Os10g0545500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulase (EC 3.2.1.4) (Fragment).
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Os10g0545500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cellulase (EC 3.2.1.4) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 319.08 | 0.839 | 7.97 | 4.6 | 0.63 | 205 | -2.2 | 428 | -0.766 | 14.8 | 15 | 4494 | -- | -- |
| 334.58 | 0.858 | 5.06 | -1.91 | 0.621 | 2 | -2.04 | -- | -0.85 | 15.1 | 15 | 4494 | -- | -- |
| 334.54 | 0.852 | 7.94 | 4.4 | 0.618 | 208 | -- | 433 | -0.804 | 15.6 | 14.97 | 4467 | -- | -- |
| 346.8 | 0.867 | 5.04 | -1.68 | 0.513 | 0.842 | -- | -- | -0.708 | 14.8 | 22.19 | 2801 | -- | -- |
| 356.54 | 0.879 | 7.9 | 4.25 | -- | 222 | -- | 461 | -0.823 | -- | 14.9 | 4431 | -- | -- |
| 342.05 | 0.867 | 5.07 | -2 | 0.605 | -- | -1.83 | -- | -0.871 | 15.3 | -- | -- | -- | -- |
| 352.48 | 0.879 | 5.08 | -2.03 | 0.608 | -- | -- | -- | -0.881 | 15.8 | -- | -- | -- | -- |
| 363.2 | 0.888 | 5.04 | -1.7 | -- | 0.838 | -- | -- | -0.732 | -- | 22 | 2614 | -- | -- |
| 359.95 | 0.884 | 4.93 | -- | 0.597 | 1.66 | -- | -- | -0.251 | 15.9 | 22.2 | 47520 | -- | -- |
| 372.89 | 0.902 | 5.08 | -2.06 | -- | -- | -- | -- | -0.897 | -- | -- | -- | -- | -- |
| 461.25 | 1 | 5.03 | -- | 0.648 | -- | -- | -- | -0.655 | 15.7 | -- | -- | -- | -- |
| 379.2 | 0.907 | 4.93 | -- | -- | 1.69 | -- | -- | -0.256 | -- | 22.3 | 47520 | -- | -- |
| 484.48 | 1.03 | 5.03 | -- | -- | -- | -- | -- | -0.669 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 314.92 | temperature | 15 | 270 | > th | dose independent | rect. | 18 | 6 |
| 2 | 315.82 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 8 | 10 |
| 7 | 316.32 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 13 | 316.90 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 2 |
| 14 | 316.91 | temperature | 15 | 10 | > th | dose independent | rect. | 19 | 7 |
| 21 | 317.28 | humidity | 80 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 25 | 317.35 | wind | 3 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 30 | 317.45 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 36 | 317.54 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 3 |
| 47 | 317.60 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 54 | 317.74 | wind | 3 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 55 | 317.77 | wind | 3 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 125 | 318.27 | wind | 3 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 135 | 318.41 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 162 | 318.65 | wind | 7 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 174 | 318.81 | temperature | 15 | 4320 | < th | dose dependent | sin | 8 | NA |
| 179 | 318.88 | humidity | 80 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 223 | 319.27 | wind | 3 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 229 | 319.32 | temperature | 15 | 30 | > th | dose independent | rect. | 22 | 16 |
| 235 | 319.38 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 4 |
| 241 | 319.42 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 10 | 9 |
| 248 | 319.46 | temperature | 15 | 4320 | < th | dose dependent | rect. | 15 | 16 |
| 259 | 319.51 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 18 |
| 270 | 319.55 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 10 | 1 |
| 289 | 319.62 | humidity | 50 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 292 | 319.63 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 342 | 319.82 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 376 | 320.04 | humidity | 90 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 378 | 320.08 | humidity | 80 | 270 | < th | dose independent | rect. | 14 | 3 |
| 380 | 320.10 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 1 |
| 382 | 320.10 | wind | 1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 403 | 320.21 | atmosphere | 1005 | 270 | < th | dose dependent | sin | 23 | NA |
| 410 | 320.24 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 16 |
| 419 | 320.27 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 438 | 320.33 | temperature | 15 | 4320 | < th | dose dependent | rect. | 15 | 22 |
| 439 | 320.34 | humidity | 90 | 90 | < th | dose independent | rect. | 17 | 1 |
| 456 | 320.39 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 4 |
| 457 | 320.40 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 9 | 3 |
| 481 | 320.44 | humidity | 70 | 270 | < th | dose independent | rect. | 14 | 5 |
| 484 | 320.44 | temperature | 15 | 90 | > th | dose independent | rect. | 2 | 16 |
| 487 | 320.44 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 23 |
| 492 | 320.47 | wind | 1 | 270 | > th | dose independent | rect. | 24 | 18 |
| 493 | 320.47 | humidity | 80 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 496 | 320.48 | humidity | 80 | 270 | < th | dose dependent | rect. | 14 | 13 |
| 505 | 320.50 | radiation | 1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 507 | 320.51 | temperature | 15 | 4320 | < th | dose dependent | no | NA | NA |
| 519 | 320.55 | humidity | 80 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 539 | 320.63 | temperature | 15 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 558 | 320.70 | wind | 3 | 4320 | > th | dose independent | rect. | 17 | 17 |
| 575 | 320.79 | wind | 3 | 4320 | < th | dose independent | rect. | 17 | 17 |
| 585 | 320.84 | temperature | 15 | 10 | > th | dose independent | rect. | 20 | 19 |
| 589 | 320.86 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 602 | 320.88 | radiation | 1 | 270 | > th | dose independent | rect. | 14 | 3 |
| 634 | 320.99 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 644 | 321.03 | radiation | 1 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 658 | 321.09 | wind | 5 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 677 | 321.16 | temperature | 15 | 30 | > th | dose independent | rect. | 18 | 23 |
| 709 | 321.30 | temperature | 15 | 270 | > th | dose independent | rect. | 24 | 18 |
| 732 | 321.35 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 9 | 4 |
| 748 | 321.41 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 6 | 6 |
| 833 | 321.68 | wind | 5 | 4320 | < th | dose dependent | rect. | 21 | 13 |
| 848 | 321.75 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 8 | 10 |
| 849 | 321.75 | temperature | 15 | 10 | > th | dose independent | rect. | 19 | 21 |
| 874 | 321.84 | temperature | 15 | 10 | > th | dose independent | rect. | 9 | 17 |
| 886 | 321.88 | radiation | 1 | 270 | > th | dose independent | rect. | 14 | 15 |
| 923 | 321.98 | wind | 1 | 270 | > th | dose independent | rect. | 23 | 20 |
| 929 | 322.01 | radiation | 1 | 270 | > th | dose independent | rect. | 14 | 5 |
| 946 | 322.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 956 | 322.14 | wind | 1 | 270 | > th | dose independent | rect. | 14 | 15 |
| 984 | 322.26 | temperature | 15 | 10 | > th | dose independent | rect. | 22 | 4 |