Os10g0117000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 16 domain containing protein.
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Os10g0117000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 16 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.99 | 0.55 | 6.08 | -0.602 | 0.531 | 5.05 | -0.404 | -2.11 | -0.156 | 0.443 | 8.629 | 238 | -- | -- |
| 139.82 | 0.551 | 6.04 | -0.277 | 0.562 | 5.03 | -0.119 | -- | -0.0696 | 0.469 | 6.329 | 229 | -- | -- |
| 137.6 | 0.546 | 6.07 | -0.543 | 0.554 | 5.07 | -- | -1.79 | -0.144 | 0.509 | 8.564 | 232 | -- | -- |
| 139.88 | 0.551 | 6.04 | -0.275 | 0.564 | 5.04 | -- | -- | -0.0713 | 0.532 | 6.117 | 229 | -- | -- |
| 140.06 | 0.551 | 6.07 | -0.577 | -- | 4.8 | -- | -2.06 | -0.146 | -- | 8.613 | 415 | -- | -- |
| 402.39 | 0.94 | 5.9 | 0.803 | 1.24 | -- | 0.268 | -- | 0.638 | 17.9 | -- | -- | -- | -- |
| 402.56 | 0.94 | 5.9 | 0.801 | 1.24 | -- | -- | -- | 0.639 | 17.9 | -- | -- | -- | -- |
| 143.01 | 0.557 | 6.03 | -0.238 | -- | 4.74 | -- | -- | -0.0535 | -- | 9.461 | 408 | -- | -- |
| 141.66 | 0.554 | 6.03 | -- | 0.541 | 4.9 | -- | -- | -0.0252 | 0.278 | 6.314 | 229 | -- | -- |
| 482.09 | 1.03 | 5.88 | 0.763 | -- | -- | -- | -- | 0.61 | -- | -- | -- | -- | -- |
| 419.45 | 0.958 | 5.92 | -- | 1.23 | -- | -- | -- | 0.549 | 17.9 | -- | -- | -- | -- |
| 144.4 | 0.56 | 6.02 | -- | -- | 4.66 | -- | -- | -0.0175 | -- | 7.959 | 405 | -- | -- |
| 497.45 | 1.04 | 5.9 | -- | -- | -- | -- | -- | 0.525 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.45 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 3 | 137.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 4 | 138.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 5 | 138.55 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 6 | 138.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 13 | 140.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 17 | 140.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 34 | 142.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 36 | 142.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 44 | 143.09 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 51 | 143.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 59 | 143.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 62 | 144.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 79 | 144.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 80 | 144.68 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 92 | 145.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 96 | 145.30 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 132 | 145.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 145 | 146.12 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 183 | 146.70 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 229 | 147.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 326 | 148.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 364 | 149.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 387 | 149.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |