BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0418500 Os04g0418500|AK121255
(451 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0418500 U box domain containing protein 555 e-158
Os02g0540700 Similar to Arm repeat-containing protein 362 e-100
Os05g0439400 Similar to Arm repeat containing protein 103 3e-22
Os04g0437300 U box domain containing protein 89 5e-18
Os03g0240600 U box domain containing protein 89 7e-18
Os02g0548700 U box domain containing protein 87 2e-17
Os02g0732200 U box domain containing protein 87 2e-17
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 83 5e-16
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 82 7e-16
Os02g0690600 U box domain containing protein 80 2e-15
Os12g0161100 U box domain containing protein 79 5e-15
Os06g0248500 U box domain containing protein 78 1e-14
Os04g0589700 U box domain containing protein 78 1e-14
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 76 6e-14
Os02g0738200 U box domain containing protein 76 6e-14
Os01g0823900 Arm repeat protein 75 7e-14
Os08g0481200 Similar to Arm repeat containing protein 75 9e-14
Os08g0415600 U box domain containing protein 75 1e-13
Os09g0378700 U box domain containing protein 74 2e-13
Os01g0865700 U box domain containing protein 74 2e-13
Os02g0488701 U box domain containing protein 74 2e-13
Os05g0476700 Similar to Arm repeat protein 74 2e-13
Os03g0232600 U box domain containing protein 74 3e-13
Os04g0686000 U box domain containing protein 73 4e-13
Os09g0570000 Protein kinase domain containing protein 71 1e-12
Os02g0234300 U box domain containing protein 71 2e-12
Os10g0123100 70 3e-12
Os04g0489800 U box domain containing protein 70 3e-12
Os04g0417400 U box domain containing protein 70 4e-12
Os02g0539200 U box domain containing protein 69 5e-12
Os04g0348400 U box domain containing protein 69 7e-12
>Os04g0418500 U box domain containing protein
Length = 451
Score = 555 bits (1431), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/451 (66%), Positives = 300/451 (66%)
Query: 1 MGRKESSXXXXXXXXXXXXXXRSMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGV 60
MGRKESS RSMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGV
Sbjct: 1 MGRKESSTTTTTTAAAAAAATRSMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGV 60
Query: 61 TYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRXXXXXXXXXXXXXXXXXXVTSSP 120
TYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR VTSSP
Sbjct: 61 TYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRSLISHWSSSSPATSGDASVTSSP 120
Query: 121 AGLVRQVASPDADPSAALRQLAAYLSDDDVDEFEKNXXXXXXXXXXXXXXXLRRKGEREV 180
AGLVRQVASPDADPSAALRQLAAYLSDDDVDEFEKN LRRKGEREV
Sbjct: 121 AGLVRQVASPDADPSAALRQLAAYLSDDDVDEFEKNALVGAGGAAEAVASVLRRKGEREV 180
Query: 181 GVEGCEXXXXXXXXXXXMDGVEDANKRRVXXXXXXXXXXXXXXXXRVMRGASGLEARVDA 240
GVEGCE MDGVEDANKRRV RVMRGASGLEARVDA
Sbjct: 181 GVEGCEAAVRVLAAVVAMDGVEDANKRRVAAGLAADAAASAASLARVMRGASGLEARVDA 240
Query: 241 ARLVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXGPADEKGSLDARAVGAGLSCLATIXXX 300
ARLVEF GPADEKGSLDARAVGAGLSCLATI
Sbjct: 241 ARLVEFLLANAADEAREAVAESAELVAELVRLVGPADEKGSLDARAVGAGLSCLATISRS 300
Query: 301 XXXXXXEMVXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESAVGCAEGRAALCEDAEQAVP 360
EMV VLESAVGCAEGRAALCEDAEQAVP
Sbjct: 301 RRAARAEMVRAGTVRAAARALRATAADPAASARALRVLESAVGCAEGRAALCEDAEQAVP 360
Query: 361 AVVGRMMKAGRDGAEAAEAVLWAVCHKYXXXXXXXXXEASEGGLTRXXXXXQSGCSPAAR 420
AVVGRMMKAGRDGAEAAEAVLWAVCHKY EASEGGLTR QSGCSPAAR
Sbjct: 361 AVVGRMMKAGRDGAEAAEAVLWAVCHKYRDRRDADAAEASEGGLTRLLLLLQSGCSPAAR 420
Query: 421 QMALELLKIYKVNAKSCLAGYDSKTTHIMPF 451
QMALELLKIYKVNAKSCLAGYDSKTTHIMPF
Sbjct: 421 QMALELLKIYKVNAKSCLAGYDSKTTHIMPF 451
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/444 (51%), Positives = 254/444 (57%), Gaps = 18/444 (4%)
