BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0631200 Os04g0631200|AK059277
(232 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0631200 Similar to Xyloglucan endotransglycosylase (Fr... 424 e-119
Os11g0539200 Similar to Xyloglucan endotransglycosylase XET... 196 1e-50
Os06g0696600 Similar to Xyloglucan endo-transglycosylase ho... 184 4e-47
Os06g0697000 Similar to Xyloglucan endotransglycosylase (Fr... 183 7e-47
Os06g0696400 Similar to Xyloglucan endotransglucosylase/hyd... 181 3e-46
Os04g0604900 Similar to Xyloglucan endotransglycosylase (Fr... 166 1e-41
Os08g0237800 Similar to Xyloglucan endotransglycosylase (Fr... 165 3e-41
Os04g0604300 Similar to Xyloglucan endotransglucosylase/hyd... 162 2e-40
Os08g0240533 Glycoside hydrolase, family 16 domain containi... 160 7e-40
Os08g0240566 160 1e-39
Os04g0604200 Similar to Xyloglucan endotransglycosylase (Fr... 157 5e-39
Os06g0335900 Similar to Xyloglucan endotransglycosylase XET... 154 6e-38
Os02g0280200 Similar to Xet3 protein 151 4e-37
Os03g0108300 Similar to Cellulase (EC 3.2.1.4) 149 1e-36
Os10g0545500 Similar to Cellulase (EC 3.2.1.4) (Fragment) 149 2e-36
Os04g0604800 Similar to Xyloglucan endotransglycosylase (Fr... 145 3e-35
Os02g0280300 Similar to Xyloglucan endotransglycosylase (Fr... 143 1e-34
Os08g0237000 Xyloglucan endotransglycosylase/hydrolase prot... 141 4e-34
Os02g0823700 135 4e-32
Os02g0127800 Concanavalin A-like lectin/glucanase domain co... 131 3e-31
Os03g0239000 Glycoside hydrolase, family 16 domain containi... 127 7e-30
Os03g0854600 Concanavalin A-like lectin/glucanase domain co... 103 7e-23
Os10g0577500 Glycoside hydrolase, family 16 domain containi... 103 1e-22
Os02g0696500 Concanavalin A-like lectin/glucanase domain co... 100 1e-21
Os07g0529700 Similar to Xyloglucan endo-transglycosylase-li... 96 2e-20
Os06g0237400 Similar to Xyloglucan endotransglycosylase pre... 79 2e-15
Os10g0117000 Glycoside hydrolase, family 16 domain containi... 70 1e-12
Os09g0395600 Concanavalin A-like lectin/glucanase domain co... 65 4e-11
>Os04g0631200 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 232
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/232 (88%), Positives = 205/232 (88%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN
Sbjct: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
PSQVVFLVDDTPIRVYENKNATAAVKGHHRH VY
Sbjct: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHAAAANGTSNATSAAASVPPFPSPQPMSVY 120
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG
Sbjct: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
Query: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPECAGR 232
KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPECAGR
Sbjct: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPECAGR 232
>Os11g0539200 Similar to Xyloglucan endotransglycosylase XET2 (Fragment)
Length = 295
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 130/229 (56%), Gaps = 38/229 (16%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
LSS +H+E DFEFLGN TGEPY++QTN++ G G+REQRI LWFDPT D+H+Y+VLWN
Sbjct: 99 LSSQNSEHDEIDFEFLGNRTGEPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWN 158
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
+ F VDDTPIRV++N ++ +Y
Sbjct: 159 LYMIAFFVDDTPIRVFKNSKDLGVRYPFNQ-------------------------PMKLY 193
