BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0549400 Os01g0549400|AK122104
(792 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0549400 Similar to RNA helicase-like protein DB10 792 0.0
Os01g0172200 WW/Rsp5/WWP domain containing protein 608 e-174
Os11g0689400 WW/Rsp5/WWP domain containing protein 600 e-171
AK107287 405 e-113
AK111212 400 e-111
Os07g0301200 Similar to RNA helicase (Fragment) 313 4e-85
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 310 4e-84
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 302 6e-82
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 293 2e-79
Os03g0805200 Similar to RNA helicase (Fragment) 293 2e-79
AK110107 293 3e-79
Os11g0599500 Similar to RNA helicase (Fragment) 287 2e-77
AK119751 287 2e-77
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 283 3e-76
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 265 8e-71
Os02g0150100 Similar to DEAD-box protein abstrakt 244 1e-64
Os03g0827700 Similar to ATP-dependent RNA helicase 216 7e-56
Os01g0618500 Similar to RNA helicase (Fragment) 197 2e-50
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 194 2e-49
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 193 4e-49
Os09g0520700 Similar to RNA helicase 192 9e-49
Os01g0618400 Similar to RNA helicase (Fragment) 189 9e-48
Os04g0533000 Similar to RNA helicase (Fragment) 187 3e-47
Os03g0669000 Similar to RNA helicase (Fragment) 186 5e-47
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 184 2e-46
Os02g0641800 Similar to RNA helicase (Fragment) 184 3e-46
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 184 3e-46
AK068197 181 2e-45
Os10g0503700 Similar to RNA helicase (Fragment) 177 2e-44
Os07g0660000 177 2e-44
Os01g0549700 Similar to RNA helicase (Fragment) 175 1e-43
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 174 2e-43
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 174 2e-43
Os12g0481100 Similar to RNA helicase 173 4e-43
Os02g0826100 Similar to RNA helicase (Fragment) 171 2e-42
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 169 1e-41
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 167 4e-41
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 164 2e-40
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 162 1e-39
Os06g0697200 DEAD/DEAH box helicase domain containing protein 156 5e-38
Os05g0110500 Similar to RNA helicase (Fragment) 142 7e-34
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 142 1e-33
Os04g0510400 Similar to RNA helicase (Fragment) 141 2e-33
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 140 4e-33
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 125 8e-29
Os03g0728800 Similar to RNA helicase (Fragment) 124 3e-28
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 118 2e-26
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 114 2e-25
Os06g0535100 Similar to Helicase pitchoune (Fragment) 112 2e-24
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 94 4e-19
Os07g0517000 DEAD/DEAH box helicase domain containing protein 80 5e-15
Os02g0201900 DEAD/DEAH box helicase domain containing protein 77 6e-14
Os01g0197200 Similar to Ethylene-responsive RNA helicase 76 1e-13
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/426 (92%), Positives = 393/426 (92%)
Query: 129 TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ
Sbjct: 129 TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
Query: 189 DVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRS 248
DVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRS
Sbjct: 189 DVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRS 248
Query: 249 SRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRM 308
SRISSTCLYGGAPKGPQ ATPGRLNDILEMRRISLKQVSYLVLDEADRM
Sbjct: 249 SRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRM 308
Query: 309 LDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSA 368
LDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSA
Sbjct: 309 LDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSA 368
Query: 369 ITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDK 428
ITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDK
Sbjct: 369 ITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDK 428
Query: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXX 488
SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI
Sbjct: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRA 488
Query: 489 XXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASXXXXXXXXXXXWATRSDRG 548
VAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMAS WATRSDRG
Sbjct: 489 GATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRG 548
Query: 549 GSHSEL 554
GSHSEL
Sbjct: 549 GSHSEL 554
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/140 (87%), Positives = 123/140 (87%)
Query: 653 HERSATGSGSALPDSGHGERKRTPEADPSRNHTNHSDPKDDRHPEDGKVGKVDLDRSPTP 712
HERSATGSGSALPDSGHGERKRTPEADPSRNHTNHSDPKDDRHPEDGKVGKVDLDRSPTP
Sbjct: 653 HERSATGSGSALPDSGHGERKRTPEADPSRNHTNHSDPKDDRHPEDGKVGKVDLDRSPTP 712
Query: 713 QDKSGPYSPAYNGKTSRSVSPGNQVEGNNKAAEVSKNPDPSSPPHHGKTRXXXXXXXXXX 772
QDKSGPYSPAYNGKTSRSVSPGNQVEGNNKAAEVSKNPDPSSPPHHGKTR
Sbjct: 713 QDKSGPYSPAYNGKTSRSVSPGNQVEGNNKAAEVSKNPDPSSPPHHGKTREDEEEGMIDE 772
Query: 773 XXXXXXXPRANATVQNGGDN 792
PRANATVQNGGDN
Sbjct: 773 DGEIADDPRANATVQNGGDN 792
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 36/48 (75%)
Query: 1 MSAGTXXXXXXXXXXXXSLPKPWRGLVDGTTGYLYYWNPETNITQYEK 48
MSAGT SLPKPWRGLVDGTTGYLYYWNPETNITQYEK
Sbjct: 1 MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEK 48
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 608 bits (1569), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/449 (66%), Positives = 343/449 (76%), Gaps = 51/449 (11%)
Query: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEI------------------------ 165
EAYR +HEIT+VG+ PAP +F++ GFPPEIL+E+
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVSAHNLHDYLMHFLVSFSKEIRRSL 219
Query: 166 ---------------------------QRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGS 198
Q+AGFS+PTPIQAQSWPIAL+ +D+VA+AKTGS
Sbjct: 220 CVHTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGS 279
Query: 199 GKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYG 258
GKTLGYL+PGF+ +KRLQ+N R GPTVLVL+PTRELATQI +EA KFGRSSRISS CLYG
Sbjct: 280 GKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYG 339
Query: 259 GAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIR 318
GAPKGPQ ATPGRLNDILEMRR+SL QVSYLVLDEADRMLDMGFEPQIR
Sbjct: 340 GAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIR 399
Query: 319 KIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITP 378
KIVK++ P+RQTLM+TATWPKEVR+IA DLL +PVQV IG+ D+LVAN +ITQ V++ITP
Sbjct: 400 KIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITP 459
Query: 379 SEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLS 438
EK RRL+QILRSQ+ GSK++IFC+TKRMCDQLAR L RQ+GASAIHGDKSQ+ER+ VLS
Sbjct: 460 PEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLS 519
Query: 439 HFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFF 498
FRSGR PILVATDVAARGLDIKDIRVV+NYDFPTG+EDYVHRI VAYTFF
Sbjct: 520 EFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFF 579
Query: 499 CDQDSKYAADLIKILEGANQRVPRDLADM 527
CDQDSKYA+DL+KILEGANQ V + L DM
Sbjct: 580 CDQDSKYASDLVKILEGANQSVSQQLRDM 608
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/399 (71%), Positives = 329/399 (82%)
Query: 129 TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
+AYR HE+T VG+NVP P +FE GFPPEIL+EI AGF +PTPIQAQ+WP+ALQ +
Sbjct: 583 ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNR 642
Query: 189 DVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRS 248
D+VAIAKTGSGKTLGYL+P F+H++R QNNP GPTVLVLAPTRELA+QI +EAVKFGRS
Sbjct: 643 DIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKFGRS 702
Query: 249 SRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRM 308
SR+S TCLYGG KG Q ATPGRLNDILEMR+ISL QVS+LVLDEADRM
Sbjct: 703 SRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADRM 762
Query: 309 LDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSA 368
LDMGFEPQIRKIV EIP RQTLMYTATWPKEV +IA DLL PVQV IGS+DELVAN +
Sbjct: 763 LDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKS 822
Query: 369 ITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDK 428
ITQ VE++ P +K RRLEQILR+Q+ GSKV+IFC+TK+MCDQLAR + R FGA++IHGDK
Sbjct: 823 ITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDK 882
Query: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXX 488
SQ+ER+ VL+ FR+GR+PILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI
Sbjct: 883 SQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRA 942
Query: 489 XXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADM 527
V+YTFF +QD KYA DL+K+LEGANQ VP +L +M
Sbjct: 943 GATGVSYTFFSEQDWKYAGDLVKVLEGANQHVPPELQEM 981
>AK107287
Length = 554
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/403 (52%), Positives = 279/403 (69%), Gaps = 12/403 (2%)
Query: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVV 191
