BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0105200 Os05g0105200|AK062492
(116 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0105200 Similar to Ras-related protein Rab-1B 226 3e-60
Os01g0558600 Ras-related protein RIC1 146 3e-36
Os01g0179700 Similar to GTP-binding protein YPTM2 143 2e-35
Os02g0653800 Similar to GTP-binding protein 143 3e-35
AK060839 141 1e-34
AK062838 127 2e-30
Os07g0195100 Similar to Ras-related protein ARA-3 93 5e-20
Os05g0461300 Similar to RAB8C 91 2e-19
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 91 2e-19
Os03g0819900 Similar to RAB8C 90 4e-19
Os05g0280200 Similar to Ras-related protein Rab11A 79 7e-16
Os10g0377400 Similar to Ras-related protein Rab11D 78 1e-15
Os03g0823700 Similar to Ras-related protein Rab11C 77 3e-15
Os01g0848700 Similar to Ras-related protein Rab11C 76 6e-15
Os05g0105100 Similar to Small GTPase rab11-related 74 2e-14
Os08g0525000 Ras GTPase family protein 72 6e-14
Os03g0843100 Ras GTPase family protein 70 4e-13
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 69 6e-13
Os04g0470100 Similar to Small GTP binding protein Rab2 68 2e-12
Os05g0564400 Similar to GTP-binding protein 67 2e-12
Os06g0551400 Ras-related protein RIC2 67 3e-12
AF327517 67 3e-12
Os09g0327100 Similar to GTP-binding protein 67 4e-12
Os03g0666500 Similar to Ras-related protein RHA1 65 1e-11
Os12g0631100 Ras small GTPase, Ras type family protein 65 1e-11
Os10g0208000 63 5e-11
Os05g0341600 Similar to Ras-related protein Rab-21 63 6e-11
Os01g0667600 Similar to GTP-binding protein 62 9e-11
>Os05g0105200 Similar to Ras-related protein Rab-1B
Length = 116
Score = 226 bits (576), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET
Sbjct: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPIQQQN 108
SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPIQQQN
Sbjct: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPIQQQN 108
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 146 bits (369), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 85/108 (78%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD ESFNNVKQWL+EIDRYAS++V KLLVGNKCDL +++VV E KA A+ +GI FLET
Sbjct: 91 TDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLET 150
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPIQQQN 108
SAK++ NVE+AF+TM+ +IK RMA+QPA + MRGQP+ QQ+
Sbjct: 151 SAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVAQQS 198
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 143 bits (361), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD ESFNNVKQWL+EIDRYASD+V KLLVGNK DL +KVV +E AKAFA+ +GI F+ET
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMET 150
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVE--RKPTVHIHMRGQPIQQQ 107
SAK + NVE+AF+ M++ IK RMA+QPA R PTV I RGQP+ Q+
Sbjct: 151 SAKNATNVEQAFMAMAASIKDRMASQPAASNARPPTVQI--RGQPVNQK 197
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 143 bits (361), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD ESFNNVKQWL+EIDRYASD+V KLLVGNK DL +KVV +E AKAFA+ +GI F+ET
Sbjct: 91 TDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMET 150
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAV--ERKPTVHIHMRGQPIQQQ 107
SAK + NVE+AF+ M++ IK RMA+QPA R PTV I RGQP+ Q+
Sbjct: 151 SAKNATNVEQAFMAMAASIKDRMASQPAAANARPPTVQI--RGQPVNQK 197
>AK060839
Length = 209
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TDMESFNNVK+W+SEID+YA+DSVCKLLVGNKCDL +S+VV+T A+A+A+ +GI FLET
Sbjct: 91 TDMESFNNVKEWMSEIDKYANDSVCKLLVGNKCDLAESRVVETAVAQAYADEIGIPFLET 150
Query: 61 SAKESINVEEAFLTMSSDIKK-RMATQPAVERKPTVHIHMRG 101
SAK+SINVEEAFL M + IKK + +Q A+ERK + + M+G
Sbjct: 151 SAKDSINVEEAFLAMCAAIKKQKSGSQAALERKASNLVQMKG 192
>AK062838
Length = 201
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD ESFNNVKQWL EIDRYA ++V KLLVGNK DL +VV T+ AK FAESLGI FLET
Sbjct: 91 TDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLET 150
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPIQQ 106