Query: 25 RLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLP 84
RL ++Q LEVK+P+FFRCPISLDVMRSPVSLCTGVTYDRASIQRW+DSGNTTCPATMLP
Sbjct: 63 RLAAEYQGLEVKVPTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLP 122
Query: 85 LPSTDLVPNLTLRXXXXXXXXXXXXXXXXXXVTSSPAG------LVRQVASPDADPSAAL 138
LPSTDLVPNLTLR P L+R+VA+P DP AL
Sbjct: 123 LPSTDLVPNLTLRRLIALWASTAAPSSPAAPSAVGPTPAAAAAELLRRVAAPGVDPCPAL 182
Query: 139 RQLAAYLSDDDVDEFEKNXXXXXXXXXXXXXXXLRRKGEREVG---VEGCEXXXXXXXXX 195
R+LAA+LSDDDVDEF+KN LRR+G+ + VE E
Sbjct: 183 RKLAAFLSDDDVDEFDKNALARAGGAAETVASVLRRRGKGDDDDGGVEAVEAAVRVLAVL 242
Query: 196 XXMDGVEDANKRRVXXXXXXXXX--XXXXXXXRVMRGASGLEARVDAARLVEF-----XX 248
D +E+ N+RRV RVMR SGLEARVDAARLVE
Sbjct: 243 ATSDCIEEENRRRVAAALAAGGAAPSVAASLARVMRSGSGLEARVDAARLVESLLRDGAR 302
Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXGPADEKGSLDARAVGAGLSCLATIXXXXXXXXXEM 308
GP DEKGSLDA+AV AGLSCLA I EM
Sbjct: 303 GATAPGVRAAVAESEELVAELIRLVGPTDEKGSLDAQAVDAGLSCLAAIVAATRRARAEM 362
Query: 309 VXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESAVGCAEGRAALCEDAEQAVPAVVGRMMK 368
V VLE+AVGCAEGRAA+CE AE A+PAVV RMM+
Sbjct: 363 VRLGAVPAAVRVLATDHHGGSHAQALR-VLEAAVGCAEGRAAVCEVAEAAIPAVVSRMMR 421
Query: 369 -AGRDGAEAAEAVLWAVCHKYXXXXXXXXXEASEGGLTRXXXXXQSGCSPAARQMALELL 427
G GAEAA +VLWAVCH+Y ASEGGLT+ QSGCSPAARQMA ELL
Sbjct: 422 CGGMGGAEAAVSVLWAVCHRYRDRRAVEAAAASEGGLTKLLLLMQSGCSPAARQMASELL 481
Query: 428 KIYKVNAKSCLAGYDSKTTHIMPF 451
K++KVNAKSCLAGYDSKTTHIMPF
Sbjct: 482 KMFKVNAKSCLAGYDSKTTHIMPF 505
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 22 RSMRLP-PQHQALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPA 80
R +R P P A P+ FRCPISL+VMRSPVSL TG TYDRASIQRWLD+G+ TCPA
Sbjct: 12 RRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPA 71
Query: 81 TMLPLPSTDLVPN 93
T LPL STDLVPN
Sbjct: 72 TRLPLASTDLVPN 84
>Os04g0437300 U box domain containing protein
Length = 426
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 35 VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPL-PSTDLVPN 93
+ IP FRCPISLD+ PV+LCTG TYDR I+RWL +G+ TCP TM PL +T LVPN
Sbjct: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
Query: 94 LTLR 97
TLR
Sbjct: 61 RTLR 64
>Os03g0240600 U box domain containing protein
Length = 445
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 32 ALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLV 91
A E+ IP+ FRCPISLD+MR PV+ TG+TYDR I+ WLD+G CP T PL DLV
Sbjct: 29 AAELAIPAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHEDLV 88
Query: 92 PNLTLR 97
PN +R
Sbjct: 89 PNHAIR 94
>Os02g0548700 U box domain containing protein
Length = 417
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 35 VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLP-STDLVPN 93
V++P +FRCPISL++MR PV++ TG TYDRASI+ W+ +GNTTCP T PL + L+PN
Sbjct: 16 VQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPN 75
Query: 94 LTLR 97
TLR
Sbjct: 76 HTLR 79
>Os02g0732200 U box domain containing protein
Length = 637
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 27 PPQHQALE-VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPL 85
P H+ + V IP FRCPISL++MR PV + TG TY+RA IQRW+D GN TCP T L L
Sbjct: 251 PETHKKSDAVAIPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQLKL 310
Query: 86 PSTDLVPNLTLR 97
+ L PN LR
Sbjct: 311 QNITLTPNYVLR 322
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
IP FRCPISL++M+ PV + +G TY+R+ IQ+WLDSG+ TCP T PL T L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 97 R 97
+
Sbjct: 288 K 288
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
+P FRCPISLD+M+ PV + TG TY+R I+RWL++G+ TCP T LP+ L PN L
Sbjct: 294 VPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVL 353
Query: 97 R 97
R
Sbjct: 354 R 354
