Os03g0773600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os03g0773600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.01 | 0.72 | 6.79 | -1.72 | 2.82 | -1.35 | 1 | -1.39 | -0.703 | 6.9 | 20.61 | 328 | 21.3 | 16 |
| 240.48 | 0.722 | 6.77 | -1.46 | 2.83 | -1.32 | 0.747 | -- | -0.646 | 6.84 | 20.79 | 355 | 21.1 | 15.9 |
| 236.76 | 0.717 | 6.79 | -1.63 | 2.77 | -1.33 | -- | -1.05 | -0.688 | 6.9 | 20.67 | 338 | 21.1 | 16.3 |
| 240.06 | 0.722 | 6.78 | -1.48 | 2.67 | -1.29 | -- | -- | -0.679 | 6.84 | 20.71 | 366 | 20.8 | 16.2 |
| 329.94 | 0.846 | 6.89 | -1.71 | -- | -1.72 | -- | -1.88 | -0.848 | -- | -9.867 | 1002 | 23.3 | 17.3 |
| 295.17 | 0.805 | 6.85 | -1.76 | 1.81 | -- | 0.79 | -- | -0.848 | 5.92 | -- | -- | -- | -- |
| 296.6 | 0.806 | 6.85 | -1.75 | 1.81 | -- | -- | -- | -0.85 | 6.01 | -- | -- | -- | -- |
| 286.1 | 0.788 | 6.89 | -1.78 | -- | -1.85 | -- | -- | -0.885 | -- | -7.184 | 482 | 6.98 | 14.8 |
| 289.73 | 0.793 | 6.7 | -- | 2.83 | -1.62 | -- | -- | -0.367 | 7.04 | 20.7 | 433 | 20.3 | 16.6 |
| 466.48 | 1.01 | 6.88 | -1.7 | -- | -- | -- | -- | -0.809 | -- | -- | -- | -- | -- |
| 377.44 | 0.909 | 6.8 | -- | 1.78 | -- | -- | -- | -0.655 | 6.05 | -- | -- | -- | -- |
| 368.46 | 0.894 | 6.86 | -- | -- | -1.86 | -- | -- | -0.687 | -- | -6.996 | 526 | 6.56 | 15 |
| 542.57 | 1.09 | 6.84 | -- | -- | -- | -- | -- | -0.621 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 16 |
| 2 | 242.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 5 | 243.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 7 | 244.40 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 12 | 245.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 22 | 246.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 25 | 246.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 26 | 246.95 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 16 |
| 34 | 247.54 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 35 | 247.65 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 47 | 248.61 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 56 | 249.13 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 75 | 250.02 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 77 | 250.09 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 16 |
| 83 | 250.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 84 | 250.46 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 105 | 251.35 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 16 |
| 115 | 251.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 119 | 251.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 123 | 252.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 16 |
| 138 | 252.24 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 142 | 252.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 143 | 252.29 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 3 |
| 152 | 252.68 | radiation | 10.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 158 | 252.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 169 | 253.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 180 | 253.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 183 | 253.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 184 | 253.22 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 17 |
| 187 | 253.30 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 190 | 253.34 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 200 | 253.48 | radiation | 1.0 | 30 | > th | dose independent | sin | 7 | NA |
| 210 | 253.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 213 | 253.69 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 216 | 253.71 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 218 | 253.72 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 220 | 253.74 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 12 | 16 |
| 235 | 253.93 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 236 | 253.97 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 242 | 254.05 | radiation | 1.0 | 30 | < th | dose independent | sin | 7 | NA |
| 245 | 254.07 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 253 | 254.15 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 8 |
| 262 | 254.31 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 20 |
| 270 | 254.37 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 292 | 254.63 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 302 | 254.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 338 | 255.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 348 | 255.15 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 8 |
| 363 | 255.29 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 376 | 255.36 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 387 | 255.43 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 392 | 255.46 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 396 | 255.49 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 17 |
| 401 | 255.52 | temperature | 15.0 | 90 | > th | dose independent | rect. | 4 | 8 |
| 407 | 255.53 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 421 | 255.68 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 6 |
| 450 | 255.86 | temperature | 10.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 451 | 255.87 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 471 | 255.95 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 486 | 256.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 491 | 256.14 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 516 | 256.32 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 518 | 256.34 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 4 |
| 539 | 256.45 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 564 | 256.61 | wind | 9.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 593 | 256.81 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 7 |
| 594 | 256.81 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 598 | 256.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 8 |
| 599 | 256.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 8 |
| 631 | 257.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 639 | 257.10 | temperature | 20.0 | 720 | < th | dose independent | sin | 10 | NA |
| 645 | 257.13 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 647 | 257.13 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 648 | 257.13 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 668 | 257.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 694 | 257.39 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 713 | 257.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 723 | 257.57 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 739 | 257.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 8 |
| 743 | 257.64 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 744 | 257.65 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 747 | 257.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 6 |
| 749 | 257.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 775 | 257.78 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 16 |
| 782 | 257.82 | wind | 3.0 | 270 | < th | dose dependent | rect. | 22 | 4 |
| 825 | 258.04 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 8 |
| 826 | 258.04 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 842 | 258.07 | temperature | 20.0 | 720 | > th | dose independent | sin | 12 | NA |
| 858 | 258.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 21 |
| 860 | 258.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 861 | 258.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 882 | 258.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 893 | 258.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 18 |
| 899 | 258.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 924 | 258.45 | humidity | 50.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 941 | 258.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 18 |
| 942 | 258.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 962 | 258.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 18 |
| 974 | 258.69 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 12 | 16 |
| 975 | 258.69 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 12 | 16 |
| 1000 | 258.83 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 17 |