Os04g0631200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xyloglucan endotransglycosylase (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os04g0631200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xyloglucan endotransglycosylase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.84 | 0.689 | 3.44 | -0.754 | 0.387 | -0.982 | -0.814 | -1.4 | -0.121 | 5.49 | 6.1 | 4443 | -- | -- |
| 216.19 | 0.685 | 3.46 | -0.726 | 0.387 | -0.792 | -0.802 | -- | -0.117 | 5.45 | 6.085 | 4436 | -- | -- |
| 216.26 | 0.685 | 3.44 | -0.754 | 0.388 | -0.963 | -- | -1.36 | -0.12 | 5.03 | 6.067 | 4423 | -- | -- |
| 217.41 | 0.687 | 3.47 | -0.746 | 0.401 | -0.773 | -- | -- | -0.147 | 4.93 | 6.091 | 4424 | -- | -- |
| 222.87 | 0.695 | 3.45 | -0.752 | -- | -0.979 | -- | -1.3 | -0.0934 | -- | 6.1 | 4626 | -- | -- |
| 226.81 | 0.706 | 3.47 | -0.468 | 0.411 | -- | -0.602 | -- | -0.106 | 4.98 | -- | -- | -- | -- |
| 227.61 | 0.707 | 3.47 | -0.468 | 0.407 | -- | -- | -- | -0.103 | 4.55 | -- | -- | -- | -- |
| 223.87 | 0.697 | 3.47 | -0.731 | -- | -0.799 | -- | -- | -0.103 | -- | 5.586 | 4702 | -- | -- |
| 229.56 | 0.706 | 3.46 | -- | 0.389 | -0.441 | -- | -- | -0.0696 | 4.92 | 5.9 | 4423 | -- | -- |
| 236.44 | 0.719 | 3.47 | -0.452 | -- | -- | -- | -- | -0.0925 | -- | -- | -- | -- | -- |
| 233.37 | 0.715 | 3.45 | -- | 0.398 | -- | -- | -- | -0.0511 | 4.58 | -- | -- | -- | -- |
| 236.69 | 0.717 | 3.46 | -- | -- | -0.496 | -- | -- | -0.0355 | -- | 6 | 4637 | -- | -- |
| 241.83 | 0.726 | 3.46 | -- | -- | -- | -- | -- | -0.0424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.27 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 3 | 207.69 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 4 | 208.83 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 13 |
| 8 | 209.49 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 19 | 209.76 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 20 | 210.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 22 | 210.11 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 35 | 210.58 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 47 | 210.64 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 60 | 211.07 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 91 | 211.70 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 102 | 211.74 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 107 | 211.87 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 109 | 212.02 | wind | 1.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 110 | 212.06 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 112 | 212.19 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 9 |
| 115 | 212.25 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 135 | 212.42 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 4 |
| 143 | 212.65 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 258 | 213.29 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 291 | 213.49 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 307 | 213.65 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 2 |
| 324 | 213.70 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 338 | 213.73 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 347 | 213.85 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 357 | 213.95 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 358 | 213.96 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 367 | 213.98 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 386 | 214.04 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 407 | 214.20 | wind | 1.0 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 441 | 214.46 | wind | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 455 | 214.49 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 465 | 214.56 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 480 | 214.59 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 539 | 214.89 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 542 | 214.90 | wind | 3.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 546 | 214.92 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 6 | 11 |
| 547 | 214.93 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 549 | 214.94 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 564 | 214.94 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 579 | 214.95 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 16 |
| 586 | 215.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 595 | 215.03 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 596 | 215.03 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 599 | 215.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 601 | 215.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 635 | 215.13 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 644 | 215.17 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 645 | 215.18 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 653 | 215.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 665 | 215.25 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 706 | 215.29 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 708 | 215.31 | atmosphere | 1010.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 716 | 215.32 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 740 | 215.37 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 23 | 18 |
| 741 | 215.38 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 759 | 215.40 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 771 | 215.45 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 799 | 215.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 813 | 215.52 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 822 | 215.52 | wind | 7.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 844 | 215.53 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 23 |
| 846 | 215.54 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 848 | 215.55 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 849 | 215.55 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 850 | 215.56 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 858 | 215.57 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 15 |
| 864 | 215.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 877 | 215.59 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 896 | 215.61 | wind | 7.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 906 | 215.63 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 910 | 215.63 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 916 | 215.66 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 12 |
| 922 | 215.67 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 956 | 215.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 958 | 215.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 959 | 215.71 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 963 | 215.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 965 | 215.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 970 | 215.71 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 971 | 215.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 972 | 215.72 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 978 | 215.73 | wind | 7.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 982 | 215.74 | temperature | 30.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 989 | 215.75 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 23 | 21 |
| 996 | 215.77 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |