BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0659600 Os11g0659600|AK107017
(306 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0659600 Virulence factor, pectin lyase fold family pro... 501 e-142
Os11g0683800 Virulence factor, pectin lyase fold family pro... 189 2e-48
Os12g0563700 Virulence factor, pectin lyase fold family pro... 170 1e-42
Os11g0659700 Virulence factor, pectin lyase fold family pro... 169 2e-42
Os05g0521600 Virulence factor, pectin lyase fold family pro... 116 2e-26
Os01g0743200 Virulence factor, pectin lyase fold family pro... 115 6e-26
Os01g0634600 Virulence factor, pectin lyase fold family pro... 108 4e-24
Os07g0607400 Virulence factor, pectin lyase fold family pro... 107 8e-24
Os10g0407000 Virulence factor, pectin lyase fold family pro... 104 9e-23
Os09g0571100 Virulence factor, pectin lyase fold family pro... 94 1e-19
Os07g0655600 Virulence factor, pectin lyase fold family pro... 84 1e-16
Os01g0300100 83 2e-16
Os03g0300500 Similar to Pectin methylesterase 6 (Fragment) 80 2e-15
Os08g0450200 Similar to Pectin methylesterase (Fragment) 80 2e-15
Os09g0433700 Similar to Pectin methylesterase (Fragment) 80 3e-15
Os06g0193200 Similar to Pectin methylesterase 8 (Fragment) 78 6e-15
Os04g0641200 Similar to Pectin methylesterase-like protein 77 2e-14
Os04g0458900 Similar to Pectin methylesterase-like protein 76 2e-14
Os01g0788400 Similar to Pectinesterase (EC 3.1.1.11) (Fragm... 74 1e-13
Os01g0311800 Similar to Pectin methylesterase 8 (Fragment) 74 2e-13
Os02g0288100 Similar to Pectinesterase (EC 3.1.1.11) (Fragm... 73 2e-13
Os07g0675100 Similar to Pectin methylesterase isoform alpha... 73 3e-13
Os03g0399000 Pectinesterase family protein 72 6e-13
Os04g0553500 Pectinesterase family protein 71 9e-13
Os01g0312500 Similar to Pectin methylesterase isoform alpha... 69 4e-12
Os07g0691100 Similar to Pectin methylesterase 6 (Fragment) 69 5e-12
Os08g0450100 Similar to Pectinesterase (EC 3.1.1.11) (Fragm... 68 9e-12
Os03g0309400 Pectinesterase family protein 67 2e-11
Os11g0172100 67 2e-11
>Os11g0659600 Virulence factor, pectin lyase fold family protein
Length = 306
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/306 (84%), Positives = 258/306 (84%)
Query: 1 MATTKTQLLMKLGXXXXXXXXXXXXXXXXXXFFEIWLGQNSMQYGTPTMDTPSIAGDIXX 60
MATTKTQLLMKLG FFEIWLGQNSMQYGTPTMDTPSIAGDI
Sbjct: 1 MATTKTQLLMKLGLLLLALASQPSPSQQSQAFFEIWLGQNSMQYGTPTMDTPSIAGDIVA 60
Query: 61 XXXXXXXXXXXXXGGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRY 120
GGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRY
Sbjct: 61 ANATAVHAAVDPAGGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRY 120
Query: 121 VTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGK 180
VTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGK
Sbjct: 121 VTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGK 180
Query: 181 QGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDC 240
QGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDC
Sbjct: 181 QGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDC 240
Query: 241 RIDLQARPRRAHGASDVEEAALAHQADQFYLERLXXXXXXXXXXXXXXXGLPRQGMGGLV 300
RIDLQARPRRAHGASDVEEAALAHQADQFYLERL GLPRQGMGGLV
Sbjct: 241 RIDLQARPRRAHGASDVEEAALAHQADQFYLERLRLSQLRHRDRWRRRQGLPRQGMGGLV 300
Query: 301 VRRLHL 306
VRRLHL
Sbjct: 301 VRRLHL 306
>Os11g0683800 Virulence factor, pectin lyase fold family protein
Length = 423
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 117/171 (68%), Gaps = 4/171 (2%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G + TI AL VP+ N +R + LKPG FREK+ + K ++TF+SDP NPAV+
Sbjct: 49 GDTTFTTITAALEKVPEGNK-KRVILDLKPGAEFREKIFLNLSKPFITFKSDPKNPAVIA 107
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPT---GGKQGQTVALRVAE 191
W++TAAT GKDGKP+G GS VAIE+ F+A+GVVFKND P G + GQ VALR+
Sbjct: 108 WSDTAATRGKDGKPVGTVGSTTVAIESDYFVAHGVVFKNDAPMAKPGAEGGQAVALRLFG 167
Query: 192 KRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
+A+ +NCTI+GGQ LYD G HY ++C I G VD IFGFGRS+Y+ C I
Sbjct: 168 TKAAIYNCTIDGGQDTLYDHKGLHYIKDCLIMGSVDFIFGFGRSYYEGCTI 218
>Os12g0563700 Virulence factor, pectin lyase fold family protein
Length = 414
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 117/174 (67%), Gaps = 6/174 (3%)
Query: 74 GGGK-QYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAV 132
G GK ++RTI +A+ AVP+ N +R + ++PG ++EK+ + K ++TF +P +P
Sbjct: 112 GDGKGKFRTITEAIKAVPEYNK-KRVILDIRPG-TYKEKLLIPFTKPFITFVGNPRSPPT 169
Query: 133 VVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPT---GGKQGQTVALRV 189
++W++ AAT GKDG+P+G SA VA+EA F+A+ ++FKN+ P G GQ VALRV
Sbjct: 170 IMWDDRAATHGKDGQPMGTMLSATVAVEADYFMASSIIFKNNAPMAAPGAHGGQAVALRV 229
Query: 190 AEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRID 243
+ + +NCTI+GGQ LYD G HYF+NC I G VD IFGFGRS Y DC I+
Sbjct: 230 FGSKVAMYNCTIDGGQDTLYDHKGLHYFKNCLIRGSVDFIFGFGRSLYADCTIE 283
>Os11g0659700 Virulence factor, pectin lyase fold family protein
Length = 359
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 128/230 (55%), Gaps = 27/230 (11%)
Query: 36 WLGQNSMQYGTPTM-DTPSIAGDIXXXXXXXXX--XXXXXXGGGKQYRTIADALAAVPDA 92
WL N + Y TP DT AG + GG + RTIA ALA VPD+
Sbjct: 33 WLADNQLLYTTPDAEDTAMDAGVVAASKAQVHVGVDPAGSGSGGGKRRTIAAALAGVPDS 92
Query: 93 N--NTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVVWNNTAATPGKDGKPLG 150
+ Y LKPGQVFREKV VG+GK YVT +SDPANPAV+VWN+TAAT GKDG+PLG
Sbjct: 93 GGGEPKSYELSLKPGQVFREKVVVGKGKAYVTLKSDPANPAVIVWNDTAATLGKDGEPLG 152
Query: 151 AAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRASFFNCTIE-------- 202
SA + +EA NF+A+GVV KND P+G + G+TVALRVA +ASFF CTIE
Sbjct: 153 HVRSATLTVEADNFVASGVVIKNDAPSGLEGGKTVALRVAGTKASFFKCTIEAGGQGAAQ 212
Query: 203 --------GGQGVLYDEMGTHYFRNCTI------NGGVDAIFGFGRSFYD 238
G G F NCTI +GG D GR++ D
Sbjct: 213 AQRAPKYDGLDGTTNPAFLGFSFHNCTIEAGAGDSGGADDKVYLGRAWDD 262
>Os05g0521600 Virulence factor, pectin lyase fold family protein
Length = 398
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 78 QYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVVWNN 137
+ +I A+ ++P N R V ++ G + EKV + + +VT E A+ VV W +
Sbjct: 110 NFTSIQAAVDSIPLIN-LARVVIKVNAG-TYTEKVTISPLRAFVTIEGAGADKTVVQWGD 167
Query: 138 TAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTG-----GKQGQTVALRVAEK 192
TA T G G+P G SA A+ A F+A + FKN P GKQG VALR++
Sbjct: 168 TADTVGPLGRPFGTFASATFAVNAQFFVAKNITFKNTAPVPRPGALGKQG--VALRISAD 225
Query: 193 RASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQAR 247
A+F C G Q LYD +G HY+R+C I G VD IFG S Y+ C + AR
Sbjct: 226 NAAFLGCNFLGAQDTLYDHLGRHYYRDCYIEGSVDFIFGNALSLYEGCHVHAIAR 280
>Os01g0743200 Virulence factor, pectin lyase fold family protein
Length = 384
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 79 YRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVVWNNT 138
+ TI A+ ++P N R V ++ G + EKV + + ++T E A+ +V W +T
Sbjct: 96 FTTIQAAVDSLPIINLVR-VVIKVNAG-TYTEKVNISPMRAFITLEGAGADKTIVQWGDT 153
Query: 139 AATP-GKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPT---GGKQGQTVALRVAEKRA 194
A +P G+ G+PLG SA A+ A F+A + FKN P G Q VALRV+ A
Sbjct: 154 ADSPSGRAGRPLGTYSSASFAVNAQYFLARNITFKNTSPVPKPGASGKQAVALRVSADNA 213
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQAR 247
+F C G Q LYD G HY++ C I G VD IFG S ++DC + AR
Sbjct: 214 AFVGCRFLGAQDTLYDHSGRHYYKECYIEGSVDFIFGNALSLFEDCHVHAIAR 266
>Os01g0634600 Virulence factor, pectin lyase fold family protein
Length = 325
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +R I DA+ A P AN++ R V R+KPG V+R KV V K YVT A V+
Sbjct: 49 GKGDHRRIQDAIDAAP-ANDSSRTVIRIKPG-VYRRKVVVD--KPYVTLTGTSATSTVIA 104
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
WN + + D P V++ AS+F+A + F+N T G VA+RVA RA
Sbjct: 105 WNESWVS---DESP-------TVSVLASDFVAKRLTFQN---TFGDSAPAVAVRVAGDRA 151
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
+F+ C Q L DE G HY+R C + G D IFG GR+ +D C +
Sbjct: 152 AFYGCRFVSFQDTLLDETGRHYYRGCYVQGATDFIFGNGRALFDKCHL 199
>Os07g0607400 Virulence factor, pectin lyase fold family protein
Length = 324
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G RT+ A+ VP A NTRR ++PG V+REKV V K +V+ V+
Sbjct: 81 GTGHSRTVQGAVDMVP-AGNTRRVKIVVRPG-VYREKVTVPITKPFVSLIGMGTGHTVIT 138
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPT---GGKQGQTVALRVAE 191
W++ A+ G G +G SA VA+EA F A+ + F+N G Q VALR++
Sbjct: 139 WHSRASDVGASGHQVGTFYSASVAVEADYFCASHITFENSAAAAAPGAVGQQAVALRLSG 198
Query: 192 KRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQARPRRA 251
+ + C I G Q L+D +G HY NC I G +D IFG RS Y C + A A
Sbjct: 199 DKTVLYKCRILGTQDTLFDNIGRHYLYNCDIQGSIDFIFGNARSLYQGCTLHAVATSYGA 258
Query: 252 HGAS 255
AS
Sbjct: 259 IAAS 262
>Os10g0407000 Virulence factor, pectin lyase fold family protein
Length = 336
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 79 YRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANP--AVVVWN 136
+ T+ A+ AVP N R V RL PG +RE V V + K VT + +P V+ W+
Sbjct: 34 FATVQAAVDAVPVGNRVRT-VIRLAPG-TYREPVYVAKAKNLVTLSGEAGSPEATVITWD 91
Query: 137 NTAA--TPGKDGKPLGAA--GSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEK 192
NTA + + +G G + +E +FIA + F+N P G GQ VALRV
Sbjct: 92 NTATRIKHSQSSRVIGTGTFGCGTIIVEGEDFIAENITFENSAPQGS--GQAVALRVTAD 149
Query: 193 RASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQA 246
R +F+NC G Q LY G Y R+C I G D IFG + + C I ++
Sbjct: 150 RCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEGNCDFIFGNSIALLEHCHIHCKS 203
>Os09g0571100 Virulence factor, pectin lyase fold family protein
Length = 408
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 74 GGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVV 133
G + TI A+ AVPD TR + + G ++REKV V K +T V
Sbjct: 97 AGCANFTTIQKAVDAVPDYAATRTLI-AVDAG-IYREKVVVWSNKTALTLHGRGNLNTTV 154
Query: 134 VWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPT---GGKQGQTVALRVA 190
WN T+ + G SA + A F+A + F+N P G GQ VALRVA
Sbjct: 155 AWNATSNSTGGS-----TVYSATFTVLAPAFVAYNITFQNTSPPPEPGDAGGQAVALRVA 209
Query: 191 EKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRID 243
A+F C + Q L DE G H FR C I G +D IFG RS Y C I
Sbjct: 210 GDEAAFHWCGVYSAQDTLLDESGRHLFRGCYIEGSIDFIFGNARSLYVGCTIS 262
>Os07g0655600 Virulence factor, pectin lyase fold family protein
Length = 308
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
GG + + A+ +VPD N R ++ + EKV + K+++ E D +
Sbjct: 54 GGGDFTLVQSAVNSVPDGN--RDWIKIHVNAGSYEEKVTIPSQKQFIVLEGDGS------ 105
Query: 135 WNNTAATPGKDGKPL------------GAA--GSAIVAIEASNFIANGVVFKN--DGPTG 178
WN G + G+A S+ + A NF+A + F+N +
Sbjct: 106 WNTEITFAGHAHASIDELLNHGYSDVGGSATFDSSTFIVLADNFVARSISFRNTYNKYDK 165
Query: 179 GKQGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYD 238
K Q VA + R++F++C G Q L D G HYF +C + GGVD IFG+G+S YD
Sbjct: 166 SKPVQAVAALIGGDRSAFYDCAFYGFQDTLCDLKGRHYFHHCYVRGGVDFIFGYGQSIYD 225
Query: 239 DCRID 243
+C ++
Sbjct: 226 NCTLE 230
>Os01g0300100
Length = 335
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 74 GGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVV 133
G G + I DA+ +VP AN RR++ V++EKV++ K ++ E + +
Sbjct: 48 GSGADFTRIQDAINSVPFAN--RRWIRIHIAAGVYKEKVSIPANKSFILLEGEGRQQTSI 105
Query: 134 VWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKR 193
W + A G D A S A A++F+A + FKN T G+ VA VA R
Sbjct: 106 EWADHAGGGGGDSG---TADSPTFASYAADFMARDITFKN---TYGRMAPAVAALVAGDR 159
Query: 194 ASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQA 246
++F+ C G Q L D +G HY+ C + G VD IFG +S + C I A
Sbjct: 160 SAFYRCGFVGLQDTLSDLLGRHYYERCYVEGAVDFIFGEAQSIFHRCHISTAA 212
>Os03g0300500 Similar to Pectin methylesterase 6 (Fragment)
Length = 565
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G ++TI +ALA VP +T YV +K G ++E V+V + D A ++
Sbjct: 251 GSGDFKTINEALAKVP-VKSTGTYVMYVKAG-TYKEYVSVARNVTNLVMIGDGATKTIIT 308
Query: 135 WNNT--AATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEK 192
N + KD + A G+ F G+ +N G K Q VALRV
Sbjct: 309 GNKSFMLNITTKDTATMEAIGNG--------FFMRGIGVENTA--GSKNHQAVALRVQSD 358
Query: 193 RASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQ 245
+++F+ C +G Q LY Y+R+CTI G +D IFG + +CRI ++
Sbjct: 359 QSAFYECQFDGHQDTLYTHTSRQYYRDCTITGTIDFIFGNAQVVLQNCRIQVR 411
>Os08g0450200 Similar to Pectin methylesterase (Fragment)
Length = 664
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +++TI DALAA+P T RYV +K G V+ E V + + VT D A ++
Sbjct: 357 GSGKFKTINDALAAMPK-KYTGRYVIYVKEG-VYEEYVTITKKMANVTMYGDGAKKTIIT 414
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
N DG L +A + F+ + F+N + Q VAL V ++
Sbjct: 415 GNRNFV----DG--LTTYKTATFNAQGDGFMGVALGFRNTARAA--KHQAVALLVQSDKS 466
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI------DLQARP 248
F NC +EG Q LY ++RNC I+G VD IFG + + +C I D Q
Sbjct: 467 IFLNCRMEGHQDTLYAHSKAQFYRNCVISGTVDFIFGDAAAVFQNCVIVLRRPLDNQQNI 526
Query: 249 RRAHGASDVEEA 260
A G +D EA
Sbjct: 527 ATAQGRADRREA 538
>Os09g0433700 Similar to Pectin methylesterase (Fragment)
Length = 617