YR ++T+ G NVP P+TSF+ GFP IL EI++ GF+ P+ IQ+Q+WP+AL +D+V
Sbjct: 115 YRASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMGFAEPSAIQSQAWPMALSGRDLV 174
Query: 192 AIAKTGSGKTLGYLLPGFMHIK-RLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSR 250
AIA+TGSGKT+G+ LP +HI + P GP L+LAPTRELA QI E +FG SSR
Sbjct: 175 AIAETGSGKTIGFALPAMVHINAQPLLKPGDGPIALILAPTRELANQIQVECNRFGGSSR 234
Query: 251 ISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD 310
+ + +YGG PKGPQ ATPGRL D+++ + +L++V+YLV+DEADRMLD
Sbjct: 235 LRTCAVYGGVPKGPQTRDLQRGAEIVIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLD 294
Query: 311 MGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAIT 370
MGFEPQIRKI+++I P RQTLM++ATWPKEV+R+A D L QV IGS EL AN +
Sbjct: 295 MGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNDFAQVNIGST-ELAANHNVK 353
Query: 371 QNVELITPSEK----LRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFG--ASAI 424
Q +E+ + EK + LE I SQ++G KV+IF +TKR+ D L + L RQ G A AI
Sbjct: 354 QIIEVCSEFEKKGKLIGHLETI--SQENG-KVIIFTSTKRVADDLTKYL-RQDGWPALAI 409
Query: 425 HGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXX 484
HGDK Q ER+ VL+ F+SGRSPI+VAT VA+RGLD+KDI VINYDFPT EDYVH+I
Sbjct: 410 HGDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGR 469
Query: 485 XXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADM 527
AYTFF ++SK A +L+ IL A Q +PR++ +M
Sbjct: 470 TGRAGRTGTAYTFFTPENSKSARELVGILREAKQEIPREIEEM 512
>AK111212
Length = 545
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/406 (51%), Positives = 277/406 (68%), Gaps = 11/406 (2%)
Query: 129 TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
EA+R +H++T+ G VP P+ +F+ GFP ++ E++ GF +PT IQ+Q WP+AL +
Sbjct: 116 VEAFRRKHQMTIAGTEVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGR 175
Query: 189 DVVAIAKTGSGKTLGYLLPGFMHIK-RLQNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
DVV IA+TGSGKTL Y LP +HI + P GP VLVLAPTRELA QI EE KFGR
Sbjct: 176 DVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGR 235
Query: 248 SSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADR 307
SSRI +TC+YGG PKGPQ ATPGRL D+LE + +L++V+YLVLDEADR
Sbjct: 236 SSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADR 295
Query: 308 MLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANS 367
MLDMGFEPQIRKI+ +I P RQTL ++A WPKEVR +A D L +QV IGS+ EL AN
Sbjct: 296 MLDMGFEPQIRKIIGQIRPDRQTLTWSAAWPKEVRALASDFLNDFIQVNIGSM-ELAANH 354
Query: 368 AITQNVELITPSEK----LRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFG--A 421
ITQ VE++T EK ++ LE+ + +++ +K+LIF TKR+ D++ R L RQ G A
Sbjct: 355 RITQIVEVVTDMEKRDRMIKHLEKTMENKE--NKILIFVGTKRIADEITRFL-RQDGWPA 411
Query: 422 SAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHR 481
+IHGDK Q+ER+ VL F++G+SPI+VATDVA+RG+D+++I V+NYD+P EDY+HR
Sbjct: 412 LSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPHNSEDYIHR 471
Query: 482 IXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADM 527
I A T F + K A DL+ +L A Q++ L +M
Sbjct: 472 IGRTGRAGAKGTAITLFTTDNQKQARDLVNVLTEAKQQIDPRLVEM 517
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 313 bits (802), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 234/382 (61%), Gaps = 10/382 (2%)
Query: 147 APITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLL 206
AP++SF PP++L + GF P+PIQA +WP L +D + IA TGSGKT+ + +
Sbjct: 91 APLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGV 148
Query: 207 PGFMHIKRL--QNNPRSG-PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKG 263
P MH++R + + + G P VLVL+PTRELA QI + + G ISS CLYGG KG
Sbjct: 149 PALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKG 208
Query: 264 PQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKE 323
PQ TPGR+ D++EM L VS++VLDEADRMLDMGFEP++R I+ +
Sbjct: 209 PQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQ 268
Query: 324 IPPRRQTLMYTATWPKEVRRIAEDLLV-HPVQVTIGSVDELVANSAITQNVELITPSEKL 382
RQT+M++ATWP V ++A++ + +P++V IGS D L AN + Q VE++ +
Sbjct: 269 TASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSED-LAANHDVMQIVEVLDDRSRD 327
Query: 383 RRLEQILRSQDSG--SKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSH 439
RL +L ++VL+F KR ++ L R+ + A ++HGDK+Q +R K LS
Sbjct: 328 SRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSL 387
Query: 440 FRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFC 499
F+ G P+++ATDVA+RGLDI D+ VVINY +P EDYVHRI VA+TFF
Sbjct: 388 FKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFT 447
Query: 500 DQDSKYAADLIKILEGANQRVP 521
++ A +L+ +L A Q VP
Sbjct: 448 QENKGLAGELVNVLREAGQVVP 469
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 310 bits (793), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 246/425 (57%), Gaps = 7/425 (1%)
Query: 131 AYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDV 190
AYR + E+ V G +VP PI ++ G ++L I++ GF P IQAQ+ PI + +D
Sbjct: 405 AYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDC 464
Query: 191 VAIAKTGSGKTLGYLLPGFMHIK-RLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSS 249
+ IAKTGSGKTL ++LP H+K + P GP L++APTREL QI + KF ++
Sbjct: 465 IGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKAL 524
Query: 250 RISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDIL---EMRRISLKQVSYLVLDEAD 306
I+ +YGG+ Q TPGR+ DIL + +L++V++LV+DEAD
Sbjct: 525 GINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEAD 584
Query: 307 RMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVAN 366
RM DMGFEPQI +IV+ P RQT++++AT+P++V +A +L PV++ +G V N
Sbjct: 585 RMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGG--RSVVN 642
Query: 367 SAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIH 425
ITQ VE+ +E+ RL ++L K+L+F ++ CD L + L + + ++H
Sbjct: 643 KDITQLVEVRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLH 702
Query: 426 GDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXX 485
G K Q++RE L+ F+S +L+AT VAARGLD+K++ +V+NYD P EDYVHR+
Sbjct: 703 GGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRT 762
Query: 486 XXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASXXXXXXXXXXXWATRS 545
A TF +++ +YA DL+K LE + Q VP DL +A A +
Sbjct: 763 GRAGRKGFAVTFISEEEERYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQAHGT 822
Query: 546 DRGGS 550
GGS
Sbjct: 823 GYGGS 827
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 302 bits (774), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 235/401 (58%), Gaps = 6/401 (1%)
Query: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVV 191
Y I V G +VP PI SF GFP +++ I + G+ PT IQ Q+ PI L +D++
Sbjct: 201 YMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 260
Query: 192 AIAKTGSGKTLGYLLPGFMHI-KRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSR 250
IAKTGSGKT ++LP +HI + + GP +V APTRELA QI EA KF +
Sbjct: 261 GIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYN 320
Query: 251 ISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD 310
+ +YGG K Q ATPGRL D+L+M+ + + + +YLVLDEADRM D
Sbjct: 321 LRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFD 380
Query: 311 MGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAIT 370
+GFEPQIR IV +I P RQTL+++AT P +V R+A ++L P++VT+G V AN I
Sbjct: 381 LGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGS--ANEDIK 438
Query: 371 QNVELI-TPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLT-RQFGASAIHGDK 428
Q V ++ + +EK+ L + L VL+F K D++ L R F +A+HGDK
Sbjct: 439 QVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDK 498
Query: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI-XXXXX 487
Q+ R + L F+SG +LVATDVAARGLDIK I+ V+N+D ++ ++HRI
Sbjct: 499 DQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRA 558
Query: 488 XXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMA 528
AYT ++ ++A +L+ L A Q VP +L D+A
Sbjct: 559 GDKDGTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLA 599
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 237/409 (57%), Gaps = 19/409 (4%)
Query: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
+ G +VP P +F + + I+R + PTP+Q + PI++ +D++A A+TG
Sbjct: 157 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 216
Query: 198 SGKTLGYLLPGFMHIKRLQNNPRSG------PTVLVLAPTRELATQILEEAVKFGRSSRI 251
SGKT + P I R + PRS P L+L+PTREL+ QI EEA KF + +
Sbjct: 217 SGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGV 276
Query: 252 SSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDM 311
YGGAP Q ATPGRL D+LE R+SL+ + YL LDEADRMLDM
Sbjct: 277 KVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDM 336
Query: 312 GFEPQIRKIVKE--IPPR--RQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANS 367
GFEPQIRKIV++ +PPR RQT++++AT+PKE++R+A D L + + +G V +
Sbjct: 337 GFEPQIRKIVEQMDMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGS--STD 394
Query: 368 AITQNVELITPSEKLRRLEQILRSQDSG------SKVLIFCTTKRMCDQLARTLTRQ-FG 420
I Q VE + ++K L +L +Q + + L+F TKR D L L F
Sbjct: 395 LIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFP 454
Query: 421 ASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVH 480
A++IHGD++Q ERE L F+SG +PILVATDVAARGLDI + VIN+D P I+DYVH
Sbjct: 455 ATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVH 514
