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Os12g0616000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin-like protein KIFC3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.99 (0.0299) R2 : 0.524
β1 : 1.6 (0.109) R2dD : 0.231 R2D : 0.182
β2 : 1.34 (0.078) R2dC : 0.308 R2C : 0.281
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.371 (0.0638) R2dN8 : 0.0473 R2N8 : -0.00484
σ : 0.562
deviance : 144.05
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_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
125.62 0.527 6.02 1.33 1.05 1.13 0.432 -0.892 0.231 18.7 24.6 12 -- --
126 0.523 6.01 1.43 1.05 1.06 0.384 -- 0.258 18.7 24.5 12 -- --
126.09 0.523 6.02 1.33 1.05 1.14 -- -0.776 0.234 18.7 24.6 12 -- --
126.37 0.524 6.01 1.43 1.05 1.07 -- -- 0.258 18.7 24.5 12 -- --
163.24 0.595 6.02 1.14 -- 1.7 -- -1.13 0.161 -- 24.6 275 -- --
142.83 0.56 5.99 1.6 1.33 -- 0.706 -- 0.368 17.7 -- -- -- --
144.05 0.562 5.99 1.6 1.34 -- -- -- 0.371 17.7 -- -- -- --
163.51 0.596 6 1.3 -- 1.61 -- -- 0.195 -- 24.5 271 -- --
177.17 0.62 6.06 -- 0.966 1.44 -- -- 0.0225 19.3 23.55 18 -- --
236.84 0.719 5.97 1.56 -- -- -- -- 0.339 -- -- -- -- --
211.34 0.68 6.03 -- 1.31 -- -- -- 0.193 17.7 -- -- -- --
206.91 0.67 6.04 -- -- 1.79 -- -- 0.0253 -- 24.25 273 -- --
300.64 0.809 6.01 -- -- -- -- -- 0.167 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.19 temperature 10 720 > th dose dependent rect. 3 6
2 116.37 temperature 20 720 > th dose dependent rect. 4 4
5 116.83 temperature 20 720 > th dose dependent rect. 5 2
18 118.87 temperature 15 10 > th dose dependent rect. 6 14
27 119.88 temperature 10 270 > th dose dependent rect. 3 21
36 121.13 temperature 10 270 > th dose dependent rect. 4 12
47 121.57 temperature 25 10 > th dose independent rect. 6 14
53 121.76 temperature 25 720 > th dose independent rect. 6 2
55 121.87 temperature 10 720 > th dose dependent rect. 21 12
63 121.95 temperature 15 10 > th dose dependent rect. 6 20
74 122.19 temperature 10 30 > th dose dependent rect. 3 23
94 122.73 temperature 15 30 > th dose dependent rect. 6 18
108 123.06 temperature 25 10 > th dose independent rect. 6 5
118 123.20 temperature 10 720 > th dose dependent rect. 21 18
124 123.29 temperature 30 720 < th dose dependent rect. 24 12
143 123.55 temperature 30 10 < th dose dependent rect. 2 14
151 123.60 temperature 30 10 < th dose dependent rect. 2 21
170 123.88 humidity 60 720 > th dose dependent rect. 21 3
188 124.09 temperature 30 270 < th dose dependent rect. 24 16
189 124.12 temperature 30 720 < th dose dependent rect. 1 4
203 124.18 atmosphere 1005 10 > th dose dependent rect. 2 4
214 124.26 temperature 30 270 < th dose dependent rect. 24 19
254 124.60 humidity 90 270 < th dose independent rect. 24 6
256 124.62 temperature 25 10 > th dose dependent rect. 23 21
267 124.70 temperature 25 10 > th dose dependent rect. 1 19
268 124.71 temperature 30 10 < th dose dependent rect. 24 23
293 124.91 temperature 30 10 < th dose dependent rect. 2 12
340 125.20 temperature 30 720 < th dose independent rect. 9 3
349 125.25 temperature 30 720 < th dose dependent rect. 2 1
372 125.34 temperature 20 720 > th dose dependent sin 6 NA
386 125.40 humidity 80 720 > th dose independent rect. 21 3
389 125.42 temperature 25 30 < th dose independent rect. 2 14
402 125.48 temperature 25 30 < th dose independent rect. 2 20
404 125.48 humidity 50 720 > th dose dependent rect. 21 10
441 125.67 temperature 10 720 > th dose dependent sin 6 NA
551 126.07 temperature 25 10 > th dose dependent rect. 1 23
553 126.08 temperature 10 270 > th dose dependent sin 3 NA
568 126.13 temperature 25 30 > th dose independent rect. 1 10
569 126.13 temperature 25 10 > th dose dependent no NA NA
574 126.14 temperature 25 30 < th dose independent rect. 2 18
577 126.15 humidity 70 720 > th dose dependent rect. 23 1
599 126.20 temperature 30 720 < th dose dependent sin 5 NA
655 126.35 temperature 30 720 < th dose independent rect. 24 12
670 126.40 humidity 90 720 < th dose independent rect. 24 3
698 126.49 temperature 10 10 > th dose dependent sin 1 NA
703 126.50 temperature 20 720 < th dose independent rect. 4 1
721 126.53 temperature 25 30 < th dose independent rect. 2 12
786 126.64 temperature 25 10 > th dose dependent rect. 12 23
803 126.68 temperature 30 90 < th dose independent rect. 9 20
880 126.87 atmosphere 1005 90 > th dose dependent rect. 2 2
900 126.91 temperature 10 10 > th dose dependent rect. 21 23
910 126.95 temperature 25 10 > th dose dependent rect. 17 23
912 126.96 temperature 30 10 < th dose dependent sin 1 NA
934 127.04 temperature 30 90 < th dose independent rect. 9 12
948 127.06 temperature 25 10 > th dose dependent rect. 15 23
949 127.07 temperature 20 720 > th dose independent rect. 21 12
963 127.09 humidity 90 720 < th dose dependent rect. 24 1
969 127.10 temperature 25 30 > th dose independent rect. 23 21
1000 127.19 radiation 20 10 < th dose independent rect. 6 3