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +++TI +ALAA+P + RYV +K G V+ E V + + VT D + ++V
Sbjct: 310 GSGKFKTINEALAAMP-KTYSGRYVIYVKEG-VYAEYVTITKKMASVTMYGDGSRKSIVT 367
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ A DG L +A A + F+A G+ F+N G + Q VAL V ++
Sbjct: 368 GSKNFA----DG--LTTFKTATFAAQGDGFMAIGMGFQN--TAGAAKHQAVALLVQSDKS 419
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQARP 248
F NC ++G Q LY ++RNC I G +D +FG + + +C + L+ RP
Sbjct: 420 VFLNCWMDGFQDTLYAHSKAQFYRNCVITGTIDFVFGDAAAVFQNCVLTLR-RP 472
>Os06g0193200 Similar to Pectin methylesterase 8 (Fragment)
Length = 585
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G YRT+ +A+AA P+ N+ R V R++ G + E V V K + D V+
Sbjct: 280 GSGNYRTVGEAVAAAPN-NSAARTVIRVRAG-TYEENVEVPPYKTNIALVGDGRGATVIT 337
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ +AA + SA + F+A V F+N G +GQ VALRV+ A
Sbjct: 338 GSRSAADGWTTFR------SATFGVSGEGFMARDVTFRNTA--GAAKGQAVALRVSADMA 389
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
+ + C +EG Q LY ++R C ++G VD +FG + C +
Sbjct: 390 AAYRCGVEGHQDSLYAHSFRQFYRECAVSGTVDLVFGDAAAVLQACEL 437
>Os04g0641200 Similar to Pectin methylesterase-like protein
Length = 971
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G ++TI +A+ AVP + TR ++ V GE YVT S + P + +
Sbjct: 666 GSGDFKTITEAVNAVPKNSPTRFVIY-----------VKAGEYNEYVTIPS--SLPNIFM 712
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDG--PTGGKQG-QTVALRVAE 191
+ + G G A +A + NG V K+ G T G +G Q VAL V
Sbjct: 713 YGDGPTKTRVLGNKSNKDGVATMATRTFSAEGNGFVCKSMGFVNTAGPEGHQAVALHVQG 772
Query: 192 KRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCR------IDLQ 245
+ FFNC EG Q LY +FRNC + G +D IFG + + C +D Q
Sbjct: 773 DMSVFFNCKFEGYQDTLYVHANRQFFRNCEVTGTIDYIFGNSAAVFQSCLMTVRKPMDNQ 832
Query: 246 ARPRRAHGASD 256
A AHG +D
Sbjct: 833 ANMVTAHGRTD 843
>Os04g0458900 Similar to Pectin methylesterase-like protein
Length = 568
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G Q++TI +A+ ++P + R YV +K G ++ E V V + K + D + V
Sbjct: 263 GSGQFKTIQEAVNSMPKGHQGR-YVIYVKAG-LYDEIVMVPKDKVNIFMYGDGPKRSRVT 320
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ A DG + +A ++EA+ FI + F N G ++ Q VALR+
Sbjct: 321 GRKSFA----DG--ITTMKTATFSVEAAGFICKNMGFHNTA--GAERHQAVALRINGDLG 372
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI------DLQARP 248
+F+NC + Q LY +FRNC I+G +D IFG + + +C I D Q
Sbjct: 373 AFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIITRRPMDNQQNS 432
Query: 249 RRAHGASD 256
AHG +D
Sbjct: 433 VTAHGRTD 440
>Os01g0788400 Similar to Pectinesterase (EC 3.1.1.11) (Fragment)
Length = 546
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +Y TI +A+ A PD +R YV +K G V++E + VG+ KR + D + V+
Sbjct: 241 GSGKYTTIKEAVDAAPDGGKSR-YVIYVKKG-VYKENLEVGKTKRVLMIVGDGMDQTVIT 298
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ DG SA +A+ I + +N G ++ Q VALRV+ RA
Sbjct: 299 GSRNVV----DGST--TFNSATLALSGDGIILQDLKVENTA--GAEKQQAVALRVSADRA 350
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQARPRRAH 252
C ++G Q LY ++R+C ++G VD +FG + C + + RP +A
Sbjct: 351 VINRCRLDGYQDTLYAHQLRQFYRDCAVSGTVDFVFGNAAAVLQGCVLTAR-RPAQAQ 407
>Os01g0311800 Similar to Pectin methylesterase 8 (Fragment)
Length = 557