Query: 481 RIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMAS 529
RI +A FF + ++ A L ++++ ANQ VP+ L A+
Sbjct: 515 RIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLERYAA 563
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 235/405 (58%), Gaps = 21/405 (5%)
Query: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
+ G +VP P+ +F + + I+R + PTP+Q + PI++ +D++A A+TG
Sbjct: 162 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 221
Query: 198 SGKTLGYLLP---GFMHIKRLQNNPRSG----PTVLVLAPTRELATQILEEAVKFGRSSR 250
SGKT + P G M R PR P L+L+PTREL+ QI EEA KF +
Sbjct: 222 SGKTAAFCFPIISGIMS-SRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTG 280
Query: 251 ISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD 310
+ YGGAP Q ATPGRL D+LE R+SL+ V YL LDEADRMLD
Sbjct: 281 VRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLD 340
Query: 311 MGFEPQIRKIVKE--IPPR--RQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVAN 366
MGFEPQIRKIV++ +PPR RQT++++AT+PKE++R+A D L + + +G V +
Sbjct: 341 MGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGS--ST 398
Query: 367 SAITQNVELITPSEKLRRLEQILRSQDSG------SKVLIFCTTKRMCDQLARTL-TRQF 419
I Q VE + ++K L +L +Q + + L+F TKR D L L T F
Sbjct: 399 DLIAQRVEFVLEADKRSYLMDLLHAQKANGTHGKQALTLVFVETKRGADALENWLYTNGF 458
Query: 420 GASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV 479
A++IHGD++Q ERE L F+SG +PILVATDVAARGLDI + VIN+D P I+DYV
Sbjct: 459 PATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYV 518
Query: 480 HRIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDL 524
HRI +A FF + + A L ++++ ANQ VP+ L
Sbjct: 519 HRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEVPQWL 563
>AK110107
Length = 671
Score = 293 bits (751), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 237/409 (57%), Gaps = 21/409 (5%)
Query: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
+ G +VP P+ F +++ I A + PTP+Q S PI + +D++A A+TG
Sbjct: 168 VEASGHDVPEPVREFTNPPLDDHLIRNIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTG 227
Query: 198 SGKTLGYLLPGFMHIKRL--QNNPRSG-----------PTVLVLAPTRELATQILEEAVK 244
SGKT G+L P + NP +G PT L+LAPTREL +QI +E+ K
Sbjct: 228 SGKTGGFLFPILSQAFQTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRK 287
Query: 245 FGRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDE 304
F S + +YGGA G Q ATPGRL D++E RISL+ + YLVLDE
Sbjct: 288 FAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDE 347
Query: 305 ADRMLDMGFEPQIRKIVK--EIP--PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSV 360
ADRMLDMGFEPQIR+IV+ ++P RQTLM++AT P++++ +A D L + +++G V
Sbjct: 348 ADRMLDMGFEPQIRRIVEGEDMPNVQDRQTLMFSATSPRDIQMLARDFLKDYIFLSVGRV 407
Query: 361 DELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-F 419
N ITQ VE + +K L IL + +G LIF TKRM D L+ L Q F
Sbjct: 408 GSTSEN--ITQKVEYVEDVDKRSVLLDILHTHGAG-LTLIFVETKRMADSLSDFLINQNF 464
Query: 420 GASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV 479
A++IHGD++Q ERE+ L FR+GR PILVAT VAARGLDI ++ V+NYD PT I+DYV
Sbjct: 465 PATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYV 524
Query: 480 HRIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMA 528
HRI + FF + +L+ +L+ ANQ VP L +A
Sbjct: 525 HRIGRTGRAGNTGHSTAFFNRGNRGVVRELLDLLKEANQEVPAFLETIA 573
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/407 (41%), Positives = 234/407 (57%), Gaps = 21/407 (5%)
Query: 142 GDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKT 201
G VP P+ +F + I+R + PTP+Q + PI+L +D++A A+TGSGKT
Sbjct: 147 GREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKT 206
Query: 202 LGYLLP---GFMHIKRLQNNPRSG-----PTVLVLAPTRELATQILEEAVKFGRSSRISS 253
+ P G M Q R G P L+L+PTREL+ QI EEA KF + +
Sbjct: 207 AAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRV 266
Query: 254 TCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGF 313
YGGAP Q ATPGRL D+LE R+SL+ + YL LDEADRMLDMGF
Sbjct: 267 VVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGF 326
Query: 314 EPQIRKIVKEI----PPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAI 369
EPQ+R+IV+++ P RQT++++AT+PKE++R+A D L + + + +G V + I
Sbjct: 327 EPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGS--STDLI 384
Query: 370 TQNVELITPSEKLRRLEQILRSQ-DSGSK-----VLIFCTTKRMCDQLARTLTRQ-FGAS 422
Q VE + ++K L +L +Q DS + L+F TKR D L L F A+
Sbjct: 385 VQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPAT 444
Query: 423 AIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
+IHGD++Q ERE L F+SG +PILVATDVAARGLDI + V+N+D P I+DYVHRI
Sbjct: 445 SIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 504
Query: 483 XXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMAS 529
+A FF + +S A L ++++ +NQ VP L+ A+
Sbjct: 505 GRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAWLSRYAA 551
>AK119751
Length = 628
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 232/402 (57%), Gaps = 14/402 (3%)
Query: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
+ G + P + F+ ++ I+R ++ PTP+Q + PI L +D++A A+TG
Sbjct: 153 VEASGRDCPPHVDGFDQLDLGEVMMNNIRRCKYTKPTPVQRYAIPIGLAGRDIMACAQTG 212
Query: 198 SGKTLGYLLPGFMHIKRLQNNP-----RSGPTVLVLAPTRELATQILEEAVKFGRSSRIS 252
SGKT + P + + P ++ P L+LAPTREL +QI EEA KF S I
Sbjct: 213 SGKTAAFCFPIISGLVKAGYQPTGRQRKALPAALILAPTRELTSQIYEEARKFSYQSGIR 272
Query: 253 STCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMG 312
+YGGAP Q ATP RL+D++E R+SL + YL LDEADRMLDMG
Sbjct: 273 PVVIYGGAPVVNQLREMERGCDMLVATPRRLSDLIERARVSLAAIRYLALDEADRMLDMG 332
Query: 313 FEPQIRKIV--KEIPP--RRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSA 368
FEPQIR+IV +++PP +RQT++++AT+PKE++R+A D L + +T+G V +
Sbjct: 333 FEPQIRRIVEGEDMPPTGQRQTMLFSATFPKEIQRLAADFLHDYIFLTVGRVGS--STDL 390
Query: 369 ITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGD 427
I Q++E + +K + + + + L+F TKR DQL L RQ A++I GD
Sbjct: 391 IAQHIEYVQQDQKRETVLDCVNTVE--GLTLVFVETKRGADQLEDYLLRQNLPATSIRGD 448
Query: 428 KSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXX 487
KSQ+ERE L FRSG+ ILVATDVAARGLDI + VINYD P I+DYVHRI
Sbjct: 449 KSQAEREMALRAFRSGKCRILVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGR 508
Query: 488 XXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMAS 529
+A FF D D A L ++L Q VP LA++A+
Sbjct: 509 AGKKGLATAFFTDDDFGLARSLQEVLSETGQEVPGWLANIAT 550
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 230/417 (55%), Gaps = 27/417 (6%)
Query: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVV 191
+R I+ G VP P+ + E+L+ +++AG+ P+PIQ S P+ LQ +DV+
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 192 AIAKTGSGKTLGYLLPGFMHIKRL----QNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
IA+TGSGKT ++LP +I RL + N GP +V+APTRELA QI EE VKF
Sbjct: 357 GIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAT 416
Query: 248 SSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADR 307
I + GG Q ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 417 YLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADR 476
Query: 308 MLDMGFEPQIRKIVKEIPPR-----------------RQTLMYTATWPKEVRRIAEDLLV 350
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 477 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPAVERLARKYLR 536
Query: 351 HPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSK-VLIFCTTKRMCD 409
+PV VTIG+ + A ITQNV + SEK+ RL++IL D G K ++FC TK+ D
Sbjct: 537 NPVVVTIGTAGK--ATDLITQNVIMTKESEKMSRLQKIL--TDLGDKPAIVFCNTKKSAD 592
Query: 410 QLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVIN 468
A+ L + F + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 593 ARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVIN 652
Query: 469 YDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLA 525
Y+ P+ I+ Y HRI +A +F +++ DL ++L +N VP +LA
Sbjct: 653 YEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLIQSNSPVPPELA 709
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 265 bits (678), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 215/369 (58%), Gaps = 27/369 (7%)
Query: 185 LQCQDVVAIAKTGSGKTLGYLLP-----------GFMHIKRLQ-NNPRSGPTVLVLAPTR 232
L +D++A A+TGSGKT + LP G H +R N + P LVLAPTR
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 233 ELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRI 292
ELA QI EEA KF + + YGG P Q ATPGRL D++E ++
Sbjct: 61 ELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKV 120
Query: 293 SLKQVSYLVLDEADRMLDMGFEPQIRKIVKEI-PPR---RQTLMYTATWPKEVRRIAEDL 348
SL+ + YLV+DEADRMLDMGFEPQIRKIV+ + PR RQT++++AT+P E++R+A D
Sbjct: 121 SLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDF 180
Query: 349 LVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSG---SKV-----LI 400
L + + +T+G V + I Q VEL++ EK L +L+ Q G SK+ L+
Sbjct: 181 LSNYIFITVGRVGS--STDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLV 238
Query: 401 FCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLD 459
F TKR D L L ++ F A+AIHGD++Q ERE L F++G +PI+VATDVA+RGLD
Sbjct: 239 FVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLD 298
Query: 460 IKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQR 519
+ ++ VINYD P IEDYVHRI A FF + D A L++++ A Q