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
SS+WNADDWAT+GGR KTDWS APFVA++R V+GC +A E C
Sbjct: 194 SSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGCEASA--------EARYC-----A 240
Query: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
+G WW + + +L Q +L W R H +Y+YC D +R+P PEC
Sbjct: 241 TQGARWWDQPEFRDLDADQYRRLAWVRKTHTIYNYCDDRERYPAMSPEC 289
>Os06g0696600 Similar to Xyloglucan endo-transglycosylase homolog
Length = 288
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 127/233 (54%), Gaps = 42/233 (18%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
LSS G +H+E DFEFLGN +GEPY V TN+Y G G REQ+ +WFDPT DFHTY+VLWN
Sbjct: 97 LSSQGSQHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTKDFHTYSVLWN 156
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
PS ++F VD TPIR Y N AT V VY
Sbjct: 157 PSHILFYVDGTPIREYRNTEATTGVA------------------------FPRAQAMRVY 192
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
+S+W+A++WATQGGRV+TDWS APF A++R + GC T DA A GS W
Sbjct: 193 ASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC------TSQDATACAN-PGSPWM 245
Query: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPV-QPPECAGR 232
+ ++L +L + +++Y+YC DT RFP PPEC +
Sbjct: 246 YQ----------QQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK 288
>Os06g0697000 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 310
Score = 183 bits (465), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 130/237 (54%), Gaps = 40/237 (16%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
LSS G H+E DFEFLGNVTGEPY + TN++ G G RE + LW+DPT DFHTY++LWN
Sbjct: 106 LSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREMQFRLWYDPTKDFHTYSILWN 165
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
P ++F+VDD PIR + N ++ +Y
Sbjct: 166 PKHIIFMVDDMPIRDFRNLEGKGIAFPKNQ-------------------------PMRLY 200
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
SS+WNADDWATQGGRVKTDW+HAPF A++R R + C A AG RC G++ G
Sbjct: 201 SSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVA-------AGGRTRC-GATVG 252
Query: 181 KEGRYWWKEKDM------EELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
+ +EL + + ++ W ++ +++Y+YC D RFP P EC+
Sbjct: 253 TDAAPGTGAAAAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 309
>Os06g0696400 Similar to Xyloglucan endotransglucosylase/hydrolase protein 24
precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem
protein 5) (MERI-5 protein) (MERI5 protein)
(Endo-xyloglucan transferase) (Xyloglucan
endo-1,4-beta-D-glucanase)
Length = 259
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 121/233 (51%), Gaps = 52/233 (22%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
LSS G H+E DFEFLGNVTGEPY + TN++ G G REQ+ LWFDPT FHTY+++WN
Sbjct: 78 LSSQGSTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTQSFHTYSIIWN 137
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
P V+F VD TPIR ++N A VY
Sbjct: 138 PQHVIFAVDGTPIRDFKNHEARGVA-------------------------FPKSQPMRVY 172
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWG 180
+S+WNADDWATQGGRVK DWS APFVA+FRD + C W S+ G
Sbjct: 173 ASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVW------SNGG----------- 215
Query: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPV-QPPECAGR 232
WW +EL+ ++ W + ++Y+YC D RFP P EC R
