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Os03g0854600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Concanavalin A-like lectin/glucanase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.07 (0.0292) R2 : 0.483
β1 : -0.879 (0.107) R2dD : 0.0794 R2D : 0.0815
β2 : 1.01 (0.0696) R2dC : 0.241 R2C : 0.205
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.642 (0.0624) R2dN8 : 0.161 R2N8 : 0.168
σ : 0.549
deviance : 137.6
__
_____
C
peak time of C : 0.883
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
115.93 0.506 8.11 -0.874 1.02 -0.418 0.965 -2.85 0.579 0.895 1004 4412 -- --
125.57 0.522 8.09 -0.781 1.01 -0.627 0.908 -- 0.566 0.912 1003 4449 -- --
119.22 0.509 8.11 -0.934 1.02 -0.43 -- -3.15 0.585 0.884 1004 4991 -- --
125.28 0.521 8.09 -0.732 0.997 -0.706 -- -- 0.564 0.841 1000 12581 -- --
183.48 0.631 8.1 -0.901 -- -0.506 -- -2.85 0.594 -- 1004 5001 -- --
134.31 0.543 8.07 -0.846 1.02 -- 0.884 -- 0.646 0.899 -- -- -- --
137.6 0.549 8.07 -0.879 1.01 -- -- -- 0.642 0.883 -- -- -- --
187.47 0.638 8.08 -0.679 -- -0.762 -- -- 0.567 -- 1001 12894 -- --
138.27 0.548 8.08 -- 0.987 -0.849 -- -- 0.625 0.889 999.6 12735 -- --
201.74 0.664 8.05 -0.841 -- -- -- -- 0.661 -- -- -- -- --
157.95 0.588 8.05 -- 1 -- -- -- 0.739 0.844 -- -- -- --
198.84 0.657 8.06 -- -- -0.911 -- -- 0.631 -- 999.7 12770 -- --
220.41 0.693 8.03 -- -- -- -- -- 0.754 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.88 atmosphere 1000.0 90 > th dose independent rect. 3 16
2 106.44 temperature 15.0 270 > th dose dependent rect. 15 3
4 106.77 temperature 20.0 90 > th dose independent rect. 3 16
5 106.86 temperature 10.0 270 > th dose dependent rect. 14 5
13 107.87 atmosphere 1000.0 10 > th dose independent rect. 4 16
16 108.01 radiation 1.0 270 > th dose independent rect. 15 14
17 108.03 radiation 1.0 270 > th dose independent rect. 15 4
28 108.36 temperature 15.0 10 > th dose dependent rect. 16 4
29 108.40 humidity 90.0 90 < th dose independent rect. 16 3
36 108.59 temperature 10.0 270 > th dose dependent rect. 14 17
39 108.67 temperature 20.0 90 > th dose independent rect. 16 3
44 108.85 temperature 10.0 270 > th dose dependent rect. 14 15
50 108.96 precipitation 0.1 90 < th dose independent rect. 16 3
51 108.96 precipitation 0.1 90 < th dose dependent rect. 16 3
54 109.08 wind 3.0 270 > th dose independent rect. 15 2
56 109.08 atmosphere 995.0 90 > th dose dependent rect. 16 3
58 109.10 temperature 20.0 10 > th dose independent rect. 16 4
60 109.13 atmosphere 995.0 90 > th dose dependent rect. 3 16
67 109.33 temperature 25.0 270 > th dose independent rect. 14 5
73 109.40 humidity 90.0 270 < th dose independent rect. 14 5
75 109.43 radiation 40.0 90 < th dose dependent rect. 3 16
80 109.61 atmosphere 1000.0 90 > th dose independent rect. 16 3
87 109.76 radiation 1.0 270 > th dose dependent rect. 16 1
89 109.78 humidity 90.0 270 < th dose dependent rect. 15 3
90 109.80 radiation 40.0 90 < th dose dependent rect. 16 3
91 109.81 humidity 50.0 270 > th dose independent rect. 17 22
92 109.82 temperature 10.0 90 > th dose independent rect. 16 3
94 109.82 atmosphere 1010.0 90 < th dose independent rect. 16 3