Sbjct: 299 VPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQD 358
Query: 520 VPRDLADMA 528
VP L A
Sbjct: 359 VPDWLVQYA 367
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 216/404 (53%), Gaps = 20/404 (4%)
Query: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
I V GD+VP P F P +L++++ G PTPIQ Q P+ L +D++ IA TG
Sbjct: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
Query: 198 SGKTLGYLLPGFMHIKRLQNN------PRSGPTVLVLAPTRELATQ---ILEEAV---KF 245
SGKTL ++LP M LQ P GP +++ P+RELA Q ++E+ + K
Sbjct: 63 SGKTLVFVLPLIM--VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 120
Query: 246 GRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEA 305
I GG Q ATPGRL D+L ++++L YL LDEA
Sbjct: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
Query: 306 DRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVA 365
DR++D+GFE IR++ +RQTL+++AT PK+++ A+ LV PV V +G A
Sbjct: 181 DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG--AA 238
Query: 366 NSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLAR-TLTRQFGASAI 424
N + Q VE + ++ L + L Q + VL+FC K D + L + A AI
Sbjct: 239 NLDVIQEVEYVKEDARIIYLLECL--QKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAI 296
Query: 425 HGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXX 484
HG K Q ERE + F++G+ +LVATDVA++GLD DI+ VINYD P IE+YVHRI
Sbjct: 297 HGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 356
Query: 485 XXXXXXXXVAYTFFC-DQDSKYAADLIKILEGANQRVPRDLADM 527
+A TF +Q DL +L+ A QR+P LA++
Sbjct: 357 TGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 197/334 (58%), Gaps = 14/334 (4%)
Query: 156 GFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRL 215
G P +++ +++ G + PIQ AL +D++A AKTG+GKTL + +P IK+L
Sbjct: 75 GLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIP---MIKQL 131
Query: 216 --QNNPRSG-----PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXX 268
+++ RS P VLVLAPTRELA Q+ +E + + ++S+ C+YGG Q
Sbjct: 132 MEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKE--SAPKLSTVCVYGGVSYNVQQNA 189
Query: 269 XXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGR+ D++ + L +V YLVLDEAD+ML +GFE + I++++P R
Sbjct: 190 LSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAER 249
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQV-TIGSVDELVANSAITQNVELITPSEKLRRLEQ 387
Q+++++AT P V++++ L +P+ + +G DE +A + L T + K L
Sbjct: 250 QSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPL-TSTSKRTVLSD 308
Query: 388 ILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
++ G K ++F TKR D+++ LT + A+HGD SQ +RE+ L+ FR G+ +
Sbjct: 309 LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTV 368
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHR 481
LVATDVAARGLDI ++ ++I+Y+ P E +VHR
Sbjct: 369 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 402
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 194/358 (54%), Gaps = 24/358 (6%)
Query: 140 VVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSG 199
VVG ++ T F+ P LK I+ AG+ T +Q + PI LQ +DV+A AKTG+G
Sbjct: 66 VVGSHLSE--TRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTG 123
Query: 200 KTLGYLLPGFMHIKRLQNNPRSGPTV--LVLAPTRELATQILEEAVKFGRSSRISSTCLY 257
KT+ +LLP I+ L PRS P++ LV+ PTRELA Q+ EA K + R +
Sbjct: 124 KTVAFLLPA---IELLSTLPRS-PSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVV 179
Query: 258 GGAPKGPQXXXXXXXX--XXXXATPGRLNDILE-----MRRISLKQVSYLVLDEADRMLD 310
G K PQ ATPGRL D LE RI K V LVLDEADR+LD
Sbjct: 180 IGGTKLPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRI--KGVKVLVLDEADRLLD 237
Query: 311 MGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQV--TIGSVDELVANSA 368
MGF I KI+ IP RQTL+++AT P+EVR+I+ + + T+ DE +S
Sbjct: 238 MGFRRDIEKIIAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDE-ETHSQ 296
Query: 369 ITQNVELITPSEKLRRLEQILR---SQDSGSKVLIFCTTKRMCDQLARTLTR-QFGASAI 424
++Q + L +L+ ++D+ KV++FCTT + +A L++ + I
Sbjct: 297 VSQMYMVAPLDLHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREI 356
Query: 425 HGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
H KSQS R KV FR + ILV++DV+ARG+D D+ +VI P E Y+HR+
Sbjct: 357 HSRKSQSARTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRL 414
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 195/396 (49%), Gaps = 15/396 (3%)
Query: 133 RHRHEITVVGDNVPAPITSFET----GGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
R + +I + G NVPAP+ +FE G ++ + + GF PTPIQ Q+ PI L +
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 189 DVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRS 248
+ A A TGSGKTL +L P M IK + G ++L PTRELA Q E K +
Sbjct: 185 ECFACAPTGSGKTLAFLFPILMKIK---PGSKEGVKAVILCPTRELAAQTTRECKKLAKG 241
Query: 249 SRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRM 308
+ + K +TP RL+ ++ R + L +V YLVLDE+D++
Sbjct: 242 RKFYIKLMTKDLSKSGNFKDMHCDILI--STPLRLDHAVQKRDLDLSRVEYLVLDESDKL 299
Query: 309 LDMGFEPQIRKIVKEIP-PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANS 367
++GF I +VK P +++AT P + +A ++ V+V +G + A+S
Sbjct: 300 FELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNS--ASS 357
Query: 368 AITQNVELI-TPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLT-RQFGASAIH 425
I Q + T KL L Q ++ VLIF +K +L + L A IH
Sbjct: 358 LIKQKLIFAGTEKGKLLALRQSF-AESLNPPVLIFVQSKERAKELYKELAFDDVRADVIH 416
Query: 426 GDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXX 485
D + +R+ + + R+G++ +L+AT+V ARG+D K + VINYDFP Y+HRI
Sbjct: 417 ADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRS 476
Query: 486 XXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVP 521
A TFF ++D + ++ +L + VP
Sbjct: 477 GRAGRSGEAITFFTEEDKPFLRNIANVLISSGCEVP 512
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 208/400 (52%), Gaps = 34/400 (8%)
Query: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMH 211
FE+ G E+ + ++ G+ PTPIQ ++ P+ L D+ A+A+TGSGKT +L+P
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 212 IKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXX 271
++R ++ +G L+L+PTR+LATQ L+ A + G+ + + + + GG Q
Sbjct: 111 LRR--HDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAE 168
Query: 272 XXXXXXATPGRL-NDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQT 330
ATPGRL + + E+ ++L+ V Y+V DEAD + +G Q+ I+ ++ RQT
Sbjct: 169 NPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQT 228
Query: 331 LMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVEL----ITPSEKLRRLE 386
L+++AT P+ + A+ L P + L + I+ +++L + EKL L
Sbjct: 229 LLFSATLPQALADFAKAGLRDP------QIVRLDLDKKISPDLKLAFFTLRQEEKLAALL 282
Query: 387 QILRSQ-DSGSKVLIFCTTKRMCDQLARTLTRQFGA--SAIHGDKSQSEREKVLSHFRSG 443
++R + S + +IF +TK + L L R+ G S +G Q R +S FR+
Sbjct: 283 YLVRERISSEEQTIIFVSTKHHVEFL-NILFREEGLEPSLSYGAMDQEARNIHISKFRAR 341
Query: 444 RSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDS 503
++ IL+ TDVAARGLDI + V+N+DFP + +VHR+ AYTF +D
Sbjct: 342 KTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDM 401
Query: 504 KYAAD-----------------LIKILEGANQRVPRDLAD 526
Y D L+K +EG N ++ R LA+
Sbjct: 402 AYLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALAN 441
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 196/376 (52%), Gaps = 22/376 (5%)
Query: 137 EITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKT 196
E+T GD PA + + ++++ G + PIQA ++ + L D+V A+T
Sbjct: 102 ELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRART 161
Query: 197 GSGKTLGYLLPGFMHIKRLQNNPRSG---------PTVLVLAPTRELATQILEEAVKFGR 247
G GKTL ++LP ++ L N PTVLVL PTRELA Q+ + +G
Sbjct: 162 GQGKTLAFVLP---ILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGA 218
Query: 248 SSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADR 307
+ +S+ C+YGG+ Q TPGR+ D +E ++ + + + VLDEAD
Sbjct: 219 TFGLSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADE 278
Query: 308 MLDMGFEPQIRKIVKEIP--PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVA 365
ML+MGF + I+ ++ + QTL+++AT P+ V++++ L + DE +
Sbjct: 279 MLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLK 338
Query: 366 NSAITQNVELITPSEKLRRLE---QILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGAS 422
SA +++ L P + R + I+R G + +IF TK L+ + G+
Sbjct: 339 ASASVRHLAL--PCNRAARAQVIPDIIRCYSRGGRTIIFTETKESASDLSGLIA---GSR 393
Query: 423 AIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
A+HGD +Q++RE +L+ FRSG+ +LVAT+VAARGLDI D++++I + P +E Y+HR
Sbjct: 394 ALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 453
Query: 483 XXXXXXXXXXVAYTFF 498
VA F
Sbjct: 454 GRTGRAGNTGVAVMLF 469
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 185/349 (53%), Gaps = 18/349 (5%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
T F+ P LK ++ AG+ T +Q + P+ LQ +DV+A AKTG+GKT+ +LLP
Sbjct: 126 TRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAI 185
Query: 210 MHIKRLQNNPRS----GPTVLVLAPTRELATQILEEAVKFGRSSR-ISSTCLYGGA-PKG 263
+ L N+ R +LV+ PTRELA Q+ EA K + R + + GG
Sbjct: 186 EVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTRLTQ 245
Query: 264 PQXXXXXXXXXXXXATPGRLNDILEMR---RISLKQVSYLVLDEADRMLDMGFEPQIRKI 320
Q ATPGRL D +E LK V LVLDEADR+LDMGF I +I
Sbjct: 246 EQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERI 305