Sbjct: 216 -----WWN----QELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR 259
>Os04g0604900 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 321
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 126/235 (53%), Gaps = 33/235 (14%)
Query: 1 LSSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWN 60
L+S GD H+E DFEFLGNV+GEPY++ TN++ G GNREQ+ LWFDPTADFH Y +LWN
Sbjct: 106 LTSEGDAHDEIDFEFLGNVSGEPYVMHTNVFAQGRGNREQQFYLWFDPTADFHNYTILWN 165
Query: 61 PSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVY 120
P ++F VD +RV++N A V+
Sbjct: 166 PLNIIFSVDGKAVRVFKNHEAAGV-------------------------PYPSGQAMRVH 200
Query: 121 SSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAA----NATDSDAGEVARCTG 176
+S+WN D WAT+GG+VK +W+ APFVA++R CA A +G++ T
Sbjct: 201 ASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAGGGGGGPCTSGQLPNSTS 260
Query: 177 SSWGKEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
S + W ++ +L + WARA++++YDYC D RFP P EC+
Sbjct: 261 SPSTCDCGGAWMDR---QLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 312
>Os08g0237800 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 301
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 121/224 (54%), Gaps = 43/224 (19%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVVFL 67
H+E D EFLGNVTGEPY + TN++ +GVG REQ+ LWFDPTADFHTY+++WNP ++ L
Sbjct: 116 HDEVDLEFLGNVTGEPYTLHTNIFANGVGGREQQFRLWFDPTADFHTYSIVWNPKHIIIL 175
Query: 68 VDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWNAD 127
VD PIR Y N TAA G + S+WNAD
Sbjct: 176 VDGVPIRDYRN---TAARGG---------------------PAFPTWQKMRAHGSLWNAD 211
Query: 128 DWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRYWW 187
DWATQGGRVKTDWS APF A +R +RV CA + VA C W+
Sbjct: 212 DWATQGGRVKTDWSEAPFFAYYRGLRVTPCAPSPG--------VAWCGDE---PPESPWF 260
Query: 188 KEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ--PPEC 229
+++M+ + + AR HL+YDYC DT RF P EC
Sbjct: 261 DQQEMDAAALSK------ARQEHLLYDYCEDTKRFKDTGLPVEC 298
>Os04g0604300 Similar to Xyloglucan endotransglucosylase/hydrolase protein 24
precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem
protein 5) (MERI-5 protein) (MERI5 protein)
(Endo-xyloglucan transferase) (Xyloglucan
endo-1,4-beta-D-glucanase)
Length = 280
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 117/226 (51%), Gaps = 51/226 (22%)
Query: 6 DKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
D H+E D EFLGNVTG+PY + TN++ +G G +EQ+ LWFDPT DFHTY+++W ++
Sbjct: 103 DIHDEVDLEFLGNVTGQPYTLHTNVFANGTGGKEQQFHLWFDPTTDFHTYSIVWTSQHIL 162
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
LVD TPIR +N A KG +Y S+WN
Sbjct: 163 VLVDGTPIREMKNH----ADKG---------------------IAYPSSQRMRLYGSLWN 197
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRY 185
ADDWATQGGRVKTDWS APFVA +R+ A +++ D
Sbjct: 198 ADDWATQGGRVKTDWSQAPFVARYRNFTATEAASSSSPAGYD------------------ 239
Query: 186 WWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
+++ + WAR +++VYDYC D+ RFP PPEC+
Sbjct: 240 -------QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 278
>Os08g0240533 Glycoside hydrolase, family 16 domain containing protein
Length = 264
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 113/224 (50%), Gaps = 43/224 (19%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVVFL 67
H+E D EFLGN TGEPY + TNLY G G RE+R LWFDPTADFHTY ++WN ++ L
Sbjct: 81 HDEIDLEFLGNSTGEPYTLHTNLYARGKGGREKRYKLWFDPTADFHTYTIIWNQRNILIL 140
Query: 68 VDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWNAD 127
VDD IR +N + ++ VY SIWNAD
Sbjct: 141 VDDKLIRQIKNNLMYSVPYPTYQ-------------------------PMRVYGSIWNAD 175
Query: 128 DWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRYWW 187
DWAT GGRVKTDWS APF A FR+ R C + + G S G W+
Sbjct: 176 DWATMGGRVKTDWSQAPFTAYFRNYRAIACP---------PQQSSPLCGQSSGN----WF 222
Query: 188 KEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
+EL V + QL A++ +YDYC DT RF P EC
Sbjct: 223 N----QELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECT 262
>Os08g0240566
Length = 367
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 119/233 (51%), Gaps = 51/233 (21%)
Query: 6 DKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
D H+E D EFLGN TGEPY + TN+Y G G RE++ LWFDPT DFHTY ++WNP ++
Sbjct: 180 DIHDEIDLEFLGNTTGEPYTLHTNIYARGTGGREKQYRLWFDPTEDFHTYTIIWNPQMIL 239
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
LVD TPIR +N+ ++ +Y+SIW+
Sbjct: 240 ILVDGTPIRQMKNQLRNDIPFPLYQ-------------------------PMRLYASIWD 274
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGC-----AWAANATDSDAGEVARCTGSSWG 180
ADDWATQGGR+KTDWS APF A FR+ + C AW + +D+
Sbjct: 275 ADDWATQGGRIKTDWSQAPFTAFFRNYQANACIPYKTAWICSQGSNDSS----------- 323
Query: 181 KEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPV-QPPECAGR 232
W +D++E +L ++ +YDYC D+ R+P PPEC +
Sbjct: 324 ------WFTQDLDE---EGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPECGSQ 367
>Os04g0604200 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 293
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 39/226 (17%)
Query: 6 DKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
+ H+E D EFLGNVTG+PY + TN++ +G G RE + LWFDPT DFHTY+V+WNP +++
Sbjct: 104 NTHDEIDLEFLGNVTGQPYTLHTNIFANGEGGREVQYRLWFDPTQDFHTYSVIWNPDEIL 163
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
LVD+ PIR ++N + ++ ++ +W+
Sbjct: 164 ILVDNMPIRQFKNHLDSGVPFPIYQ-------------------------PMRLFGCLWD 198
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRY 185
ADDWAT+GGR+KTDWS APFVA FR+ +GC ++ A G +
Sbjct: 199 ADDWATEGGRIKTDWSQAPFVAYFRNYTADGCVPSSYAWVCGQGPASSSD---------- 248
Query: 186 WWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFP-VQPPECA 230
W ++ +++ V Q QL A+ +++Y+YC D +RFP P EC
Sbjct: 249 -WFDRGLDD--VKQQQQLREAQDKYMIYNYCNDPERFPDGYPKECG 291
>Os06g0335900 Similar to Xyloglucan endotransglycosylase XET2 (Fragment)
Length = 311
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 119/247 (48%), Gaps = 50/247 (20%)
Query: 2 SSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNP 61
SS GDKH+E DFEFLGN +G PY TN++ DGVG+RE + WFDPT +H Y + WNP
Sbjct: 93 SSIGDKHDEIDFEFLGNSSGLPYTFHTNVFADGVGSREMQFRPWFDPTDGYHNYTIFWNP 152
Query: 62 SQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYS 121
+V+ VD PIRV+ N R +S
Sbjct: 153 CMIVWFVDSIPIRVFRNHEKEGVPFPTKR-------------------------PMYAFS 187
Query: 122 SIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATD---------------- 165
SIW A+DWATQGGRVKTDW+ APFVA +RD+ + C + +
Sbjct: 188 SIWAAEDWATQGGRVKTDWTKAPFVAEYRDIGLNICECPGSGSGSSSSFSSSSSSTSGDA 247
Query: 166 SDAGEVARCTGSSWGKEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDR--FP 223