96 109.82 radiation 30.0 90 < th dose independent rect. 16 3
99 109.82 temperature 10.0 90 > th dose independent rect. 19 21
113 109.84 temperature 20.0 10 > th dose independent rect. 3 17
122 109.96 precipitation 0.1 270 < th dose independent rect. 14 5
123 109.96 precipitation 0.1 270 < th dose dependent rect. 14 5
126 110.04 precipitation 0.1 90 < th dose independent rect. 19 21
127 110.04 precipitation 0.1 90 < th dose dependent rect. 19 21
130 110.08 radiation 1.0 270 > th dose dependent rect. 15 3
131 110.10 radiation 1.0 270 > th dose dependent rect. 15 14
152 110.22 humidity 80.0 10 < th dose independent rect. 16 4
153 110.22 wind 9.0 90 < th dose independent rect. 19 21
158 110.31 wind 9.0 90 < th dose independent rect. 16 3
176 110.38 humidity 50.0 90 > th dose independent rect. 19 21
184 110.44 wind 1.0 270 > th dose independent rect. 14 5
200 110.51 temperature 10.0 270 > th dose independent rect. 17 22
205 110.58 humidity 50.0 270 > th dose independent rect. 19 19
207 110.59 precipitation 0.1 270 < th dose independent rect. 19 19
208 110.59 precipitation 0.1 270 < th dose dependent rect. 19 19
210 110.62 temperature 10.0 270 > th dose dependent rect. 5 9
216 110.63 humidity 70.0 90 > th dose independent rect. 19 8
217 110.63 radiation 40.0 90 < th dose independent rect. 3 16
236 110.75 wind 9.0 270 < th dose independent rect. 17 22
238 110.79 radiation 10.0 10 < th dose dependent rect. 4 16
242 110.82 temperature 10.0 270 > th dose independent rect. 14 5
244 110.82 atmosphere 1010.0 270 < th dose independent rect. 14 5
247 110.82 temperature 10.0 270 > th dose independent rect. 19 19
248 110.82 atmosphere 995.0 270 > th dose independent rect. 19 19
249 110.83 humidity 90.0 270 < th dose independent rect. 3 11
266 110.87 humidity 90.0 90 < th dose dependent rect. 17 2
270 110.91 wind 9.0 270 < th dose independent rect. 19 19
301 111.09 precipitation 0.1 10 < th dose independent rect. 16 4
302 111.09 precipitation 0.1 10 < th dose dependent rect. 16 4
303 111.10 radiation 20.0 90 < th dose independent rect. 3 16
304 111.11 wind 1.0 270 > th dose dependent rect. 15 2
322 111.29 wind 9.0 270 < th dose independent rect. 14 5
325 111.31 humidity 50.0 10 > th dose independent rect. 20 20
326 111.31 atmosphere 995.0 270 > th dose independent rect. 18 21
349 111.55 radiation 20.0 10 < th dose independent rect. 16 4
353 111.58 radiation 40.0 10 < th dose dependent rect. 16 4
358 111.61 humidity 80.0 90 < th dose independent rect. 21 19
363 111.64 temperature 10.0 10 > th dose independent rect. 16 4
365 111.64 atmosphere 1010.0 10 < th dose independent rect. 16 4
367 111.64 radiation 40.0 10 < th dose independent rect. 16 4
370 111.64 temperature 10.0 10 > th dose independent rect. 20 20
377 111.68 wind 1.0 10 > th dose independent rect. 16 4
386 111.73 precipitation 0.1 10 < th dose independent rect. 20 20
388 111.73 precipitation 0.1 10 < th dose dependent rect. 20 20
394 111.77 wind 5.0 4320 > th dose dependent rect. 14 14
402 111.82 precipitation 0.1 90 < th dose independent rect. 3 16
406 111.82 precipitation 0.1 90 < th dose dependent rect. 3 16
407 111.83 atmosphere 995.0 10 > th dose independent rect. 16 4
450 112.16 atmosphere 995.0 10 > th dose dependent rect. 16 4
451 112.17 wind 9.0 10 < th dose independent rect. 20 20
460 112.26 humidity 50.0 90 > th dose independent rect. 17 2
467 112.28 temperature 10.0 1440 > th dose independent rect. 17 3
470 112.28 radiation 30.0 1440 < th dose independent rect. 17 3
476 112.28 wind 9.0 10 < th dose independent rect. 16 4
478 112.28 temperature 10.0 1440 > th dose independent rect. 20 21
482 112.29 temperature 10.0 90 > th dose independent rect. 19 8
483 112.29 temperature 30.0 90 < th dose independent rect. 19 8
484 112.29 humidity 50.0 90 > th dose independent rect. 19 8
486 112.29 atmosphere 995.0 90 > th dose independent rect. 19 8
487 112.29 radiation 1.0 90 < th dose independent rect. 19 8
493 112.29 atmosphere 1015.0 90 < th dose independent rect. 3 16
494 112.29 radiation 1.0 90 < th dose dependent rect. 19 8
500 112.30 humidity 80.0 270 < th dose independent rect. 21 17
502 112.32 radiation 20.0 10 < th dose dependent rect. 12 8
506 112.35 radiation 1.0 270 > th dose independent sin 14 NA
525 112.38 wind 9.0 90 < th dose independent rect. 19 8
539 112.44 radiation 1.0 270 < th dose dependent sin 14 NA
545 112.45 humidity 70.0 270 < th dose independent rect. 15 16
546 112.46 wind 1.0 90 > th dose dependent rect. 17 2
559 112.50 radiation 1.0 270 < th dose independent sin 14 NA
560 112.51 wind 9.0 90 < th dose dependent rect. 16 3
570 112.55 temperature 20.0 270 > th dose dependent rect. 9 4
613 112.71 precipitation 0.1 90 < th dose independent rect. 19 8
616 112.71 precipitation 0.1 90 < th dose dependent rect. 19 8
650 112.87 temperature 30.0 720 < th dose independent rect. 17 14
655 112.88 radiation 30.0 10 < th dose dependent rect. 16 17
656 112.89 humidity 50.0 10 > th dose independent rect. 16 4
662 112.92 wind 5.0 4320 > th dose dependent sin 14 NA
664 112.93 radiation 10.0 10 < th dose independent rect. 4 16
700 113.00 radiation 10.0 10 < th dose dependent rect. 6 14
705 113.02 radiation 20.0 10 < th dose dependent rect. 8 12
723 113.04 atmosphere 995.0 10 > th dose independent rect. 20 20
725 113.05 wind 9.0 90 < th dose independent rect. 3 16
790 113.24 temperature 20.0 270 > th dose independent rect. 14 19
808 113.33 humidity 60.0 720 > th dose independent rect. 17 14
810 113.33 wind 1.0 270 > th dose dependent rect. 14 5
819 113.37 radiation 10.0 10 < th dose independent rect. 12 8
829 113.40 radiation 40.0 90 < th dose dependent rect. 11 8
843 113.46 temperature 20.0 10 > th dose dependent rect. 9 7
845 113.48 humidity 70.0 720 < th dose dependent rect. 17 2
887 113.61 wind 7.0 4320 < th dose independent rect. 15 10
891 113.62 wind 7.0 4320 < th dose independent rect. 15 12
909 113.68 radiation 10.0 10 < th dose dependent sin 23 NA
910 113.68 temperature 20.0 90 > th dose dependent rect. 9 7
913 113.69 humidity 70.0 720 < th dose dependent rect. 17 15
964 113.81 humidity 50.0 270 > th dose dependent rect. 24 10
966 113.82 atmosphere 1015.0 90 < th dose independent rect. 19 21
968 113.83 humidity 80.0 270 > th dose independent rect. 24 11
982 113.88 temperature 10.0 10 > th dose dependent rect. 9 7
990 113.90 atmosphere 1015.0 270 < th dose independent rect. 19 19