Query: 321 VKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQV--TIGSVDELVANSAITQNVELITP 378
+ +P RQTL+++AT P+EVR+I+ + + T+ DE A + +I P
Sbjct: 306 IASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDE--ETHAQVSQMFMIAP 363
Query: 379 SE-KLRRLEQILR---SQDSGSKVLIFCTTKRMCDQLARTLTR-QFGASAIHGDKSQSER 433
+ L +L+ ++D+ KV+IFCTT + +A L++ + IH KSQS R
Sbjct: 364 LDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSAR 423
Query: 434 EKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
KV FR R ILV++DV+ARG+D D+ +VI P + Y+HR+
Sbjct: 424 TKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRL 472
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 169/332 (50%), Gaps = 9/332 (2%)
Query: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMH 211
FE E+L I GF P+PIQ +S PIAL D++A AK G+GKT + +P
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 212 IKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXX 271
I + +N V++L PTRELA Q + + G+ +I GG
Sbjct: 186 IDQDKN----AIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQ 241
Query: 272 XXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTL 331
TPGR+ D+ + LK S LV+DEAD++L F+P I+++++ +P RQ L
Sbjct: 242 PVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQIL 301
Query: 332 MYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS 391
M++AT+P V+ + L P I +DEL ITQ + +K+ L + S
Sbjct: 302 MFSATFPVTVKEFKDKYLPKP--YVINLMDELTL-KGITQFYAFVEERQKVHCLNTLF-S 357
Query: 392 QDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVA 450
+ ++ +IFC + + LA+ +T + IH Q R +V FR+G LV
Sbjct: 358 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 417
Query: 451 TDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 418 TDLFTRGIDIQAVNVVINFDFPKSAETYLHRV 449
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 184/335 (54%), Gaps = 7/335 (2%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
++F G PE++ G+ PT IQA++ P AL+ +D++ + +TGSGKT + LP
Sbjct: 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100
Query: 210 MHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXX 269
+ + Q+ P++ VL+PTRELA QI ++ G + +S T L GG + Q
Sbjct: 101 QALLK-QDKPQA-LFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSL 158
Query: 270 XXXXXXXXATPGRLNDIL-EMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGRL D L + + SL ++ YLVLDEAD++L++ F+ + I+ IP R
Sbjct: 159 AKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKER 218
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
+T +++AT +V ++ L +PV+V + S V + Q + K L +
Sbjct: 219 RTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTV--DTLRQEFYFVPADYKDCFLVHV 276
Query: 389 LRSQDSGSKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
L ++ GS ++IF T LA TL +F A +I G SQ +R L+ F++ I
Sbjct: 277 L-NELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNI 335
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
L+ TDVA+RGLDI+ + VVINYD P +DYVHR+
Sbjct: 336 LICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRV 370
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 186/380 (48%), Gaps = 7/380 (1%)
Query: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
I+SF+ G ++L+ I GF P+ IQ ++ + +DV+A A++G+GKT L
Sbjct: 30 ISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLS- 88
Query: 209 FMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXX 268
+ ++ + L+L+PTRELA Q + G I GG G
Sbjct: 89 ---VCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRK 145
Query: 269 XXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGR+ D+++ R + + + L+LDEAD ML GF+ QI + + +PP
Sbjct: 146 LEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPEL 205
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
Q + +AT P E+ + + PV++ + DEL V + K L +
Sbjct: 206 QVCLISATLPHEILEMTSKFMTDPVRILVKR-DELTLEGIKQFFVAVEKEEWKFDTLCDL 264
Query: 389 LRSQDSGSKVLIFCTTKRMCDQLA-RTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
+ + ++ +IFC TKR D L R + F SA+HGD Q ER+ ++ FRSG + +
Sbjct: 265 YDTL-TITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRV 323
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAA 507
L+ TDV ARGLD++ + +VINYD P E Y+HRI VA F +D +
Sbjct: 324 LITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILR 383
Query: 508 DLIKILEGANQRVPRDLADM 527
D+ + +P ++AD+
Sbjct: 384 DIEQYYSTQIDEMPMNVADL 403
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 9/332 (2%)
Query: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMH 211
FE E+L I GF P+PIQ +S PIAL D++A AK G+GKT + +P
Sbjct: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
Query: 212 IKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXX 271
I + +N V++L PTRELA Q + + G+ +I GG
Sbjct: 171 IDQEKN----AIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
Query: 272 XXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTL 331
TPGR+ D+ + LK S L++DEAD++L F+P + ++++ +P RQ L
Sbjct: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
Query: 332 MYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS 391
M++AT+P V+ + L P I +DEL ITQ + +K+ L + S
Sbjct: 287 MFSATFPVTVKEFKDKYLPKP--YVINLMDELTL-KGITQFYAFVEERQKVHCLNTLF-S 342
Query: 392 QDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVA 450
+ ++ +IFC + + LA+ +T + IH Q R +V FR+G LV
Sbjct: 343 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 402
Query: 451 TDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 403 TDLFTRGIDIQAVNVVINFDFPKTAETYLHRV 434
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 186/380 (48%), Gaps = 7/380 (1%)
Query: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
I+SF+ G ++L+ I GF P+ IQ ++ + +DV+A A++G+GKT L
Sbjct: 30 ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLS- 88
Query: 209 FMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXX 268
+ ++ + L+L+PTRELA Q + G I GG G
Sbjct: 89 ---VCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRK 145
Query: 269 XXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGR+ D+++ R + + + L+LDEAD ML GF+ QI + + +PP
Sbjct: 146 LEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPEL 205
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
Q + +AT P E+ + + PV++ + DEL V + K L +
Sbjct: 206 QVCLISATLPHEILEMTSKFMTDPVRILVKR-DELTLEGIKQFFVAVEKEEWKFDTLCDL 264
Query: 389 LRSQDSGSKVLIFCTTKRMCDQLA-RTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
+ + ++ +IFC TKR D L R + F SA+HGD Q ER+ ++ FRSG + +
Sbjct: 265 YDTL-TITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRV 323
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAA 507
L+ TDV ARGLD++ + +VINYD P E Y+HRI VA F +D +
Sbjct: 324 LITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILR 383
Query: 508 DLIKILEGANQRVPRDLADM 527
D+ + +P ++AD+
Sbjct: 384 DIEQYYSTQIDEMPMNVADL 403
>AK068197
Length = 181
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 125/167 (74%), Gaps = 2/167 (1%)
Query: 293 SLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHP 352
+L++V+YLVLDEADRMLDMGFEPQIRKIV +I P RQTL ++ATWP+EV +A L +P
Sbjct: 4 NLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNP 63
Query: 353 VQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLA 412
+V IGS D L AN +I Q +E+I+ EK RL ++L GS++LIF TK+ CD++
Sbjct: 64 YKVIIGSPD-LKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVT 122
Query: 413 RTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGL 458
R L + A +IHGDK+Q+ER+ VL+ F+SG+SPI+ ATDVAARGL
Sbjct: 123 RQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 169
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 171/354 (48%), Gaps = 24/354 (6%)
Query: 144 NVPAPIT-------------SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDV 190
N+PAP T FE E+L I GF P+PIQ +S PIAL D+
Sbjct: 128 NLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDI 187
Query: 191 VAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSR 250
+A AK G+GKT + +P I + ++ V++L PTRELA Q + + G+
Sbjct: 188 LARAKNGTGKTAAFCIPALEKI----DPEKNAIQVVILVPTRELALQTSQVCKELGKYLN 243
Query: 251 ISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD 310
I GG TPGR+ D+ LK S LV+DEAD++L
Sbjct: 244 IQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLA 303
Query: 311 MGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAIT 370
F+P I +++ +P RQ LM++AT+P V+ E L P I +DEL IT
Sbjct: 304 PEFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYLPRP--YVINLMDELTL-KGIT 360
Query: 371 QNVELITPSEKLRRLEQI-LRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDK 428
Q + +K+ L + L+ Q + S +IFC + + LA+ +T + IH
Sbjct: 361 QYYAFVEERQKVHCLNTLFLKLQINQS--IIFCNSVNRVELLAKKITELGYSCFYIHAKM 418
Query: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
Q R +V FR+G LV TD+ RG+ I+ + VVIN+DFP E Y+HR+
Sbjct: 419 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIGIQAVNVVINFDFPKTSETYLHRV 472
>Os07g0660000
Length = 444
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 179/348 (51%), Gaps = 41/348 (11%)
Query: 169 GFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVL 228
G+ +PT IQA+ P ALQ +DV+ + +TGSGKT + LP + L++ R VL
Sbjct: 2 GWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQAL--LEHEHRPCFFACVL 59