>Os02g0690600 U box domain containing protein
Length = 425
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLD-SGNTTCPATMLPLPSTDLVPNLTL 96
P F CPIS+++M PV++ TGVTYDR SI+ WL G TTCPATM PL + DL PN TL
Sbjct: 8 PQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPLSNFDLTPNHTL 67
Query: 97 R 97
+
Sbjct: 68 K 68
>Os12g0161100 U box domain containing protein
Length = 437
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 33 LEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVP 92
+E P F CPISL M+ PV+ TG++YDR +I RWL +G+++CP T PL +DL P
Sbjct: 1 MEYGTPQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLSDLTP 60
Query: 93 NLTLR 97
NLTLR
Sbjct: 61 NLTLR 65
>Os06g0248500 U box domain containing protein
Length = 449
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 33 LEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVP 92
+EV +P+ F CPISL++MR PV+ TG+TYDR S++ WL G+ TCP T P+ DLVP
Sbjct: 34 VEVSVPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVP 93
Query: 93 NLTLR 97
N R
Sbjct: 94 NHATR 98
>Os04g0589700 U box domain containing protein
Length = 421
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRW-LDSGNTTCPATMLPLPSTDLVPNLTL 96
P F CPIS+++M PV++ TGVTYDR SI+RW G TTCPATM L S D PN TL
Sbjct: 6 PPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRLASFDFTPNHTL 65
Query: 97 R 97
+
Sbjct: 66 K 66
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 35 VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNL 94
+ IP FRCPISL++M+ PV + TG TY+RA I++W+ SG+ TCP T + ++ L PN
Sbjct: 214 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 273
Query: 95 TLR 97
LR
Sbjct: 274 VLR 276
>Os02g0738200 U box domain containing protein
Length = 456
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 22 RSMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPAT 81
R + PP+ A +P F CPISLD+MR PV+ TG+TYDR ++ WL+ G TCP T
Sbjct: 31 RQQQQPPEPAA---DVPDHFLCPISLDMMRDPVTAPTGITYDRDGVEVWLERGRPTCPVT 87
Query: 82 MLPLPSTDLVPNLTLR 97
PL +LVPN R
Sbjct: 88 GRPLRPEELVPNHATR 103
>Os01g0823900 Arm repeat protein
Length = 680
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR 97
PS FRCPISLD+MR PV + +G TYDR SI RW SG +TCP T L + +LV N L+
Sbjct: 275 PSDFRCPISLDLMRDPVVVASGQTYDRESIDRWFSSGKSTCPKTGQVLANLELVSNKALK 334
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 40/61 (65%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
IP+ F CPI+L +MR PV + TG TY+R SIQ+WLDSG TCP T L L PN L
Sbjct: 269 IPNDFLCPITLAIMRDPVIVATGQTYERRSIQKWLDSGERTCPKTRQRLSHMSLAPNYAL 328
Query: 97 R 97
+
Sbjct: 329 K 329
>Os08g0415600 U box domain containing protein
Length = 676
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR 97
P +CPI+L++M PV+L TG TYDRASI+RW+ SG TCP T L S D+VPN+ +R
Sbjct: 270 PEGLQCPITLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVR 329
>Os09g0378700 U box domain containing protein
Length = 712
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR 97
P +CPI+LD+M PV++ TG TYDRASI RW+ +G TCP T L + DLVPN LR
Sbjct: 291 PEALQCPITLDLMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLSTADLVPNTVLR 350
>Os01g0865700 U box domain containing protein
Length = 404
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 36 KIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDS--GNTTCPATMLPLPS-TDLVP 92
++PS+F CPISL +MR PV+L TG++YDRA+I RWL + TCP T PL +L P
Sbjct: 7 EVPSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHGLELTP 66
Query: 93 NLTLR 97
N TLR
Sbjct: 67 NHTLR 71
>Os02g0488701 U box domain containing protein
Length = 423
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
+P F CPIS ++MR PV L +G TYDR IQ WL +GN TCP T L +T L+PN +
Sbjct: 39 VPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIPNHLV 98
Query: 97 R 97
R
Sbjct: 99 R 99
