Os09g0395600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os09g0395600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.27 | 0.333 | 2.98 | -0.0101 | 0.111 | 0.617 | -0.0307 | -3.11 | 0.0843 | 5.6 | 0.5002 | 29 | -- | -- |
| 52.37 | 0.337 | 2.97 | 0.0456 | 0.121 | 0.336 | -0.109 | -- | 0.089 | 4.82 | 0.4982 | 28 | -- | -- |
| 50.28 | 0.33 | 2.98 | -0.0104 | 0.11 | 0.618 | -- | -3.12 | 0.0844 | 5.53 | 0.5 | 28 | -- | -- |
| 52.23 | 0.337 | 2.97 | 0.0461 | 0.125 | 0.368 | -- | -- | 0.0872 | 5.11 | 0.695 | 20 | -- | -- |
| 50.87 | 0.332 | 2.98 | -0.0101 | -- | 0.691 | -- | -3.13 | 0.0896 | -- | 0.5004 | 28 | -- | -- |
| 53.14 | 0.342 | 2.97 | 0.0554 | 0.16 | -- | -0.084 | -- | 0.0759 | 5.49 | -- | -- | -- | -- |
| 53.16 | 0.341 | 2.97 | 0.0551 | 0.159 | -- | -- | -- | 0.0762 | 5.49 | -- | -- | -- | -- |
| 52.97 | 0.339 | 2.97 | 0.0356 | -- | 0.386 | -- | -- | 0.089 | -- | 0.955 | 20 | -- | -- |
| 52.23 | 0.337 | 2.97 | -- | 0.126 | 0.369 | -- | -- | 0.0807 | 5.9 | 0.7 | 20 | -- | -- |
| 54.47 | 0.345 | 2.97 | 0.0604 | -- | -- | -- | -- | 0.0801 | -- | -- | -- | -- | -- |
| 53.24 | 0.341 | 2.97 | -- | 0.16 | -- | -- | -- | 0.0701 | 5.48 | -- | -- | -- | -- |
| 52.96 | 0.339 | 2.97 | -- | -- | 0.457 | -- | -- | 0.084 | -- | 0.5 | 20 | -- | -- |
| 54.57 | 0.345 | 2.97 | -- | -- | -- | -- | -- | 0.0734 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.41 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 39.52 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 14 | 40.12 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 21 | 41.00 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 32 | 42.11 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 5 |
| 39 | 42.69 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 8 |
| 62 | 44.61 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 13 |
| 80 | 45.41 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 102 | 46.06 | temperature | 20 | 90 | < th | dose dependent | rect. | 6 | 4 |
| 104 | 46.11 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 3 |
| 106 | 46.12 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 2 |
| 117 | 46.12 | temperature | 20 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 128 | 46.17 | wind | 5 | 10 | > th | dose independent | rect. | 8 | 1 |
| 135 | 46.17 | wind | 5 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 265 | 46.64 | wind | 1 | 30 | < th | dose dependent | sin | 2 | NA |
| 273 | 46.79 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 8 |
| 300 | 47.37 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 5 |
| 309 | 47.49 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 336 | 47.92 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 341 | 47.96 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 347 | 48.02 | wind | 3 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 377 | 48.41 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 22 |
| 394 | 48.51 | wind | 1 | 30 | < th | dose independent | sin | 2 | NA |
| 411 | 48.61 | humidity | 80 | 270 | < th | dose independent | rect. | 4 | 3 |
| 412 | 48.62 | humidity | 80 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 434 | 48.97 | wind | 5 | 10 | > th | dose independent | rect. | 1 | 8 |
| 481 | 49.26 | wind | 3 | 90 | > th | dose independent | rect. | 6 | 1 |
| 491 | 49.44 | wind | 5 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 498 | 49.47 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 510 | 49.53 | wind | 1 | 30 | > th | dose independent | sin | 2 | NA |
| 515 | 49.55 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 16 |
| 665 | 50.33 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 725 | 50.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 753 | 50.62 | radiation | 10 | 10 | < th | dose independent | rect. | 8 | 1 |
| 769 | 50.64 | wind | 1 | 30 | < th | dose dependent | rect. | 9 | 22 |
| 815 | 50.74 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 7 |
| 949 | 50.82 | wind | 1 | 30 | < th | dose dependent | no | NA | NA |
| 953 | 50.82 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 977 | 50.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 2 |