SAK + NVE AF+ M++ IKKRMA P KP + + G +++
Sbjct: 151 SAKNAANVETAFMMMAAQIKKRMANAPTAA-KPNAGVRLTGTSVKE 195
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD SFNN++ W+ I+++ASD+V K+LVGNK D+ +VV T + + A+ G+ F ET
Sbjct: 156 TDESSFNNIRNWIRNIEQHASDNVNKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFET 215
Query: 61 SAKESINVEEAFLTMSSDIKKRMA-TQPAVERKPTVHIHMRGQPIQ 105
SAK + NVE+ F T++ DIK+R+ T A PT+ I R +P Q
Sbjct: 216 SAKTNQNVEQVFFTIARDIKQRLTETVAAAAEPPTIQIS-RQEPDQ 260
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSK-VVDTEEAKAFAESLGISFLE 59
TD SFNN++ W+ I+++ASD+V K+LVGNK D+ +SK V T + +A A+ GI F E
Sbjct: 98 TDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFE 157
Query: 60 TSAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIH 98
TSAK ++NVE+ F +++ DIK+R+A + T+ I+
Sbjct: 158 TSAKTNLNVEQVFFSIARDIKQRLAETDSKPEDKTIKIN 196
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSK-VVDTEEAKAFAESLGISFLE 59
TD SFNN++ W+ I+++ASD+V K+LVGNK D+ +SK V T + +A A+ GI F E
Sbjct: 98 TDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFE 157
Query: 60 TSAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIH 98
TSAK ++NVE+ F +++ DIK+R+A + T+ I+
Sbjct: 158 TSAKTNLNVEQVFFSIARDIKQRLAETDSKTEDRTIKIN 196
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 89.7 bits (221), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSK-VVDTEEAKAFAESLGISFLE 59
TD SFNN++ W+ I+++ASD+V K+LVGNK D+ +SK V T + +A A+ GI F E
Sbjct: 98 TDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFE 157
Query: 60 TSAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRG 101
TSAK ++NVE+ F +++ DIK+R++ + T+ I G
Sbjct: 158 TSAKTNLNVEQVFFSIARDIKQRLSETDSKPEDRTIKIKSEG 199
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T +SF+NV +WL E+ +A S+ ++VGNK DL+ + V +E KA AE G+ FLET
Sbjct: 95 TKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLET 154
Query: 61 SAKESINVEEAFLTMSSDI 79
SA E++NVEEAF T+ +++
Sbjct: 155 SAMEAVNVEEAFQTIITEV 173
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T +SF+++ +WL E+ +A ++ +LVGNK DL D + V TE+AK FAE + FLET
Sbjct: 93 TKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEDERAVSTEDAKEFAEKENLFFLET 152
Query: 61 SAKESINVEEAFLTMSSDI-----KKRMATQP 87
SA ++ NVE AF T+ S+I KK MA P
Sbjct: 153 SALQATNVENAFQTVLSEIFKIHSKKNMAADP 184
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T ++F N+++WL E+ +A ++ ++VGNK DL + V E+ +A AE G+SFLET
Sbjct: 95 TKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLET 154
Query: 61 SAKESINVEEAFLTMSSDI-----KKRMATQPAVERKP 93
SA E++NVE+AF T+ DI KK +A Q A P
Sbjct: 155 SALEALNVEKAFQTILKDIHQIISKKALAAQEAAGSGP 192
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T ++F+NV++WL E+ +A ++ ++VGNK DL + V E+ AF+E G+SFLET
Sbjct: 95 TKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLET 154
Query: 61 SAKESINVEEAFLTMSSDI-----KKRMATQPAVERKPTVHIHMRGQPI 104
SA E+INVE+AF T+ S+I KK +A Q E T M+G I
Sbjct: 155 SALEAINVEKAFHTVLSEIHQIVSKKALAAQ---ESASTNGRSMQGTTI 200
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%)
Query: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
+F+N+ +WL E+ +A ++ +LVGNK DL + V T++A FAE+ G+S++ETSA E
Sbjct: 101 TFDNISRWLKELRDHADANIRIMLVGNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALE 160
Query: 65 SINVEEAFLTMSSDIKKRMATQP 87
+ NVEEAF + DI + ++ +P
Sbjct: 161 ATNVEEAFQLILGDIYRAISKKP 183
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
+F+NV +WL E++ ++ +V K+LVGNKCDL + + V EE KA AE+ G+ F+ETSA +
Sbjct: 100 TFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALD 159
Query: 65 SINVEEAF 72
S NV AF
Sbjct: 160 STNVRTAF 167
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T +F NVK+WL E+ +A ++ +L+GNK DL + V E+A +FAE G+SF+ET
Sbjct: 101 TKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVET 160
Query: 61 SAKESINVEEAFLTMSSDIKK 81
SA ++ NV++AF T+ ++I +
Sbjct: 161 SALDATNVDKAFQTVLTEIYR 181
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 53/76 (69%)
Query: 4 ESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAK 63
++F++V +WL+E+ ++ +V +LVGNK DL ++ V T E KA AES G+ F+ETSA
Sbjct: 100 QTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSAL 159
Query: 64 ESINVEEAFLTMSSDI 79
+S NV EAF T+ +I
Sbjct: 160 DSSNVAEAFQTVVKEI 175
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T E+FN++ WL + ++A+ ++ +LVGNK DL + V EE + FA+ G+ F+E
Sbjct: 89 TRRETFNHLASWLEDARQHANANMTIMLVGNKSDLSHRRAVSYEEGEQFAKEHGLIFMEA 148
Query: 61 SAKESINVEEAFLTMSSDIKKRM 83
SAK + NVEEAF+ + I K++
Sbjct: 149 SAKTAQNVEEAFVKTAGAIYKKI 171
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
+F NV++W+ E+ + ++ +LVGNK DL + V TE+AKAFAE F+ETSA E
Sbjct: 99 TFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALE 158
Query: 65 SINVEEAF 72
S+NVE AF
Sbjct: 159 SMNVENAF 166
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T +F NV++WL E+ + ++ +LVGNK DL V T+E KAFAE + F+ET
Sbjct: 97 TRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMET 156
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVE 90
SA ES NVE AF + + I R+ ++ +VE
Sbjct: 157 SALESTNVENAFAEVLTQI-YRIVSKRSVE 185
>AF327517
Length = 217
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T +F NV++WL E+ + ++ +LVGNK DL V T+E KAFAE + F+ET
Sbjct: 97 TRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMET 156
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVE 90
SA ES NVE AF + + I R+ ++ +VE
Sbjct: 157 SALESTNVENAFAEVLTQI-YRIVSKRSVE 185
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
+F NV++WL E+ + ++ +LVGNK DL + V E+AK FAE F+ETSA E
Sbjct: 99 TFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALE 158
Query: 65 SINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQPI 104
S+NVE AF + + I R+ ++ A++ RGQ I
Sbjct: 159 SMNVESAFTEVLTQI-YRVVSKKALDIGDDPAAPPRGQTI 197
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T+ SF K+W+ E+ + S L GNK DL++++ V EEAK +A+ G+ F+ET
Sbjct: 94 TNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETRQVQIEEAKTYAQENGLFFMET 153
Query: 61 SAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHIHMRGQP 103
SAK + NV + F ++ K+ + QPA + P + + +P
Sbjct: 154 SAKTATNVNDIFYEIA---KRLLQGQPA--QNPQAGMVLSQRP 191
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
T+ SF K+W+ E+ + + L GNK D+V+++ V EEAK +A+ G+ F+ET
Sbjct: 94 TNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEAKTYAQENGLFFMET 153
Query: 61 SAKESINVEEAFLTMSSDIKKRM 83
SAK +INV + F +I KR+
Sbjct: 154 SAKTAINVNDVF----HEIAKRL 172
>Os10g0208000
Length = 355
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 8 NVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESIN 67
++ WL + ++AS + +L+GNKCDL +VV +E + FA+ G+ F+E SAK + N
Sbjct: 89 DITSWLEDATQHASARMTIILIGNKCDLSHRRVVSYQEGEQFAKEHGLLFMEASAKTAHN 148
Query: 68 VEEAFLTMSSDIKKRM 83
VE+AF+ + + K++
Sbjct: 149 VEKAFILAARTVHKKI 164
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
TD ++F V +W+ E+ + A+ + + NK DLV SK +DT EA ++AES+G + T
Sbjct: 97 TDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLVRSKHIDTNEAASYAESIGATLFVT 156
Query: 61 SAKESINVEEAFLTMSSDIKKRM 83
SAK +++ F SDI KR+
Sbjct: 157 SAKAGTGIDDIF----SDIAKRL 175
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
+F N ++WL E+ + ++ +LVGNK DL + V E+A+AFAE+ G +ETSA E
Sbjct: 106 TFENAERWLKELRDHTDANIVVMLVGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALE 165
Query: 65 SINVEEAFLTMSSDIKK 81
+ NVE AF + + I +
Sbjct: 166 ATNVEGAFTEVLAQIYR 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.126 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,101,552
Number of extensions: 94510
Number of successful extensions: 290
Number of sequences better than 1.0e-10: 36
Number of HSP's gapped: 287
Number of HSP's successfully gapped: 36
Length of query: 116
Length of database: 17,035,801
Length adjustment: 83
Effective length of query: 33
Effective length of database: 12,702,039
Effective search space: 419167287
Effective search space used: 419167287
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 149 (62.0 bits)