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Os01g0243100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinesin.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.23 (0.0314) R2 : 0.589
β1 : -1.05 (0.134) R2dD : 0.0874 R2D : 0.0908
β2 : 0.773 (0.0749) R2dC : 0.101 R2C : 0.0633
β3 : -1.54 (0.16) R2dE : 0.13 R2E : 0.25
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.821 (0.0715) R2dN8 : 0.183 R2N8 : 0.173
σ : 0.573
deviance : 151.46
__
_____
C
peak time of C : 21.6
E
wheather : temperature
threshold : 18.42
memory length : 2918
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
142.48 0.561 8.2 -1.11 0.797 -0.772 -1.49 2.27 -0.825 21.6 19.5 1459 -- --
144.97 0.561 8.24 -1.22 0.755 -1.2 -1.91 -- -0.838 21.5 18.7 2827 -- --
149.84 0.57 8.19 -1.03 0.795 -0.825 -- 2.3 -0.807 21.4 19.5 1629 -- --
151.46 0.573 8.23 -1.05 0.773 -1.54 -- -- -0.821 21.6 18.42 2918 -- --
186.95 0.637 8.17 -1.01 -- -0.817 -- 2.49 -0.815 -- 19.4 1615 -- --
172.64 0.616 8.3 -1.85 0.804 -- -1.58 -- -1.09 21.5 -- -- -- --
181.77 0.631 8.3 -1.79 0.813 -- -- -- -1.09 21.4 -- -- -- --
188.24 0.639 8.21 -1.05 -- -1.59 -- -- -0.805 -- 18.46 2986 -- --
167.06 0.602 8.2 -- 0.857 -1.75 -- -- -0.583 21.5 18.4 10099 -- --
220.44 0.694 8.28 -1.79 -- -- -- -- -1.09 -- -- -- -- --
266.2 0.763 8.26 -- 0.813 -- -- -- -0.889 21.2 -- -- -- --
195.96 0.652 8.15 -- -- -1.82 -- -- -0.58 -- 15.98 41739 -- --
304.52 0.815 8.23 -- -- -- -- -- -0.893 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 135.87 wind 1 43200 > th dose independent rect. 9 2
2 136.70 wind 1 43200 < th dose independent rect. 9 2
3 138.26 wind 3 43200 < th dose dependent rect. 10 1
5 139.77 wind 3 43200 < th dose independent rect. 13 1
6 140.23 wind 3 43200 > th dose independent rect. 13 1
7 140.23 radiation 20 14400 > th dose dependent rect. 6 1
22 140.72 humidity 80 43200 < th dose dependent rect. 7 1
23 140.73 wind 5 43200 < th dose dependent rect. 13 1
25 140.80 humidity 90 14400 > th dose dependent rect. 24 15
30 141.05 humidity 80 43200 > th dose independent rect. 6 1
37 141.19 radiation 1 14400 < th dose independent rect. 18 11
38 141.21 wind 1 43200 > th dose independent rect. 2 1
41 141.26 temperature 15 270 > th dose dependent rect. 9 22
44 141.29 radiation 1 90 > th dose dependent sin 6 NA
45 141.30 temperature 10 43200 > th dose independent rect. 9 6
47 141.30 wind 1 43200 < th dose dependent rect. 9 17
48 141.34 wind 3 43200 < th dose dependent rect. 10 13
49 141.36 wind 3 43200 > th dose independent rect. 12 4
57 141.46 radiation 1 14400 > th dose independent rect. 7 1
58 141.46 radiation 1 14400 < th dose independent rect. 7 1
60 141.48 wind 1 43200 < th dose independent rect. 2 1
67 141.56 humidity 80 43200 < th dose independent rect. 6 1
71 141.58 wind 3 43200 < th dose dependent rect. 10 5
80 141.64 radiation 1 14400 < th dose independent rect. 10 2
81 141.64 radiation 1 14400 < th dose dependent rect. 10 2
82 141.64 radiation 20 90 < th dose dependent rect. 4 10
85 141.65 wind 3 43200 < th dose independent rect. 12 10
92 141.68 radiation 1 14400 < th dose dependent rect. 24 5
96 141.70 radiation 30 4320 < th dose independent rect. 16 16
97 141.70 humidity 90 14400 > th dose dependent sin 6 NA
100 141.72 wind 3 43200 > th dose independent rect. 12 10
116 141.81 temperature 10 43200 > th dose independent rect. 9 4
122 141.83 wind 1 43200 < th dose dependent rect. 2 1
127 141.85 radiation 1 14400 < th dose dependent rect. 3 2
131 141.88 radiation 20 14400 > th dose independent rect. 6 1
155 141.93 radiation 1 14400 < th dose dependent rect. 7 1
156 141.94 wind 3 43200 < th dose dependent rect. 17 5
162 141.99 radiation 1 14400 > th dose independent rect. 10 2
186 142.12 wind 3 43200 < th dose dependent rect. 17 7
189 142.13 temperature 20 1440 < th dose independent rect. 5 2
191 142.13 radiation 40 43200 < th dose dependent rect. 20 9