Query: 229 APTRELATQILEEAVKFGRSSRISSTCLYGGAP--------------------------- 261
APTRELA QI ++ G + + + L GG P
Sbjct: 60 APTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVWWRSSRACLPE 119
Query: 262 ---KGPQXXXXXXXXXXXXATPGRLNDIL-EMRRISLKQVSYLVLDEADRMLDMGFEPQI 317
KG TPGRL D L + S ++ YLVLDEAD +L + F+ +
Sbjct: 120 HLRKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAV 179
Query: 318 RKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELIT 377
I+ IP R+T +++AT ++V+++ L +PV+V + S LV + Q++ ++
Sbjct: 180 DDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLV--DTLRQDLYVVP 237
Query: 378 PSEKLRRLEQILRSQDSGSKVLIF---CTTKRMCDQLARTLTRQFGASAIHGDKSQSERE 434
K L +L ++ GS +++F C + R+ + R L +F A +I G SQ +R
Sbjct: 238 AKYKDCYLIHVL-NKMPGSMIMVFVRTCESTRLLALMLRNL--RFKAISISGQMSQDKRL 294
Query: 435 KVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
L+ FR+ ILV TDVA+RGLDI+ + VVINYDFP +DY+HR+
Sbjct: 295 GALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRV 342
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 12/353 (3%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
+ F PE+L+ IQ GF P+ +Q + P A+ DV+ AK+G GKT ++L
Sbjct: 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110
Query: 210 MHIKRLQNNPRSGPT-VLVLAPTRELATQILEEAVKFGRSS-RISSTCLYGGAP-KGPQX 266
I +P +G LVL TRELA QI E +F + + YGG K +
Sbjct: 111 QQI-----DPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKD 165
Query: 267 XXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD-MGFEPQIRKIVKEIP 325
TPGR+ + + +SLK V + +LDE D+MLD + +++I K P
Sbjct: 166 LLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTP 225
Query: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRL 385
+Q +M++AT KE+R + + + P+++ + +L + + ++L + +EK R+L
Sbjct: 226 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEAEKNRKL 284
Query: 386 EQILRSQDSGSKVLIFCTTKRMCDQLARTLTR-QFGASAIHGDKSQSEREKVLSHFRSGR 444
+L + D ++V+IF + +L + L F A +IH +Q ER +F+ G
Sbjct: 285 NDLLDALDF-NQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGH 343
Query: 445 SPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTF 497
ILVATD+ RG+DI+ + +VINYD P + Y+HR+ +A TF
Sbjct: 344 KRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITF 396
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 172/351 (49%), Gaps = 21/351 (5%)
Query: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
+ SFE G E++ + G S PT IQ P L VV + TGSGKTL YLLP
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168
Query: 209 FMHIKR------LQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPK 262
++R + PR P +VL PTREL Q+ A +R ST + GG+
Sbjct: 169 VQLLRRDEAMLGMSMKPRR-PRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRI 227
Query: 263 GPQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVK 322
PQ TPGR+ D ++ + + YLVLDEAD M D GF P IRK +
Sbjct: 228 RPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLA 287
Query: 323 EIPPRR--------QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVE 374
+ R QT++ TAT K V+++ ++ V + + + VA +A ++
Sbjct: 288 PLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVA-TARHDFIK 346
Query: 375 LITPSEKLRRLEQILR-SQDSGSKVLIFCTTKRMCDQLARTLTR-QFGASAIHGDKSQSE 432
L KL L Q+L S G+KV++FC T + LT Q HG+ E
Sbjct: 347 LSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEE 406
Query: 433 REKVLSHFRS--GRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHR 481
R + L+ FR+ G P LV TD+AARGLD+ D+ VI +DFP+ DY+HR
Sbjct: 407 RVENLNKFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHR 456
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 12/353 (3%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
+ F PE+L+ IQ GF P+ +Q + P A+ DV+ AK+G GKT ++L
Sbjct: 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110
Query: 210 MHIKRLQNNPRSGPT-VLVLAPTRELATQILEEAVKFGRSS-RISSTCLYGGAP-KGPQX 266
I +P +G LVL TRELA QI E +F + + YGG K +
Sbjct: 111 QQI-----DPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKD 165
Query: 267 XXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLD-MGFEPQIRKIVKEIP 325
TPGR+ + + +SLK V + +LDE D+MLD + +++I K P
Sbjct: 166 LLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTP 225
Query: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRL 385
+Q +M++AT KE+R + + + P+++ + +L + + ++L + +EK R+L
Sbjct: 226 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEAEKNRKL 284
Query: 386 EQILRSQDSGSKVLIFCTTKRMCDQLARTLTR-QFGASAIHGDKSQSEREKVLSHFRSGR 444
+L + D ++V+IF + +L + L F A +IH +Q ER +F+ G
Sbjct: 285 NDLLDALDF-NQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGH 343
Query: 445 SPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTF 497
ILVATD+ RG+DI+ + +VINYD P + Y+HR+ +A TF
Sbjct: 344 KRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITF 396
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 179/354 (50%), Gaps = 23/354 (6%)
Query: 161 ILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR 220
+L+ + G+ PTPIQA P+AL +D+ A TGSGKT + LP ++RL P+
Sbjct: 235 LLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLP---VLERLLFRPK 291
Query: 221 SGPT--VLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXA 278
P VL+L PTRELA Q+ K + + I + GG Q A
Sbjct: 292 RVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVA 351
Query: 279 TPGRLNDILEMR-RISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATW 337
TPGR+ D L + L+ ++ L+LDEADR+L++GF +I+++++ P RRQT++++AT
Sbjct: 352 TPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATM 411
Query: 338 PKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRL-----EQILRS- 391
+E+ + L PV+ L A+ ++ + L ++RR E +L +
Sbjct: 412 TEEINELVTLSLNKPVR--------LEADPSLKRPATLTEEVVRIRRAREANQEAVLLAL 463
Query: 392 --QDSGSKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPIL 448
+ KV+IF TK +L A+ +HG+ +Q++R + L F+ L
Sbjct: 464 CLKTFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDFL 523
Query: 449 VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQD 502
+ATDVAARG+DI +R VIN+ P Y+HR+ A TF D D
Sbjct: 524 IATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDDD 577
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 178/350 (50%), Gaps = 24/350 (6%)
Query: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF-- 209
FE G P +K + AG+ T +Q + P+ L+ +DV+ AKTG+GK+ +LLP
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403
Query: 210 -MHIKRLQNNPRSGPTV-LVLAPTRELATQILEEA-VKFGRSSRISSTCLYGGAP-KGPQ 265
++ + N R P L+L PTRELA Q+ EA V I L GG K Q
Sbjct: 404 VLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQ 463
Query: 266 XXXXXXXXXXXXATPGRLNDILEMRR---ISLKQVSYLVLDEADRMLDMGFEPQIRKIVK 322
ATPGRL D +E + + L + LVLDEAD +LD+GF I KIV
Sbjct: 464 RRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVD 523
Query: 323 EIPPRRQTLMYTATWPKEVRRIAEDLL----VHPVQVTIGSVDELVANSAITQNVELITP 378
+P +RQTL+++AT PKEVRR+++ +L V V +G+V+ + + L+ P
Sbjct: 524 SLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVE----TPTKVEQLYLVMP 579
Query: 379 SE-KLRRLEQILRS---QDSGSKVLIFCTTKRMCDQLARTLTR--QFGASAIHGDKSQSE 432
E + ++LR Q+ KV++FCTT M + + R + IH K Q
Sbjct: 580 HELHFHMVYRLLREHIDQEVDYKVIVFCTTA-MVTEFMYIMLRDLKLNVREIHSRKPQLY 638
Query: 433 REKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
R ++ FR ILV +DV+ RG++ + +VI P+ E Y+HR+
Sbjct: 639 RTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDREHYIHRL 688
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 16/360 (4%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
++F G ++ G PT +Q + P AL+ +DV+ IA+TGSGKT + LP
Sbjct: 77 STFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP-I 135
Query: 210 MHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXX 269
+H RL +P G L LAPTRELA Q+ E+ G + GG Q
Sbjct: 136 LH--RLGEDP-YGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGL 192
Query: 270 XXXXXXXXATPGRL----NDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIP 325
ATPGR+ ND ++ ++ + +LVLDEADR+LD+ FE +R I +P
Sbjct: 193 ARRPHVVVATPGRIATLINDDPDLAKV-FARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251
Query: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRL 385
+RQT +++AT +R + E L + + + Q + P K L
Sbjct: 252 KKRQTFLFSATISDNLRSLLE--LSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYL 309
Query: 386 EQIL--RSQDSGSKVLIFCTTKRMCDQLARTLTRQFG--ASAIHGDKSQSEREKVLSHFR 441
+L ++D+ V++F +T R C Q L + G A ++H K QS R L +F+
Sbjct: 310 FYLLSKMNEDNIRSVIVFVSTCRTC-QYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFK 368
Query: 442 SGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQ 501
S + P+L+ATDVA+RGLDI+ + +VINYD P DY+HR+ ++ +F Q
Sbjct: 369 SSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQ 428
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 181/380 (47%), Gaps = 11/380 (2%)
Query: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
SF+ G +L+ I GF P+ IQ + + DV+ A++G+GKT +
Sbjct: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
Query: 211 HIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXX 270
+ +S LVLAPTRELA QI + G + GG
Sbjct: 102 QLDYGLVECQS----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILA 157
Query: 271 XXXXXXXATPGRLNDILEMRRISLK--QVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGR+ D+L RR SL+ + VLDEAD ML GF+ QI I + +PP+