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 75 GGKQYRTIADALAAVP-DANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVV 133
G + T++DA+AA P + + T+ Y V+ E V V + K+YV D V+
Sbjct: 248 GAGNFTTVSDAVAAAPTNLDGTKGYFVIHVTAGVYAENVVVPKNKKYVMMVGDGIGQTVI 307
Query: 134 VWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKR 193
N + DG SA A+ F+A + F+N G + Q VALR
Sbjct: 308 TGNRSVV----DG--WTTFNSATFAVLGQGFVAVNMTFRNTA--GPAKHQAVALRCGADL 359
Query: 194 ASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
++F+ C+ E Q LY ++R C + G VD +FG + DC +
Sbjct: 360 STFYQCSFEAYQDTLYTHSLRQFYRACDVYGTVDYVFGNAAVVFQDCTL 408
>Os02g0288100 Similar to Pectinesterase (EC 3.1.1.11) (Fragment)
Length = 554
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +RTI+DA+ A P+ + RR V +K G+ + E V VG K + F D VV
Sbjct: 243 GTGTHRTISDAVKAAPE-RSGRRTVIHVKAGR-YDENVKVGRKKTNLVFVGDGKGVTVVS 300
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ A +A A S F+ + +N G ++ Q VALRV+ RA
Sbjct: 301 AGRSVA------DNFTTFHTATFAASGSGFMMRDMTVENWA--GPERHQAVALRVSADRA 352
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
+ + C+I G Q LY H++R+C + G VD +FG + C +
Sbjct: 353 AVYRCSIIGYQDTLYAHSNRHFYRDCDVYGTVDFVFGNAAAVLQRCNL 400
>Os07g0675100 Similar to Pectin methylesterase isoform alpha (EC 3.1.1.11)
(Fragment)
Length = 579
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G ++ T+++A+AA P+ N+ RYV +K G F E V VG K + F D V+
Sbjct: 274 GSGKFTTVSEAVAAAPN-NSETRYVIYIKAGGYF-ENVEVGSEKTNIMFVGDGTWKTVIK 331
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ + SA +A+ + F+A + +N G + Q VALRV +
Sbjct: 332 ASRNVVDNSTTFR------SATLAVVGTGFLARDITVEN--AAGPSKHQAVALRVNADLS 383
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
+F+ C+ G Q LY ++R+C I G VD IFG +C +
Sbjct: 384 AFYRCSFAGYQDTLYAHSLRQFYRDCDIYGTVDFIFGDAAVVLQNCNL 431
>Os03g0399000 Pectinesterase family protein
Length = 603
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G + I+ AL A+P+A +Y+ +K G V+ E V V +T D + ++V
Sbjct: 285 GSGDFTNISAALDALPEAY-AGKYIIYVKEG-VYDETVNVTSRMANITMYGDGSKKSIVT 342
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ A DG + +A A++ F A + +N G ++ Q +ALRV ++
Sbjct: 343 GSKNIA----DGVRMWK--TATFAVDGDRFTAMRLGIRN--TAGEEKQQALALRVKADKS 394
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
FFNC IEG Q L+ + ++R+C I+G VD IFG + + C I
Sbjct: 395 IFFNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIFGDAAAMFQRCII 442
>Os04g0553500 Pectinesterase family protein
Length = 203
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 176 PTGGKQG-QTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGR 234
P G QG Q VA R++ +A FF C G Q L D+ G HYFR+C I G +D +FG GR
Sbjct: 10 PMPGMQGWQAVAFRISGDKAFFFGCGFYGAQDTLCDDAGRHYFRDCYIEGSIDFVFGNGR 69
Query: 235 SFYDDCRIDLQAR 247
S Y DC + A+
Sbjct: 70 SLYKDCELHSTAQ 82
>Os01g0312500 Similar to Pectin methylesterase isoform alpha (EC 3.1.1.11)
(Fragment)
Length = 426
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 96 RRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSA 155
+RYV +K G + E V VG+ K+ + F D V+ A+ DG SA
Sbjct: 142 KRYVIHIKAG-AYMENVEVGKSKKNLMFIGDGIGKTVI----KASRNVVDGST--TFRSA 194
Query: 156 IVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTH 215