D RC S +W+ + + +L+ Q Q+ + + +YDYC D P
Sbjct: 248 EDPACAQRCATSD------HWYAAEGLCQLSDKQLRQMKAVQLGYTIYDYCADAQAKGRP 301
Query: 224 VQPPECA 230
V PPEC+
Sbjct: 302 V-PPECS 307
>Os02g0280200 Similar to Xet3 protein
Length = 296
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 37/230 (16%)
Query: 2 SSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNP 61
SS GDKH+E DFEFLGN TG+PY + TN+Y +GVG++E + WFDPT H Y + W P
Sbjct: 99 SSLGDKHDEIDFEFLGNETGQPYTIHTNVYANGVGDKEMQFKPWFDPTDGSHNYTISWTP 158
Query: 62 SQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYS 121
++V+ +D PIRV+ N ++ V YS
Sbjct: 159 CRIVWYIDGMPIRVFRNYQSSNGVA------------------------FPTWQPMYAYS 194
Query: 122 SIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGK 181
SIW A+DWATQ GRVKTDWS APFVA + + ++ C + G+ +++ +
Sbjct: 195 SIWAAEDWATQKGRVKTDWSKAPFVANYHGIDLDVC-------ECYGGDCVYGCAAAFNQ 247
Query: 182 EGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
G ++LT + Q+ W + + +YDYCVD RF Q PEC+
Sbjct: 248 GGG-----CAGQQLTGDEMGQMKWVQDNFRIYDYCVDYKRFNGQMAPECS 292
>Os03g0108300 Similar to Cellulase (EC 3.2.1.4)
Length = 310
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 109/228 (47%), Gaps = 49/228 (21%)
Query: 7 KHNEFDFEFLGNVTGEPYLVQTNLYIDGVGN-----REQRIDLWFDPTADFHTYAVLWNP 61
+H+E D E LG V GEP+ +QTN+Y+ G G+ RE R LWFDPTADFH YA+LWNP
Sbjct: 127 QHDEIDIELLGTVPGEPWTLQTNVYVHGTGDGAIIGREMRFHLWFDPTADFHHYAILWNP 186
Query: 62 SQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYS 121
+VFLVDD P+R Y Y
Sbjct: 187 DHIVFLVDDVPVRRYPRAAGNT----------------------------FPDRQMWAYG 218
Query: 122 SIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGK 181
SIW+A DWAT GGR K+D+ + PFV+ +RD+++ GC AA A+ S G
Sbjct: 219 SIWDASDWATDGGRYKSDYRYQPFVSRYRDLKIAGCEAAAPAS------CQPVPASPSGA 272
Query: 182 EGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
G EL+ Q + WA+ +VY YC D R PEC
Sbjct: 273 TG----------ELSAQQKAAMRWAQQRSMVYYYCQDYSRNHANYPEC 310
>Os10g0545500 Similar to Cellulase (EC 3.2.1.4) (Fragment)
Length = 306
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 111/227 (48%), Gaps = 49/227 (21%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGN-----REQRIDLWFDPTADFHTYAVLWNPS 62
H+E D E LG V GEPY +QTN+Y+ G G+ RE R LWFDPTA FH YA+LWNP
Sbjct: 124 HDEIDMELLGTVPGEPYTLQTNVYVRGSGDGNIVGREMRFHLWFDPTAGFHHYAILWNPD 183
Query: 63 QVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSS 122
Q++FLVDD PIR YE K V+G Y S
Sbjct: 184 QILFLVDDVPIRRYEKK-----VEG-----------------------TFPEREMWAYGS 215
Query: 123 IWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKE 182
IW+A DWAT GGR + D+ + PFV+ F D++V GCA AA S SS G
Sbjct: 216 IWDASDWATDGGRYRADYRYQPFVSRFADLKVGGCATAAPPACSP------VPASSGGGS 269
Query: 183 GRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
L+ Q + WA+ + +VY YC D R PEC
Sbjct: 270 A----------ALSPQQEAAMAWAQRNAMVYYYCQDYSRDHTFYPEC 306
>Os04g0604800 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 284
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 53/225 (23%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVVFL 67
H+E D EFLGNVTGEPY + TN++ +GVG REQ+ LWFDPTAD+HTY+++WNP +++ L
Sbjct: 109 HDEIDLEFLGNVTGEPYTLHTNIFANGVGGREQQFRLWFDPTADYHTYSIVWNPKRILIL 168
Query: 68 VDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWNAD 127
VD IR ++N N V + ++W+A+
Sbjct: 169 VDGKAIRDFKN-NEDQGVP---------------------------------FPTLWSAE 194
Query: 128 DWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRYWW 187
DWATQGGRVKTDW APFV +R+ V C + VA C G E
Sbjct: 195 DWATQGGRVKTDWKQAPFVTYYRNYNVTWC--------RPSPGVAWC-----GDEP---- 237
Query: 188 KEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRF--PVQPPECA 230
K+ +L + L W R++ ++Y+YC D+ RF P EC
Sbjct: 238 KDSTRFDLDANTLSDLQWVRSNSMIYNYCDDSVRFNATTLPKECT 282
>Os02g0280300 Similar to Xyloglucan endotransglycosylase (Fragment)
Length = 291
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 115/230 (50%), Gaps = 34/230 (14%)
Query: 2 SSGGDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNP 61
SS GD H+E DFEFLGN TG+PY + TN+Y +GVG++E + WF+PT +H Y V W
Sbjct: 92 SSVGDNHDEIDFEFLGNETGQPYTIHTNIYANGVGDKEMQFKPWFNPTDGYHNYTVSWTA 151
Query: 62 SQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYS 121
+V+ +D TPIRV+ N + V + YS
Sbjct: 152 CMIVWYIDGTPIRVFRNYEKSNGVAFPMKRPMYG------------------------YS 187
Query: 122 SIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGK 181
SIW A+DWATQGGRVK DWS APFVA + + + C + + ++ A+C + K
Sbjct: 188 SIWAAEDWATQGGRVKADWSKAPFVANYHGLNINVCECSTTSGGGNSC-AAKCASTYNSK 246
Query: 182 EGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPECA 230
+ ++ + Q+ + +Y+YCVD R+ P EC+
Sbjct: 247 SSVCQLSDSELARMRKVQD--------EYRIYNYCVDPKRYNGSVPVECS 288
>Os08g0237000 Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC
2.4.1.207) (End-xyloglucan transferase) (OsXTH8)
(OsXRT5)
Length = 290
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 45/233 (19%)
Query: 1 LSSG-GDKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLW 59
LSSG GD H+E D EF+GN++G PY++ TN++ +G G +E + LWFDPTADFHTY ++W
Sbjct: 96 LSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIW 155
Query: 60 NPSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXV 119
NP ++F VDD P+R ++ + A + +
Sbjct: 156 NPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMR---------------------------L 188
Query: 120 YSSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSW 179
++++W+ WAT+ G VK DWS APFV ++R C ++ AG + SSW
Sbjct: 189 HATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNAC-----VNNNPAGGWS----SSW 239
Query: 180 GKEGRYWW--KEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQ-PPEC 229
EG W +E D EL + WA +++ Y+YC D RFP P EC
Sbjct: 240 CPEGTSAWIHRELDGAELGT-----VAWAERNYMSYNYCADGWRFPQGFPAEC 287
>Os02g0823700
Length = 327
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 108/228 (47%), Gaps = 53/228 (23%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGN------REQRIDLWFDPTADFHTYAVLWNP 61
H+E D EFLG G+PY +QTN++ G G+ RE + LWFDPTADFH YA+LW
Sbjct: 127 HDEVDMEFLGTTPGKPYTLQTNVFSLGSGDPPRSLGREIKFHLWFDPTADFHHYAILWTS 186
Query: 62 SQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYS 121
++FLVDD PIR Y ++A A R VY
Sbjct: 187 DHIIFLVDDVPIRRYGRRSAGGAAGFPAR-------------------------PMWVYG 221
Query: 122 SIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGK 181
SIW+A WAT+ GR + D+S+ PFVA F + GC + +A + A VA
Sbjct: 222 SIWDASSWATEDGRYRADYSYQPFVARFSAFLLRGC--SPHAPRTCAAPVA--------- 270
Query: 182 EGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
+LT Q + WA+ H+VY+YC D R PEC
Sbjct: 271 -----------GDLTAAQLAAMRWAQRFHMVYNYCYDPKRDHSLTPEC 307
>Os02g0127800 Concanavalin A-like lectin/glucanase domain containing protein
Length = 340
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 40/234 (17%)
Query: 2 SSGGD----KHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNR--EQRIDLWFDPTADFHTY 55
+S GD +H+E DFEFLGN+ G+P+ VQTN+Y +G +R E+R L FDPT +FH Y
Sbjct: 100 TSNGDVIEKRHDELDFEFLGNIRGKPWRVQTNVYGNGSVSRGREERYLLPFDPTTEFHRY 159
Query: 56 AVLWNPSQVVFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXX 115
++LW + +VF VDD PIR T A+ G
Sbjct: 160 SILWTRAAIVFFVDDVPIR---EVRRTPAMTGDF-----------------------PSK 193
Query: 116 XXXVYSSIWNADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCT 175
+Y+++W+A WAT GGR + ++ + PFVA+F D+ + GC G++
Sbjct: 194 PMSIYATVWDASTWATSGGRYRVNYRYGPFVASFTDLALLGC-----RVGDPIGQMLSSA 248
Query: 176 GSSWGKEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
+ ++ D+ +T+ + + R ++VY YC DT R+P EC
Sbjct: 249 ACTAAEDA---LLASDLAVMTLEKQQAMRRFREQNMVYSYCYDTLRYPAPFLEC 299
>Os03g0239000 Glycoside hydrolase, family 16 domain containing protein
Length = 338
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 102/225 (45%), Gaps = 49/225 (21%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDG--VGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
H+E DFEFLGNV G + VQTN+Y +G RE+R LWFDPT DFH YA+ W+ ++
Sbjct: 122 HDELDFEFLGNVRGREWRVQTNVYGNGSTAAGREERYGLWFDPTQDFHRYAIRWSHDTII 181
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
F VD+TPIR + A +Y++IW+
Sbjct: 182 FYVDETPIREVVRTASMGA--------------------------QFPSKPMSLYATIWD 215
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGCAWAANATDSDAGEVARCTGSSWGKEGRY 185
WAT GGR K ++ +AP+VA F D+ + GC AG C G++
Sbjct: 216 GSSWATSGGRYKVNYKYAPYVAEFTDLLLHGC---------PAGSPPPCEGAAASA---- 262
Query: 186 WWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPECA 230
+ Q + RA H+ Y YC D R+ PEC+
Sbjct: 263 --------TMPPGQRSAMERFRARHMTYGYCYDRVRYHAPLPECS 299
>Os03g0854600 Concanavalin A-like lectin/glucanase domain containing protein
Length = 361
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 101/239 (42%), Gaps = 59/239 (24%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGNR--EQRIDLWFDPTADFHTYAVLWNPSQVV 65
H+E DFEFLGN + +QTN+Y +G +R E+R + FDPTAD H +++LW+ +V
Sbjct: 111 HDELDFEFLGNRYRHEWKMQTNVYGNGSTDRGREERYLMPFDPTADAHRFSILWHSRLIV 170
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
F VD PIR A A +Y +IW+
Sbjct: 171 FYVDGVPIREVPRTAAMGA--------------------------DYPSKPMALYVTIWD 204
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGCA------WAANATDSDAGEVARCTGSSW 179
WAT G+ K ++ PF A F D+ + GC A A D D RC +
Sbjct: 205 GSTWATDNGKYKVNYKRGPFTAVFSDLVLRGCTARSDIRLATTADDQD-----RCAAA-- 257
Query: 180 GKEGRYWWKEKDMEE---------LTVHQNHQLVWARAHHLVYDYCVDTDRFPVQPPEC 229
E+D+ E +T + + R ++Y C DT+R+P PEC
Sbjct: 258 ---------EEDLMESDEYSSTMAMTARKRMAMRRFRQRQMLYTVCYDTNRYPEPFPEC 307
>Os10g0577500 Glycoside hydrolase, family 16 domain containing protein
Length = 323
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 100/234 (42%), Gaps = 64/234 (27%)
Query: 7 KHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNR--EQRIDLWFDPTADFHTYAVLWNPSQV 64
+H+E DFE LGN G + VQTN+Y +G R E+R L FDPTA H+YA+ W P+ V
Sbjct: 106 QHDELDFELLGNRRGHAWHVQTNMYGNGSTGRGREERYLLPFDPTAAPHSYAIAWTPAAV 165
Query: 65 VFLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIW 124
+F +D PIR ++ VY++IW
Sbjct: 166 IFYIDAIPIRELVRCSS----------------------------GDYPAKPMSVYATIW 197
Query: 125 NADDWATQGGRVKTDWSHAPFVATFRDVRVEG------CAWAANATDSDAGEVARCTGSS 178
+ WAT GGR K D+++APF A F D+ V G CA T EVA T +
Sbjct: 198 DGSAWATDGGRHKVDYAYAPFTAVFSDLVVTGGTDDDHCAAMGLMTS----EVAVMTPAK 253
Query: 179 WGKEGRYWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRF---PVQPPEC 229
G R+ R+ HL Y C DT R+ V PEC
Sbjct: 254 RGSMRRF---------------------RSRHLTYSACYDTVRYNGTGVVFPEC 286
>Os02g0696500 Concanavalin A-like lectin/glucanase domain containing protein
Length = 351
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDG--VGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
H+E DFEFLG+ G + VQTN Y +G RE+R L FDPT + H Y+VLW P+ ++
Sbjct: 111 HDELDFEFLGSRWGGQWRVQTNAYGNGSTARGREERYLLPFDPTLEAHRYSVLWAPTHII 170
Query: 66 FLVDDTPIRVYENKNATAAVKGHHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSSIWN 125
F +DDTPIR VY++IW+
Sbjct: 171 FYIDDTPIREVIRHPGMGG--------------------------DFPSKPMAVYATIWD 204
Query: 126 ADDWATQGGRVKTDWSHAPFVATFRDVRVEGC-AWAANATDSDAGEVARCTGSSWGKEGR 184
WAT GG+ K ++ +APF + F D+ + GC A D G G+ +
Sbjct: 205 GSTWATDGGKYKVNYKYAPFASEFSDLALLGCRADPVLRAPRDGG------GAGCAEPDL 258
Query: 185 YWWKEKDMEELTVHQNHQLVWARAHHLVYDYCVDTDRFPVQP-PEC 229
D +T + + RA H+ Y C D R+ P PEC
Sbjct: 259 LGLLTADYAVMTPRKRAAMRAFRARHMTYTVCYDAVRYAAGPFPEC 304
>Os07g0529700 Similar to Xyloglucan endo-transglycosylase-like protein
Length = 172
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 49/59 (83%)
Query: 7 KHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
+ +E DFEFLGN TGEPY++QTN+Y GVG RE R LWFDPTADFH+Y++LWNP Q+V
Sbjct: 114 QRDELDFEFLGNRTGEPYIIQTNVYRSGVGGREMRHSLWFDPTADFHSYSILWNPKQIV 172
>Os06g0237400 Similar to Xyloglucan endotransglycosylase precursor (EC
2.4.1.207)
Length = 67
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 6 DKHNEFDFEFLGNVTGEPYLVQTNLYIDGVGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
D +E DFEFLG+ G P +QTN+++ G G+REQR+ LWFDP ADFH Y++LWNP +V
Sbjct: 8 DVQDEVDFEFLGDKDGNPITLQTNVFVGGHGDREQRLRLWFDPAADFHDYSILWNPFHLV 67
>Os10g0117000 Glycoside hydrolase, family 16 domain containing protein
Length = 147
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDGVGN--REQRIDLWFDPTADFHTYAVLWNPSQVV 65
H+E DFEFLGN+ G + VQTN+Y +G + RE+R LWFDPT DFH YA+LW+ +V
Sbjct: 88 HDELDFEFLGNIKGREWRVQTNVYGNGSTSVGREERYGLWFDPTEDFHRYAILWSHDWIV 147
>Os09g0395600 Concanavalin A-like lectin/glucanase domain containing protein
Length = 218
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 8 HNEFDFEFLGNVTGEPYLVQTNLYIDG--VGNREQRIDLWFDPTADFHTYAVLWNPSQVV 65
H+E DFEFLGNV G + VQTN+Y +G RE+R DL FDPT + H Y++LW +++
Sbjct: 120 HDEVDFEFLGNVRGREWRVQTNVYGNGSTAAGREERYDLPFDPTDELHHYSILWTRRRIM 179
Query: 66 FLVDDT 71
+ T
Sbjct: 180 SAISKT 185
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,570,316
Number of extensions: 331506
Number of successful extensions: 658
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 632
Number of HSP's successfully gapped: 47
Length of query: 232
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 134
Effective length of database: 11,918,829
Effective search space: 1597123086
Effective search space used: 1597123086
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)