Sbjct: 158 SGVHVVVGTPGRVFDML--RRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 215
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
Q +++AT P E I + PV++ + DEL V + KL L +
Sbjct: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLDTLCDL 274
Query: 389 LRSQDSGSKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
+ + ++ +IF T+R D L + +R SA HGD Q+ R+ ++ FRSG S +
Sbjct: 275 YETL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAA 507
L+ TD+ ARG+D++ + +VINYD PT E+Y+HRI VA F D +
Sbjct: 334 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 393
Query: 508 DLIKILEGANQRVPRDLADM 527
D+ + + +P ++AD+
Sbjct: 394 DIQRFYNVTIEELPANVADL 413
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 189/376 (50%), Gaps = 23/376 (6%)
Query: 156 GFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRL 215
PE++K ++ GF TP+QA + P+ L +DV A TGSGKTL +++P ++R
Sbjct: 29 ALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRR 88
Query: 216 QNNPRSGPTV-LVLAPTRELATQILEEAVKFGRSSR-ISSTCLYGGAP-KGPQXXXXXXX 272
+ P+ + ++++PTREL++QI A F + + +SS L GG K
Sbjct: 89 PSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEG 148
Query: 273 XXXXXATPGRLNDILE-MRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTL 331
TPG+L D++E + ++ K + L+LDEADR+LD+GF+ QI I+ ++P R+T
Sbjct: 149 ANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTG 208
Query: 332 MYTATWPKEVRRIAEDLLVHPVQVTI----------GSVDELVANS---AITQNVELITP 378
+++AT + V+ +A+ L +PV+V + G+ EL + + +
Sbjct: 209 LFSATQTEAVKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEA 268
Query: 379 SEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLART--LTRQFGASAI---HGDKSQSER 433
S K +L L Q++G K++++ T D A L S I HG Q R
Sbjct: 269 SNKSSQLVDFL-VQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPR 327
Query: 434 EKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXV 493
EK L+ F + S ILV TDVAARGLDI + +++ YD P ++HR
Sbjct: 328 EKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGD 387
Query: 494 AYTFFCDQDSKYAADL 509
A F ++ Y L
Sbjct: 388 AIVFLLPKEDTYVEFL 403
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 179/380 (47%), Gaps = 11/380 (2%)
Query: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
SF+ G +L+ I GF P+ IQ + + DV+ A++G+GKT +
Sbjct: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
Query: 211 HIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXX 270
+ ++ LVLAPTRELA QI + G + GG
Sbjct: 102 QLDYAVVECQA----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILA 157
Query: 271 XXXXXXXATPGRLNDILEMRRISLK--QVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
TPGR+ D+L RR SL+ + VLDEAD ML GF+ QI I + +P +
Sbjct: 158 SGVHVVVGTPGRVFDML--RRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKI 215
Query: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
Q +++AT P E I + PV++ + DEL V + KL L +
Sbjct: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEEWKLDTLCDL 274
Query: 389 LRSQDSGSKVLIFCTTKRMCDQLARTLT-RQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
+ + ++ +IF T+R D L + R SA HGD Q+ R+ ++ FRSG S +
Sbjct: 275 YETL-AITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
Query: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAA 507
L+ TD+ ARG+D++ + +VINYD PT E+Y+HRI VA F D +
Sbjct: 334 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 393
Query: 508 DLIKILEGANQRVPRDLADM 527
D+ + + +P ++AD+
Sbjct: 394 DIQRFYNVVIEELPANVADL 413
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 136/247 (55%), Gaps = 13/247 (5%)
Query: 283 LNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVR 342
LN+ L M R YL LDEADR++D+GFE IR++ +RQTL+++AT P++++
Sbjct: 12 LNNFLHMSR-------YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQ 64
Query: 343 RIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFC 402
A+ LV P+ V +G AN + Q VE + ++ L + L Q + VL+FC
Sbjct: 65 NFAKSALVKPIIVNVGRAG--AANLDVIQEVEYVKEEARIIYLLECL--QKTPPPVLVFC 120
Query: 403 TTKRMCDQLAR-TLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIK 461
K D + L + A AIHG K ER+ F++ +LVATDVA++GLDI
Sbjct: 121 EHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIP 180
Query: 462 DIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFC-DQDSKYAADLIKILEGANQRV 520
DI+ VINYD P IE+YVHRI VA TF +Q DL ++L + QR+
Sbjct: 181 DIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRL 240
Query: 521 PRDLADM 527
P LAD+
Sbjct: 241 PPILADL 247
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 192/438 (43%), Gaps = 83/438 (18%)
Query: 150 TSFETGGFPPEILKEIQ-RAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
SF G P + +Q + GF +PT IQAQ+ P+A+ Q ++ A TG+GKTL YL P
Sbjct: 23 CSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP- 81
Query: 209 FMHIKRLQNNPR----SGPTVLVLAPTRELATQILEEAVKF-GRSSRISSTCLYGGAPKG 263
+H+ +++ PR G LVL PTREL Q+ A + R + + GG +
Sbjct: 82 IVHLLQMR-EPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRA 140
Query: 264 PQXXXXXXXXXXXXATPGRLNDILE-MRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVK 322
+ ATPGRL D L+ + ++V DEAD +L++GF + I++
Sbjct: 141 KEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILE 200
Query: 323 EI---------------PPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIG--------- 358
+ P +RQ L+ +AT ++V R+A+ L +PV + +
Sbjct: 201 HLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGK 260
Query: 359 -----------------------SVDELVANSAITQNVELITPSEKLRRLEQILRS---Q 392
+VD+ + + Q ++ +L L IL+S +
Sbjct: 261 NHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFER 320
Query: 393 DSGSKVLIFCTTKRMCD------------------QLARTLTRQFGASAI---HGDKSQS 431
KV++F +T CD QL ++F + + HG+ Q
Sbjct: 321 QLSHKVVVFLST---CDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQD 377
Query: 432 EREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXX 491
+R+K F S +S ILV+TDVAARGLD ++ +I YD P +YVHR+
Sbjct: 378 DRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEK 437
Query: 492 XVAYTFFCDQDSKYAADL 509
A F ++ Y DL
Sbjct: 438 GEALLFLQPIETDYLRDL 455
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 174/387 (44%), Gaps = 56/387 (14%)
Query: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
SFE G PP ++ + + G S+PT +Q+ + PI Q D V + TGSGKTL YLLP
Sbjct: 132 SFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILS 191
Query: 211 HIKRLQ-------NNPRSGPTVLVLAPTRELATQILEEAVK-FGRSSRISSTCLYGGAPK 262
I L+ ++ RSG +++AP+REL QI+ E K G + + L GGA +
Sbjct: 192 EIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANR 251
Query: 263 GPQXXXXXXXX-XXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIV 321
Q TPGR+++I ++ +LVLDE D++L + + +I+
Sbjct: 252 SRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRIL 311
Query: 322 KEIPPR-----------------RQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSV---D 361
+ + + RQT++ +AT P V R A PV V SV D
Sbjct: 312 EHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLD 371
Query: 362 ELV----------------ANSAITQNVELITPS-----------EKLRRLEQILRSQDS 394
+ +NS V + PS K+ L + + + ++
Sbjct: 372 SITVPRPVLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHALEA 431
Query: 395 GSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVA 454
+ + TK + D + + R A+ +HGD + R VL F+ G +LV +++
Sbjct: 432 QTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELS 491
Query: 455 ARGLDIKDIRVVINYDFPTGIEDYVHR 481
ARGLD+ + +VIN D PT Y HR
Sbjct: 492 ARGLDVPECDLVINLDLPTDSTHYAHR 518
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 185/443 (41%), Gaps = 79/443 (17%)
Query: 159 PEILKEIQRAGFSSPTPIQAQSWPIAL-QCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQN 217
P ++ ++R GF PTPIQ +P A Q +DV+ A+TGSGKTL + LP + Q
Sbjct: 207 PLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQE 266
Query: 218 ---------------NPRSGPT-VLVLAPTRELATQI---LEEAVKFGRSSRISSTCLYG 258
N R P L+L PTRELA Q+ L+EA KF RI + G
Sbjct: 267 KAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKF---LRIQVVPIVG 323
Query: 259 GAPKGPQXXXXXXXXXXXXATPGRLNDIL---EMRRISLKQVSYLVLDEADRMLDMGFEP 315
G Q TPGRL +++ I L +S+ VLDEADRM++ G
Sbjct: 324 GLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFH 383
Query: 316 QIRKIVKEIP------------------------PRRQTLMYTATWPKEV---RRIAEDL 348
+++ I++ +P +RQT +++AT +++ L
Sbjct: 384 ELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGL 443
Query: 349 LVHPVQVT--IGSVDELVANSAITQNVELITPS------EKLRR-------------LEQ 387
+ + + S++ L + + N E++ + EKL L
Sbjct: 444 VTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYY 503
Query: 388 ILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAI--HGDKSQSEREKVLSHFRSGRS 445
IL G + +IFCT+ L+ L R G + + H Q R K + FR +
Sbjct: 504 ILSVHGQG-RTIIFCTSIAALRHLSSIL-RVLGINVLTNHAQMQQRARMKAVDRFRESEN 561
Query: 446 PILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKY 505
ILVATD ARG+D D+R VI+Y P + Y+HR + D
Sbjct: 562 SILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAK 621
Query: 506 AADLIKILEGAN-QRVPRDLADM 527
L K L N Q+ P D A M
Sbjct: 622 FYSLCKSLSKENLQQFPVDHAYM 644
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 175/387 (45%), Gaps = 56/387 (14%)
