
513 258.88 radiation 10 14400 > th dose independent rect. 8 9
517 258.88 radiation 20 14400 < th dose dependent rect. 10 9
544 258.93 wind 5 43200 < th dose independent rect. 8 5
553 258.97 wind 5 43200 > th dose independent rect. 8 5
554 258.97 radiation 10 1440 < th dose dependent sin 21 NA
568 259.00 radiation 10 1440 < th dose dependent rect. 5 20
569 259.01 radiation 10 14400 > th dose independent rect. 8 22
570 259.01 radiation 10 1440 < th dose dependent rect. 5 22
572 259.02 radiation 10 14400 > th dose independent rect. 10 20
574 259.02 radiation 10 1440 < th dose dependent rect. 5 18
586 259.07 radiation 10 1440 < th dose dependent rect. 5 14
602 259.09 radiation 10 1440 > th dose independent no NA NA
607 259.09 radiation 10 1440 > th dose independent rect. 5 13
682 259.09 wind 1 43200 > th dose dependent rect. 3 1
733 259.21 radiation 10 1440 < th dose dependent rect. 7 18
734 259.21 radiation 10 1440 < th dose dependent rect. 2 23
736 259.22 radiation 10 1440 < th dose dependent rect. 7 20
739 259.22 radiation 10 1440 < th dose dependent rect. 20 23
741 259.23 radiation 10 1440 < th dose dependent no NA NA
748 259.23 radiation 10 1440 < th dose dependent rect. 24 23
757 259.25 radiation 10 1440 < th dose dependent rect. 7 16
775 259.28 radiation 10 1440 > th dose independent rect. 13 18
777 259.28 radiation 10 1440 < th dose dependent rect. 2 17
779 259.28 radiation 10 1440 < th dose dependent rect. 24 19
810 259.31 radiation 10 1440 < th dose dependent rect. 7 12
819 259.36 radiation 40 1440 < th dose independent rect. 14 19
826 259.44 radiation 10 14400 > th dose independent sin 19 NA
833 259.47 temperature 30 43200 > th dose dependent sin 12 NA
868 259.53 radiation 20 14400 < th dose dependent sin 20 NA
886 259.55 radiation 40 1440 < th dose independent rect. 14 1
900 259.57 radiation 20 14400 > th dose dependent rect. 16 2
921 259.59 radiation 40 1440 < th dose independent rect. 14 10
934 259.64 radiation 10 14400 > th dose independent rect. 14 2
965 259.75 radiation 40 1440 < th dose independent rect. 14 13
966 259.75 radiation 10 1440 < th dose dependent rect. 15 23
969 259.77 humidity 70 1440 < th dose independent sin 15 NA
970 259.77 radiation 20 14400 > th dose independent rect. 10 2
989 259.86 humidity 90 43200 > th dose dependent rect. 9 2
991 259.87 humidity 70 720 < th dose independent sin 12 NA