BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0536000 Os10g0536000|AK121221
(160 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 337 2e-93
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 320 3e-88
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 156 5e-39
Os05g0182500 Rad6 (Ubiquitin carrier protein) 122 8e-29
Os07g0166800 Rad6 (Ubiquitin carrier protein) 122 1e-28
Os03g0791800 Rad6 (Ubiquitin carrier protein) 122 2e-28
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 104 3e-23
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 103 5e-23
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 101 3e-22
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 101 3e-22
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 101 3e-22
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 98 2e-21
Os05g0460200 Similar to Ubiquitin carrier protein 88 3e-18
Os01g0839700 Similar to Ubiquitin carrier protein 86 1e-17
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 84 4e-17
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 79 2e-15
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 77 4e-15
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 77 7e-15
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 76 1e-14
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 74 3e-14
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 71 4e-13
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 70 6e-13
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 69 1e-12
D17786 66 1e-11
Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 ... 63 7e-11
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 337 bits (864), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYP 60
MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYP
Sbjct: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYP 60
Query: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
Query: 121 LDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL 160
LDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL
Sbjct: 121 LDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL 160
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 320 bits (820), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 149/160 (93%), Positives = 156/160 (97%)
Query: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYP 60
MSGGIARGRLAEERKAWRKNHPHGFVAKPET+ADG+ NLMIWHCTIPGKQGTDWEGGY+P
Sbjct: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFP 60
Query: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
Query: 121 LDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL 160
LDQPNPADPAQTDGYH+FIQD EYKRRVR+QAKQYP ++
Sbjct: 121 LDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 156 bits (395), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 82/105 (78%), Gaps = 2/105 (1%)
Query: 34 DGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTV 93
DGS NLM+W C IPGK+GTDWEGGY+PLT+ F+EDYP+ P CKFP GFFH NVY SG V
Sbjct: 1 DGSVNLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAV 60
Query: 94 CLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIF 138
CLSIL+ + W+P+ITV+QIL+GIQ+L D PNP AQ Y ++
Sbjct: 61 CLSILS--TAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELY 103
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (307), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHF 65
AR RL + K ++ P G P+ N+M+W+ I G T W+GG + LTL F
Sbjct: 5 ARKRLMRDFKRLMQDPPAGISGAPQ-----DNNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHIFIQDKPEYKRRVRVQAKQ 155
P PA ++ +F ++K EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHF 65
AR RL + K +++ P G P N+M+W+ I G T W+GG + LTL F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPH-----DNNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHIFIQDKPEYKRRVRVQAKQ 155
P PA ++ +F ++K EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHF 65
AR RL + K +++ P G P N+M+W+ I G T W+GG + LTL F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPH-----DNNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPVVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHIFIQDKPEYKRRVRVQAKQ 155
P PA ++ +F ++K EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG + + +H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP-----AGEDMFHWQATIMGPPDSPYAGGVFLVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H++ D+P+Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRPKYETTARSWTQKY 145
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E RK+ P A P +L W TI G + + GG + + +H
Sbjct: 1 MASKRIQKELMDLRKDPPTSCSAGP-----AGEDLFHWQATIMGPSDSPYAGGVFFVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F +HPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVNFQTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSISSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H++ +P Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHVYKSQRPRYEETARAWTQKY 145
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E K +K+ P A P + ++ W T+ G + + GG + +T+H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPV-----AEDMFHWQATLMGPSDSPYAGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVALKTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H++ D+ +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 145
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG + +T+H
Sbjct: 1 MASKRIQKELKDLQKDPPTSCSAGPV-----GEDMFHWQATIMGPSDSPYAGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL + W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H++ D+ +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRHKYENTARTWTQRY 145
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG + + +H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPV-----GEDMFHWQATIMGPSDSPFAGGVFLVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H++ D+ +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 145
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+A R+ +E K +++ P A P S ++ W TI G + + GG + +T+H
Sbjct: 1 MALRRIIKELKDLQRDPPTSCSAGPV-----SDDMFHWQATIMGPNDSPYSGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G +CL IL + W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 156
NP DP + H+ D+ Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMCKTDRLRYESTARGWTQKY 145
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 19 KNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKF 78
KN GF A + D S N+ W TI G T ++GGY+ + F ++YP+ PP +F
Sbjct: 21 KNPVDGFSAG---LVDDS-NVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRF 76
Query: 79 PQGFFHPNVYPSGTVCLSILN---EDSG--------WRPAITVKQILVGIQDLLDQPNPA 127
+HPNVYP G VC+SIL+ ED W P TV+ I++ I +L PN
Sbjct: 77 TSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDE 136
Query: 128 DPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL 160
PA + + + + ++K++VR ++ +L
Sbjct: 137 SPANIEAAKDWREKRDDFKKKVRRIVRKSQEML 169
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 37 ANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLS 96
+N+ W TI G T ++GGY+ + F ++YP+ PP +F +HPNVYP G VC+S
Sbjct: 35 SNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCIS 94
Query: 97 ILN-----------EDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEY 145
IL+ W P TV+ I++ I +L PN PA + + + + ++
Sbjct: 95 ILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDF 154
Query: 146 KRRVRVQAKQYPALL 160
K++VR ++ +L
Sbjct: 155 KKKVRRLVRKSQEML 169
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSED 68
RL E A G A PE N+ W TI G T +EG Y L+L F +
Sbjct: 51 RLQSELMALMMGGDPGVSAFPE-----GDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
YP KPPK +F FHPNV G +CL IL + W A V+ IL+ IQ LL +PN
Sbjct: 106 YPYKPPKVRFETPCFHPNVDAHGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNNDS 163
Query: 129 PAQTDGYHIFIQDKPEYKRRVR 150
P T ++ ++ E+++ V
Sbjct: 164 PLNTQAAALW-PNQDEFRKMVE 184
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 38 NLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
NL W TI G QG+ +EGG + L + F DYP KPP F +H NV +G + + I
Sbjct: 84 NLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVDSTGNLSMDI 143
Query: 98 LNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEY 145
L E GW PA+T+ ++L+ I+ ++ P+P P H+++ D+ ++
Sbjct: 144 LRE--GWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKH 189
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 31 TMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
T +G +LM T+ +G + GG + TL YP +PPK K +HPN+
Sbjct: 50 TFPNGKDDLMNIEITLRPDEGY-YVGGAFVFTLQVPPTYPHEPPKVKCTTKVYHPNIDLD 108
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVR 150
G VCL+IL ED W+P + + I+ G+ L QPN DP D + D +++R V+
Sbjct: 109 GNVCLNILRED--WKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQ 166
Query: 151 V 151
Sbjct: 167 T 167
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 38 NLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
N+ ++ I G + +EGG + L L E+YP PK +F +HPN+ G +CL I
Sbjct: 33 NMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 98 LNEDSGWRPAITVKQILVGIQDLLDQPNPADP 129
L + W PA+ ++ +L+ IQ LL PNP DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSED 68
+LA+E K+ ++ P G + + I G GT +E G + + L S D
Sbjct: 14 QLAKELKSLDESPPEGI-----KVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRD 68
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
+P PPK F FHPN+ SG +C++ L +D W P++ ++ +L+ ++ LL +P P
Sbjct: 69 FPQSPPKGFFLTKIFHPNIATSGEICVNTLKKD--WNPSLGLRHVLLVVRCLLIEPFPES 126
Query: 129 PAQTDGYHIFIQDKPEYKRRVRV 151
+ +++ EY R R+
Sbjct: 127 ALNEQAGKLLLENYEEYARHARL 149
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 31 TMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
+ +G +LM + TI +G + GG + T YP +PPK K +HPN+
Sbjct: 50 SFPNGKDDLMNFEVTIRPDEGY-YVGGKFIFTFQVPPAYPHEPPKVKCKTKVYHPNIDLE 108
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVR 150
G VCL+IL ED W+P + V I+ G+ L QPN DP + + + +++R V+
Sbjct: 109 GNVCLNILRED--WKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFERNVQ 166
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPET-MADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
+R RL +E K ++ A P+ + +N+ W I G T +EGG + L
Sbjct: 4 SRARLFKEYKEVQREKS----ADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFS 59
Query: 65 FSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
E YP PP+ +F FHPNV + +G +CL IL + W PA T++ + I L+
Sbjct: 60 IPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH 117
Query: 124 PNPADPAQTDGYHIF 138
P P P D ++
Sbjct: 118 PEPDSPLNCDSGNLL 132
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 31 TMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
+ +G +LM + + +G + GG + T S YP +PPK K +HPN+
Sbjct: 17 SFPNGKDDLMNFEIIVRPDEGY-YLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLE 75
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPE 144
G VCL+IL ED W+P + + ++ G+ L QPN DP + + ++D P+
Sbjct: 76 GNVCLNILRED--WKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAV-LRDNPK 126
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSED 68
R+ +E K + PHG ++L+ + I G T + G + L + E
Sbjct: 10 RMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPER 69
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILN--EDSGWRPAITVKQILVGIQDLLDQPNP 126
YP +PP F +HPN+ G +CL ILN W+P++ + +L I LL PNP
Sbjct: 70 YPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNP 129
Query: 127 ADPAQTDGYHIFIQDKPEYKRRV 149
DG I + +Y R+V
Sbjct: 130 -----DDGLMAEISREYKYNRQV 147
>D17786
Length = 103
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 70 PSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADP 129
P KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PN DP
Sbjct: 26 PFKPPKSSFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNGDDP 83
Query: 130 AQTDGYHIFIQDKPEYK 146
+ H++ D+ +Y+
Sbjct: 84 LVPEIAHMYKTDRAKYE 100
>Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19)
(Ubiquitin- protein ligase 5) (Ubiquitin carrier protein
5)
Length = 144
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 28 KPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNV 87
K E + DG + G + ++GG + + + + YP K P F +HPNV
Sbjct: 21 KVEMVNDGMQEFFV---EFRGPTESIYQGGVWKVRVELPDAYPYKSPSIGFVNKIYHPNV 77
Query: 88 -YPSGTVCLSILNEDSGWRPAITVKQIL-VGIQDLLDQPNPADPAQTDGYHIFIQDKPEY 145
SG+VCL ++N+ W P + + V + LL PNP+DP + + ++D+P Y
Sbjct: 78 DEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAY 135
Query: 146 KRRVR 150
+++V+
Sbjct: 136 EQKVK 140
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.139 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,975,215
Number of extensions: 318089
Number of successful extensions: 601
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 582
Number of HSP's successfully gapped: 28
Length of query: 160
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 67
Effective length of database: 12,179,899
Effective search space: 816053233
Effective search space used: 816053233
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)