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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0629700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin-1 (Kinesin-like protein A).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.88 (0.122) R2 : 0.558
β1 : -7.48 (0.851) R2dD : 0.785 R2D : 0.12
β2 : 0.343 (0.191) R2dC : 0.00317 R2C : -0.0377
β3 : 3.71 (0.432) R2dE : 0.348 R2E : -0.00841
β4 : 3.35 (0.863) R2dD*C : 0.0147 R2D*C : -0.0291
β5 : -7.21 (3.5) R2dD*E : 0.0511 R2D*E : -0.358
γ1 : -1.25 (0.207) R2dN8 : 0.0836 R2N8 : -0.0159
σ : 1.38
deviance : 863.41
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_____
C
peak time of C : 6.73
E
wheather : temperature
threshold : 27.46
memory length : 1304
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
863.41 1.38 6.88 -7.48 0.343 3.71 3.35 -7.21 -1.25 6.73 27.46 1304 -- --
880.18 1.38 6.82 -6.05 0.33 3.16 3.6 -- -1.35 6.76 26 1337 -- --
883.46 1.38 6.88 -7.33 0.522 3.78 -- -6.74 -1.31 9.71 27.17 1282 -- --
891.63 1.39 6.69 -5.82 0.516 3.08 -- -- -1.02 9.88 27.16 1289 -- --
897.99 1.4 6.9 -7.32 -- 3.68 -- -6.4 -1.33 -- 27.1 1309 -- --
1263.44 1.67 6.7 -4.88 0.413 -- 3.96 -- -1.04 5.74 -- -- -- --
1301.92 1.69 6.7 -4.86 0.437 -- -- -- -1.06 5.99 -- -- -- --
905.03 1.4 6.71 -5.79 -- 2.98 -- -- -1.05 -- 27.1 1308 -- --
1700.26 1.92 6.48 -- 0.461 2.14 -- -- -0.0609 9.83 31.2 1165 -- --
1311.82 1.69 6.71 -4.84 -- -- -- -- -1.05 -- -- -- -- --
1923.29 2.05 6.58 -- 0.37 -- -- -- -0.515 6.64 -- -- -- --
1712.5 1.93 6.49 -- -- 2.07 -- -- -0.0751 -- 31.21 1183 -- --
1930.43 2.05 6.59 -- -- -- -- -- -0.509 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 870.01 humidity 80 1440 < th dose dependent rect. 16 5
7 880.19 temperature 25 1440 > th dose dependent rect. 13 10
11 881.06 temperature 25 1440 > th dose dependent rect. 15 2
12 881.13 temperature 25 1440 > th dose dependent rect. 13 20
17 882.30 temperature 25 1440 > th dose dependent rect. 15 4
27 882.94 temperature 30 1440 > th dose dependent sin 14 NA
32 883.34 temperature 25 1440 > th dose dependent rect. 13 6
87 884.73 temperature 30 1440 < th dose independent sin 12 NA
108 885.78 humidity 70 1440 < th dose independent rect. 18 13
117 886.14 humidity 70 1440 < th dose independent rect. 18 2
157 886.82 temperature 30 1440 > th dose independent sin 12 NA
196 887.34 temperature 30 1440 > th dose independent rect. 15 4
210 887.35 temperature 25 1440 > th dose dependent rect. 6 17
217 887.52 temperature 30 1440 < th dose independent rect. 15 13
227 887.65 temperature 30 1440 < th dose independent rect. 15 16
241 887.87 temperature 30 1440 < th dose independent rect. 15 10
354 889.32 humidity 80 1440 < th dose dependent rect. 16 16
370 889.61 humidity 70 1440 > th dose independent rect. 18 13
374 889.66 humidity 70 1440 > th dose independent rect. 18 11
378 889.75 temperature 30 1440 > th dose dependent no NA NA
488 890.08 humidity 70 1440 > th dose independent rect. 18 7
503 890.36 temperature 30 1440 < th dose independent rect. 15 21
518 890.66 humidity 70 1440 > th dose independent rect. 18 2
579 891.71 temperature 30 1440 > th dose dependent rect. 17 23
585 891.91 humidity 70 1440 < th dose independent sin 13 NA
586 891.92 temperature 30 1440 < th dose independent rect. 15 19
617 892.76 radiation 30 1440 < th dose dependent rect. 16 14
645 893.55 temperature 30 1440 > th dose independent rect. 15 21
647 893.67 radiation 40 1440 < th dose dependent rect. 16 12
658 894.02 temperature 30 1440 < th dose independent rect. 9 19
671 894.07 temperature 30 1440 < th dose independent rect. 9 22
679 894.19 temperature 30 1440 < th dose independent rect. 9 16
690 894.41 temperature 30 1440 < th dose independent rect. 9 10
696 894.58 temperature 30 1440 > th dose independent rect. 15 19
721 894.89 radiation 40 1440 < th dose dependent rect. 16 9
741 895.59 temperature 25 720 > th dose dependent rect. 18 15
767 896.03 radiation 40 1440 < th dose dependent rect. 16 4
789 896.49 radiation 30 1440 < th dose dependent rect. 16 6
812 896.82 temperature 30 1440 < th dose independent rect. 17 23
817 897.06 temperature 30 1440 < th dose independent rect. 6 22
826 897.21 temperature 30 1440 < th dose independent rect. 6 19
827 897.21 temperature 30 1440 < th dose independent rect. 2 23
831 897.23 temperature 30 1440 < th dose independent rect. 20 23
832 897.24 temperature 30 1440 < th dose independent no NA NA
839 897.26 temperature 30 1440 < th dose independent rect. 24 23
870 897.36 radiation 1 1440 > th dose dependent rect. 16 14
881 897.42 temperature 30 1440 < th dose independent rect. 2 17
882 897.43 temperature 30 1440 < th dose independent rect. 6 13
948 897.89 temperature 30 1440 > th dose independent rect. 9 10
989 898.45 radiation 1 1440 > th dose dependent rect. 16 2