195 142.15 radiation 1 14400 < th dose independent rect. 18 8
196 142.15 wind 5 43200 < th dose dependent rect. 13 9
205 142.18 wind 5 43200 < th dose dependent rect. 13 11
209 142.19 wind 1 43200 > th dose independent rect. 8 18
210 142.20 wind 3 43200 < th dose dependent rect. 20 1
218 142.22 radiation 1 14400 < th dose independent rect. 18 3
219 142.22 temperature 20 1440 < th dose independent rect. 16 15
222 142.23 wind 1 43200 > th dose independent rect. 11 15
225 142.24 radiation 1 14400 < th dose independent rect. 18 1
237 142.27 temperature 20 1440 > th dose independent rect. 16 15
242 142.28 temperature 10 720 > th dose dependent rect. 3 18
267 142.38 radiation 1 14400 < th dose dependent rect. 20 9
283 142.42 wind 1 43200 > th dose independent rect. 11 1
289 142.43 radiation 1 14400 < th dose dependent rect. 18 21
299 142.47 humidity 90 14400 > th dose dependent rect. 12 18
301 142.49 radiation 30 4320 < th dose independent rect. 21 11
323 142.54 radiation 30 4320 < th dose independent rect. 24 8
342 142.57 temperature 20 1440 > th dose independent sin 13 NA
343 142.57 temperature 20 1440 < th dose independent sin 13 NA
344 142.57 radiation 30 4320 < th dose independent rect. 6 2
345 142.57 wind 1 43200 > th dose dependent rect. 15 1
363 142.61 temperature 20 1440 > th dose independent rect. 5 2
365 142.61 wind 9 43200 > th dose independent rect. 19 6
384 142.65 radiation 30 4320 < th dose independent rect. 2 6
387 142.65 radiation 40 43200 < th dose dependent rect. 22 7
410 142.69 temperature 20 4320 > th dose independent rect. 18 5
419 142.70 wind 1 43200 < th dose independent rect. 8 18
445 142.76 wind 9 43200 < th dose independent rect. 19 6
452 142.77 radiation 10 90 < th dose independent rect. 4 10
476 142.82 temperature 20 1440 > th dose independent rect. 17 10
488 142.84 wind 3 43200 > th dose independent sin 19 NA
491 142.85 wind 3 43200 < th dose independent sin 20 NA
496 142.85 wind 9 43200 > th dose dependent rect. 19 6
517 142.89 temperature 20 4320 < th dose independent rect. 18 5
519 142.89 temperature 20 4320 < th dose dependent rect. 23 1
520 142.89 radiation 1 14400 < th dose dependent rect. 18 15
531 142.91 radiation 40 43200 < th dose dependent rect. 24 5
550 142.94 temperature 20 1440 < th dose independent rect. 17 10
564 142.95 temperature 25 1440 < th dose dependent rect. 16 13
581 142.98 temperature 20 1440 < th dose independent rect. 18 8
633 143.03 radiation 1 14400 < th dose dependent rect. 7 22
635 143.04 humidity 90 14400 > th dose dependent rect. 5 1
676 143.08 radiation 1 14400 < th dose dependent rect. 24 15
687 143.09 radiation 1 14400 < th dose dependent rect. 4 11
715 143.11 wind 3 43200 < th dose dependent sin 19 NA
729 143.13 temperature 20 4320 > th dose independent rect. 18 1
741 143.14 temperature 25 1440 < th dose dependent sin 13 NA
746 143.14 radiation 1 14400 < th dose dependent rect. 10 23
748 143.15 humidity 50 43200 > th dose independent rect. 5 4
763 143.17 radiation 1 14400 < th dose dependent rect. 13 23
764 143.18 radiation 1 14400 > th dose independent rect. 7 7
765 143.18 temperature 20 10 > th dose independent rect. 12 19
782 143.19 radiation 1 14400 < th dose independent rect. 18 21
795 143.20 radiation 1 14400 < th dose dependent no NA NA
798 143.20 radiation 1 14400 < th dose dependent rect. 4 15
852 143.21 radiation 1 14400 < th dose independent rect. 7 7
864 143.22 radiation 1 14400 < th dose dependent sin 11 NA
869 143.23 humidity 50 43200 > th dose independent rect. 8 1
929 143.25 radiation 1 14400 < th dose dependent rect. 7 14
933 143.25 radiation 1 14400 < th dose dependent rect. 7 18
939 143.26 wind 9 43200 < th dose independent rect. 19 11
946 143.26 radiation 1 14400 < th dose dependent rect. 7 12
988 143.29 temperature 25 4320 < th dose dependent rect. 15 1
997 143.30 wind 9 43200 > th dose independent rect. 19 11