Os02g0775400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin heavy chain-like protein (Fragment).
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Os02g0775400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin heavy chain-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.21 | 0.509 | 8.47 | -3.36 | 0.586 | 0.918 | 0.962 | -0.271 | -0.708 | 1.11 | 73.8 | 1148 | -- | -- |
| 117.29 | 0.504 | 8.47 | -3.35 | 0.588 | 0.891 | 0.936 | -- | -0.712 | 1.08 | 74 | 1145 | -- | -- |
| 120.74 | 0.512 | 8.47 | -3.36 | 0.586 | 0.897 | -- | 0.258 | -0.706 | 1.11 | 73.63 | 1145 | -- | -- |
| 120.8 | 0.512 | 8.47 | -3.38 | 0.586 | 0.921 | -- | -- | -0.703 | 1.09 | 73.12 | 1152 | -- | -- |
| 138.4 | 0.548 | 8.47 | -3.4 | -- | 1.24 | -- | 0.133 | -0.715 | -- | 78 | 1093 | -- | -- |
| 134.35 | 0.543 | 8.49 | -3.18 | 0.76 | -- | 1.06 | -- | -0.775 | 0.924 | -- | -- | -- | -- |
| 139.12 | 0.552 | 8.49 | -3.22 | 0.758 | -- | -- | -- | -0.781 | 0.923 | -- | -- | -- | -- |
| 138.42 | 0.548 | 8.47 | -3.4 | -- | 1.25 | -- | -- | -0.712 | -- | 77.94 | 1093 | -- | -- |
| 290.85 | 0.794 | 8.49 | -- | 0.106 | 1.88 | -- | -- | -0.854 | 1.77 | 69 | 31306 | -- | -- |
| 174.94 | 0.618 | 8.48 | -3.19 | -- | -- | -- | -- | -0.766 | -- | -- | -- | -- | -- |
| 411.69 | 0.949 | 8.41 | -- | 0.707 | -- | -- | -- | -0.423 | 0.726 | -- | -- | -- | -- |
| 258.77 | 0.749 | 8.4 | -- | -- | 2.96 | -- | -- | -0.418 | -- | 68 | 31147 | -- | -- |
| 442.99 | 0.982 | 8.4 | -- | -- | -- | -- | -- | -0.413 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.69 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 7 | 107.70 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 11 | 108.63 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 12 | 108.65 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 13 | 108.72 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 16 | 108.89 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 43 | 110.03 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 48 | 110.21 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 56 | 110.63 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 58 | 110.70 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 71 | 111.03 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 82 | 111.47 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 96 | 111.52 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 112 | 111.68 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 9 |
| 128 | 111.78 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 136 | 112.15 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 152 | 112.34 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 156 | 112.37 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 9 |
| 175 | 112.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 204 | 113.02 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 212 | 113.11 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 215 | 113.15 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 240 | 113.36 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 256 | 113.49 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 268 | 113.61 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 289 | 113.82 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 292 | 113.85 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 300 | 113.93 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 317 | 114.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 321 | 114.03 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 353 | 114.10 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 365 | 114.21 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 368 | 114.22 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 382 | 114.46 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 387 | 114.49 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 420 | 114.74 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 425 | 114.76 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 426 | 114.80 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 469 | 114.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 501 | 115.15 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 559 | 115.42 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 606 | 115.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 611 | 115.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 628 | 115.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 636 | 115.72 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 652 | 115.80 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 655 | 115.80 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 9 |
| 701 | 115.87 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 702 | 115.88 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 713 | 115.88 | humidity | 60.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 756 | 115.98 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 812 | 116.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 869 | 116.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 15 |
| 894 | 116.31 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 981 | 116.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 987 | 116.42 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 9 |