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%)
Query: 41 FRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR 97
FRCPISLD+MR PV +G TYDR SI RW SG +TCP T L + +LVPN L+
Sbjct: 279 FRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLANLELVPNKALK 335
>Os03g0232600 U box domain containing protein
Length = 459
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
+P+ F CPISL+ M PV+LCTG TY+ A+I RWL G+ TCP TM L +PN TL
Sbjct: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
Query: 97 R 97
R
Sbjct: 125 R 125
>Os04g0686000 U box domain containing protein
Length = 413
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPL-PSTDLVPNLTL 96
PS+F CPISL +MR PV+L TG+TYDR I+RWL + TCP T P+ P D PN TL
Sbjct: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG-TCPLTKQPVPPDCDPTPNHTL 72
Query: 97 R 97
R
Sbjct: 73 R 73
>Os09g0570000 Protein kinase domain containing protein
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 36 KIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLT 95
+PS+F CPI DVMR P+ G TY+ +I+ W DSG+ T P T L LP DL+PN
Sbjct: 287 NVPSYFICPIQQDVMRDPLIAADGFTYEAEAIREWFDSGHYTSPMTNLDLPHRDLLPNHA 346
Query: 96 LR 97
LR
Sbjct: 347 LR 348
>Os02g0234300 U box domain containing protein
Length = 581
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
+P F CPISLD+MR PV TG TYDR SI +W++ G++TCP + L LVPN L
Sbjct: 150 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRAL 209
Query: 97 R 97
R
Sbjct: 210 R 210
>Os10g0123100
Length = 460
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 8/73 (10%)
Query: 33 LEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWL--------DSGNTTCPATMLP 84
LE+ +P FRCPISL++MR PV TG+TYDRA I+ WL + ++TCP T
Sbjct: 17 LELPVPPEFRCPISLELMRDPVVGPTGITYDRAGIEAWLLAAGAGKTAAASSTCPVTKGD 76
Query: 85 LPSTDLVPNLTLR 97
L + DLVPN LR
Sbjct: 77 LRADDLVPNHALR 89
>Os04g0489800 U box domain containing protein
Length = 800
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 23 SMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATM 82
SM LPP+ RCPISL +M PV + +G TY+RA I++W SGNTTCP T
Sbjct: 275 SMPLPPEE----------LRCPISLQLMHDPVIIASGQTYERACIEKWFSSGNTTCPKTR 324
Query: 83 LPLPSTDLVPNLTLR 97
L + PN ++
Sbjct: 325 NELSQLSMTPNYCIK 339
>Os04g0417400 U box domain containing protein
Length = 451
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 35 VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRW-LDSGNTTCPATMLPLPSTDL--V 91
V++ S+F CPISL++MR PV+L TG+TYDR SI+RW G+ CP T L D
Sbjct: 13 VEVLSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPT 72
Query: 92 PNLTLR 97
PN TLR
Sbjct: 73 PNHTLR 78
>Os02g0539200 U box domain containing protein
Length = 442
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Query: 36 KIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWL------DSGNTTCPAT--MLPLPS 87
++PS+F CPISL++MR PV+L TG+TYDR+SI+RW+ D G TCP T L
Sbjct: 7 EVPSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRRQLAPAE 66
Query: 88 TDLVPNLTLR 97
+ PN TLR
Sbjct: 67 REATPNHTLR 76
>Os04g0348400 U box domain containing protein
Length = 459
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 38 PSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLR 97
P+ F CPIS +MR PV + +G TYDR SIQ W +GN CP T L T ++PN +R
Sbjct: 76 PALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLSHTIVIPNHLVR 135
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,160,735
Number of extensions: 298711
Number of successful extensions: 820
Number of sequences better than 1.0e-10: 31
Number of HSP's gapped: 814
Number of HSP's successfully gapped: 32
Length of query: 451
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,605,545
Effective search space: 4027124115
Effective search space used: 4027124115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)