Query: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
SFE G PP ++ + + G ++PT +Q+ + PI Q D V + TGSGKTL YLLP
Sbjct: 132 SFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILS 191
Query: 211 HIKRLQ-------NNPRSGPTVLVLAPTRELATQILEEAVK-FGRSSRISSTCLYGGAPK 262
I L+ ++ RSG +++AP+REL QI+ E K G + + L GGA +
Sbjct: 192 EIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANR 251
Query: 263 GPQXXXXXXXX-XXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIV 321
Q TPGR+++I ++ +LVLDE D++L + + +I+
Sbjct: 252 SRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRIL 311
Query: 322 KEIPPR-----------------RQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDEL- 363
+ + + RQT++ +AT P V R A PV V SV L
Sbjct: 312 EHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLE 371
Query: 364 ---VANSAITQ---------------NVELITPS-----------EKLRRLEQILRSQDS 394
V ++Q V+ + PS K+ L + + + ++
Sbjct: 372 SITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALEA 431
Query: 395 GSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVA 454
+ + TK + D + + R A+ +HGD + R VL F+ G +LV +++
Sbjct: 432 QTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELS 491
Query: 455 ARGLDIKDIRVVINYDFPTGIEDYVHR 481
ARGLD+ + +VIN D PT Y HR
Sbjct: 492 ARGLDVPECDLVINLDLPTDSTHYAHR 518
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Query: 156 GFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRL 215
G P I++ + G + PIQ A+Q +D++ A+TG+GKTL + +P I R
Sbjct: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
Query: 216 QNNPRSG--PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXX 273
SG P ++LAPTRELA Q+ +E F S+ + S C+YGG P Q
Sbjct: 149 NEKNGSGRNPLAIILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGV 205
Query: 274 XXXXATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMY 333
TPGR+ D+L ++L ++ ++VLDEAD+ML +GF+ + I++ +P RQ++++
Sbjct: 206 DVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLF 265
Query: 334 TATWPKEVRRIAEDLLVHPVQVTI 357
+AT P +R+I L P+ + +
Sbjct: 266 SATMPSWIRKITSKYLKDPIIIDL 289
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 52/382 (13%)
Query: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209
SF+ G ++ + +++ G TPIQ ++ P+ L+ +DVVA AKTGSGKT YLLP
Sbjct: 92 VSFDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPML 151
Query: 210 MHIKRLQNNPR---SGPTVLVLAPTRELATQILEEA---VKFGRSSRISSTCLYGGAPKG 263
+ +L R S P V +L PTREL Q+ EA ++F +S++ +
Sbjct: 152 HELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFC-TSKLKVVQVNASMSDK 210
Query: 264 PQXXXXXXXXXXXXATPGRLNDILE---MRRISLKQ-VSYLVLDEADRMLDMGFEPQIRK 319
TP + + +R S+K+ +S ++LDEAD +L E I+
Sbjct: 211 DIKVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKA 270
Query: 320 IVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPS 379
+V IP Q+++ +AT ++ ++ + LL +P +T+ V + I +NV+ S
Sbjct: 271 LVPHIPRSCQSILMSATSSADIEKLTKLLLHNPFILTLTEVGH-AKDDLIPKNVQQFWIS 329
Query: 380 ----EKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFG--ASAIHGDKSQSER 433
+K+ + +L+ + KVLIF + +L R +FG +S ++ + Q+ R
Sbjct: 330 CDAKDKMLYILVLLKLELIQKKVLIFVNSIDSAFKL-RLFLEKFGIRSSVLNAELPQNSR 388
Query: 434 EKVLSHFRSGRSPILVATDV---------------------------------AARGLDI 460
++ F + L+ATD RG+D
Sbjct: 389 LHIIQAFNARLFDYLIATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDF 448
Query: 461 KDIRVVINYDFPTGIEDYVHRI 482
K++ V+NYD P YVHR+
Sbjct: 449 KNVFTVVNYDMPPDPAGYVHRV 470
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 167/359 (46%), Gaps = 29/359 (8%)
Query: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
SF+ G EIL ++ GF P+ IQA ++ L+ + + ++GSGKTL YL P
Sbjct: 253 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 312
Query: 211 HIKRLQ------NNPRSGPTVLVLAPTRELATQILEEAVKFGRSSR-ISSTCLYGGAPKG 263
++++ + ++PR+ P V+VL PT ELA+Q+L +S S GG +
Sbjct: 313 NLRKEEVEGLHRSSPRN-PRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQK 371
Query: 264 PQXXXXXXXXXXXXATPGRLNDILEMRRISLKQVSYLVLDEADRML-DMGFEPQIRKIVK 322
Q ATPGR +L+ + L + +VLDE D + + FE + +++
Sbjct: 372 TQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLIT 431
Query: 323 EIPPRRQTLMYTATWPKEV-RRIAE-----DLLVHP-VQVTIGSVDELVANSAITQNVEL 375
P Q L TAT P ++ ++ E +L++ P V T ++E++ + + N E
Sbjct: 432 VAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEK 491
Query: 376 ---ITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTR------QFGASAIHG 426
S K L +I+ + K +IFC C ++ L R Q H
Sbjct: 492 NPETAFSNKKSALVKII-EESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHA 550
Query: 427 DKSQSEREKVLSHF---RSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
Q +R + F ++ S LV TD A+RG+D ++ V+ +D+P +YV R+
Sbjct: 551 ALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRV 609
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Query: 217 NNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXXXXX 276
N+P P +VLAPTRELA Q+ E F SS + + C+YGG P Q
Sbjct: 5 NSPGKFPLAIVLAPTRELAKQVERE---FSDSSNVETICVYGGTPISQQIRQLNYGVDVV 61
Query: 277 XATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTAT 336
TPGR+ D+L+ ++L +V ++VLDEAD+ML +GF+ + I+ +PP+RQTLM++AT
Sbjct: 62 IGTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSAT 121
Query: 337 WPKEVRRIAEDLLVHPVQVTIGS 359
P ++R+ + L +PV + + S
Sbjct: 122 MPTWIQRLTQKYLKNPVTIDLVS 144
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 165 IQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPT 224
I+ ++ T IQA+S P + DV+A AKTGSGKTL +L+P + RL+ +PR+G
Sbjct: 101 IRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTG 160
Query: 225 VLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLN 284
V+VL PTRELA Q A + R + + GG + ATPGRL
Sbjct: 161 VIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 285 DILE-MRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPR-RQTLMYTATWPKEVR 342
D ++ + + + L++DEADR+L+ FE Q+++I K +P + RQT++++AT ++V
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVE 280
Query: 343 RIAEDLLVHPVQVTIGSVDE 362
A ++T GS +E
Sbjct: 281 DFA--------KLTFGSKEE 292
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 6/303 (1%)
Query: 226 LVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQXXXXXXXXXXXXATPGRLND 285
LVL PT +LA + G+ + GG TP +
Sbjct: 648 LVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLG 707
Query: 286 ILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIA 345
+L+ R + + VLDEAD +L GF+ QI I++ +P + Q ++A+ E +
Sbjct: 708 MLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMC 766
Query: 346 EDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTK 405
+ PV++ + +EL + V + KL +L + + + ++ +IF T+
Sbjct: 767 RKYMNKPVEIIVPRDEELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEI-TRSIIFVNTR 825
Query: 406 RMCDQLARTLT-RQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIR 464
L + + + SAIHG Q R+K + F+SG S IL+ TD+ RG+D+
Sbjct: 826 HHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAP 883
Query: 465 VVINYDFPTGIEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDL 524
I YD PT Y+ + VA +F D + + + K + +P ++
Sbjct: 884 AAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEELPSNV 942
Query: 525 ADM 527
AD+
Sbjct: 943 ADL 945
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 320 IVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPS 379
+V ++P RQTL+++AT K V+ +A L P +++ + Q ++
Sbjct: 3 VVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVPLE 62
Query: 380 EKLRRLEQILRSQDSGSKVLIFCTTKRMCD---QLARTLTRQFGASAIHGDKSQSEREKV 436
+KL L ++ S++L+F ++ + ++ + L +HG ++ +
Sbjct: 63 QKLNMLWSFIKRH-LKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAI 121
Query: 437 LSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXVAYT 496
++ F+ G S +L +TD+ ARGLDI+D+ V+ D P I Y+HR+ A
Sbjct: 122 VAEFKEGHS-VLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKALI 180
Query: 497 FFCDQDSKYAADLIKILEGANQRVP 521
F C ++ K +++ L+ A ++P
Sbjct: 181 FLCPEEEK----MLEKLKAAESKIP 201
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 61/104 (58%)
Query: 423 AIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRI 482
+IHGDK+ +ER + L F +G ++V T V RG+D+ +R VI +D P I++YVH++
Sbjct: 1 SIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQV 60
Query: 483 XXXXXXXXXXVAYTFFCDQDSKYAADLIKILEGANQRVPRDLAD 526
+A F ++D +L++IL+ A +PR+LA+
Sbjct: 61 GRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAGAPIPRELAN 104
>Os01g0197200 Similar to Ethylene-responsive RNA helicase
Length = 71
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 219 PRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQ 265
P GP VLVLAPTRELA QI +EA KFG SS+I STC+YGG PKGPQ
Sbjct: 12 PGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQ 58
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,749,141
Number of extensions: 839212
Number of successful extensions: 2234
Number of sequences better than 1.0e-10: 53
Number of HSP's gapped: 2088
Number of HSP's successfully gapped: 55
Length of query: 792
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 683
Effective length of database: 11,344,475
Effective search space: 7748276425
Effective search space used: 7748276425
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 160 (66.2 bits)