VA+ +NF+A + +N G + Q VALRV ++F+ C+ G Q LY
Sbjct: 195 TVAVVGNNFLARDLTIENSA--GPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQ 252
Query: 216 YFRNCTINGGVDAIFGFGRSFYDDCRI 242
+FR C I G +D IFG + C +
Sbjct: 253 FFRECDIYGTIDFIFGNSAVVFQSCNL 279
>Os07g0691100 Similar to Pectin methylesterase 6 (Fragment)
Length = 566
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 14/176 (7%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G +TI +A+A VP N RY +K G + E V+VG V D ++
Sbjct: 252 GSGDVKTIGEAVAKVP-PKNKERYTIYVKAG-TYNEYVSVGRPATNVNMIGDGIGKTIIT 309
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
N L +A + + F G+ +N G + Q VALR A
Sbjct: 310 GNKNFKMN------LTTKDTATMEAIGNGFFMRGITVENTA--GPENHQAVALRAQSDMA 361
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRIDLQARPRR 250
F+ C +G Q LY +FR+CT++G +D IFG + +C + +PR+
Sbjct: 362 VFYQCEFDGYQDTLYPHAQRQFFRDCTVSGTIDFIFGNSQVVLQNCLL----QPRK 413
>Os08g0450100 Similar to Pectinesterase (EC 3.1.1.11) (Fragment)
Length = 557
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 75 GGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVVV 134
G Y T++ A+ A P + RYV +K G V++E V + + K + D V+
Sbjct: 241 GSGNYTTVSAAVDAAP-TESASRYVIYVKKG-VYKETVDIKKKKWNLMLVGDGMGVTVIS 298
Query: 135 WNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRA 194
+ DG SA VA+ F+A V F+N G + Q VALR +
Sbjct: 299 GHRNYV----DGYT--TFRSATVAVNGKGFMARDVTFENTA--GPSKHQAVALRCDSDLS 350
Query: 195 SFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDCRI 242
F+ C EG Q LY ++R+C ++G VD +FG + + +C +
Sbjct: 351 VFYRCGFEGYQDTLYAHSLRQFYRDCRVSGTVDFVFGNAAAVFQNCTL 398
>Os03g0309400 Pectinesterase family protein
Length = 345
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 74 GGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRYVTFESDPANPAVV 133
G +++T+ A+ AVP NT + L+ G ++REKV + E K ++ + +
Sbjct: 56 GPEDEFKTVQSAIDAVP-VGNTEWVIVHLRSG-IYREKVMIPETKPFIFVRGNGKGRTSI 113
Query: 134 VWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTG---GKQGQTVALRVA 190
N+ +A+ A SA + A N I G+ +N G + +TVA V
Sbjct: 114 --NHESASSHN-------AESAAFTVHADNVIVFGLSIRNSARAGLPNVPEVRTVAAMVG 164
Query: 191 EKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFY 237
+ +F++C L+D G HY+ +C I G +D IFG G+S +
Sbjct: 165 GDKIAFYHCAFYSPHHTLFDVAGRHYYESCYIQGNIDFIFGGGQSIF 211
>Os11g0172100
Length = 533
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 158 AIEASNFIANGVVFKNDGPTGGKQGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYF 217
A+ A F+A GV F+N G GQ VALR + R +F+ C+ EG Q LY ++
Sbjct: 298 AVNADGFVACGVTFRN--AAGAGSGQAVALRASGDRVAFYRCSFEGHQDTLYAHTLRQFY 355
Query: 218 RNCTINGGVDAIFGFGRSFYDDCRIDLQARP 248
R C + G VD +FG + C I ++ P
Sbjct: 356 RECAVAGTVDFVFGNAAAVLQRCSIRVRRPP 386
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,725,398
Number of extensions: 402235
Number of successful extensions: 869
Number of sequences better than 1.0e-10: 29
Number of HSP's gapped: 844
Number of HSP's successfully gapped: 29
Length of query: 306
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 205
Effective length of database: 11,762,187
Effective search space: 2411248335
Effective search space used: 2411248335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)