BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0282300 Os09g0282300|Os09g0282300
(306 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0282300 Similar to WIP1 protein (Fragment) 551 e-157
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 313 1e-85
Os01g0859100 Similar to WIP1 protein (Fragment) 276 1e-74
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 274 8e-74
Os09g0307400 257 7e-69
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 246 1e-65
Os08g0504000 Similar to WIP5 protein 222 2e-58
Os09g0485600 Similar to WIP1 protein (Fragment) 218 3e-57
Os01g0871200 Zinc finger, C2H2-type domain containing protein 108 5e-24
Os04g0165200 Zinc finger, C2H2-type domain containing protein 106 3e-23
Os03g0838800 Zinc finger, C2H2-type domain containing protein 101 6e-22
Os08g0562300 Zinc finger, C2H2-type domain containing protein 100 2e-21
Os12g0170400 Zinc finger, C2H2-type domain containing protein 99 5e-21
Os02g0572900 Zinc finger, C2H2-type domain containing protein 95 8e-20
Os01g0195000 Zinc finger, C2H2-type domain containing protein 88 8e-18
Os08g0554400 Zinc finger, C2H2-type domain containing protein 87 2e-17
AK067268 84 2e-16
Os09g0555700 Zinc finger, C2H2-type domain containing protein 83 2e-16
Os04g0566400 Zinc finger, C2H2-type domain containing protein 83 3e-16
Os10g0419200 Zinc finger, C2H2-type domain containing protein 82 6e-16
Os02g0672100 Zinc finger, C2H2-type domain containing protein 80 2e-15
Os01g0242200 Zinc finger, C2H2-type domain containing protein 79 4e-15
Os02g0518500 79 5e-15
Os01g0572300 Zinc finger, C2H2-type domain containing protein 78 1e-14
Os09g0485500 Similar to T6J4.5 protein (WIP6 protein) 76 2e-14
Os01g0935000 Zinc finger, C2H2-type domain containing protein 76 4e-14
Os03g0197700 Zinc finger, C2H2-type domain containing protein 75 5e-14
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 551 bits (1420), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/293 (91%), Positives = 267/293 (91%)
Query: 1 MANPSKDHIFPNQRSLISQSSSPHNSLPKKEEIPLLSLLPSIHDHNKIHGCYKQEKEEEV 60
MANPSKDHIFPNQRSLISQSSSPHNSLPKKEEIPLLSLLPSIHDHNKIHGCYKQEKEEEV
Sbjct: 1 MANPSKDHIFPNQRSLISQSSSPHNSLPKKEEIPLLSLLPSIHDHNKIHGCYKQEKEEEV 60
Query: 61 MEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTSQXXXXXXXXXXXXXXXXXXXXXX 120
MEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTSQ
Sbjct: 61 MEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTSQELDGDDDDDHKVEVEREEEEEA 120
Query: 121 XXXXLCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQ 180
LCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQ
Sbjct: 121 ASDDLCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQ 180
Query: 181 YRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFA 240
YRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFA
Sbjct: 181 YRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFA 240
Query: 241 CRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDHRER 293
CRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDHRER
Sbjct: 241 CRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDHRER 293
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 138/161 (85%), Positives = 149/161 (92%)
Query: 130 FSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLR 189
+GKLTKG+YWIPTP+QILIGPT F+CPVC KTF+RYNN+QMHMWGHGSQYR+GPESLR
Sbjct: 253 IGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLR 312
Query: 190 GTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLA 249
GTQP AMLRLPC+CCAAGCRNN+DHPRARPLKDFRTLQTHYKRKH KPF CRKCGK A
Sbjct: 313 GTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFA 372
Query: 250 VRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDH 290
VRGDWRTHEKNCG+ W+CACGSDFKHKRSLKDHIRAFGR H
Sbjct: 373 VRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGH 413
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 135/158 (85%)
Query: 133 GKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQ 192
G +YWIPTP QIL+GP F C VC KTF+RYNN+QMHMWGHG +YR+GPESL+GTQ
Sbjct: 194 GVAMSSRYWIPTPAQILVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQ 253
Query: 193 PAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRG 252
AML+LPC+CCAAGC+NNV HPRARPLKDFRTLQTHYKRKH AKPF CR+C KP AV+G
Sbjct: 254 TLAMLKLPCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKG 313
Query: 253 DWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDH 290
DWRTHEKNCG+RW CACGSDFKHKRSL DH+R+FG H
Sbjct: 314 DWRTHEKNCGKRWFCACGSDFKHKRSLNDHVRSFGAHH 351
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 274 bits (700), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 134/155 (86%), Gaps = 3/155 (1%)
Query: 139 KYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAA--- 195
+YWIPTP QILIGP F C VC K F+RYNN+QMHMWGHG +YR+GPESL+GTQ A
Sbjct: 195 RYWIPTPAQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLA 254
Query: 196 MLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWR 255
ML+LPC+CCAAGCRNNV HPRARPLKDFRTLQTHYKRKH AKPFACR+C KP AV+GDWR
Sbjct: 255 MLKLPCYCCAAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWR 314
Query: 256 THEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDH 290
THEKNCG+RW CACGSDFKHKRSL DH+R+FG H
Sbjct: 315 THEKNCGKRWFCACGSDFKHKRSLNDHVRSFGGGH 349
>Os09g0307400
Length = 385
Score = 257 bits (657), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 135/165 (81%), Gaps = 7/165 (4%)
Query: 133 GKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGT- 191
G +YWIP+ +IL+G T F+C VC KTF+R+NN+QMHMWGHGSQYR+G ESLRG
Sbjct: 166 GGQAPSQYWIPSAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAI 225
Query: 192 ------QPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG 245
PA+++RLPC+CCA GCRNNV+HPRARPLKDFRTLQTHY+RKH A+P+ACR+CG
Sbjct: 226 TVGGAAPPASLMRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG 285
Query: 246 KPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDH 290
K AVRGDWRTHEKNCG+ W C CGSDFKHKRSLKDH+R+FG H
Sbjct: 286 KRFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRSFGGGH 330
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
Query: 139 KYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRG-PESLRGTQPAAML 197
+YWIPT QIL G T F+CPVC KTF+RYNNLQMHMWGHGSQYRRG +LRG QP AML
Sbjct: 44 QYWIPTAAQILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRGAQPTAML 103
Query: 198 RLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTH 257
RLPC+CCAAGCRN++DHPRARPLKDFRTLQTHY+R+H A+ FACR+C K AVRGDWRTH
Sbjct: 104 RLPCYCCAAGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKRFAVRGDWRTH 163
Query: 258 EKNCGRRWHCACGSDFKHKRSLKD 281
EKNCGR W CACG+ F+HKRSL D
Sbjct: 164 EKNCGRLWRCACGAHFRHKRSLND 187
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/118 (84%), Positives = 108/118 (91%)
Query: 170 LQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTH 229
+QMHMWGHGSQYR+GPESLRG QP AMLRLPC+CCAAGCRNN+DHPRARPLKDFRTLQTH
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
Query: 230 YKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFG 287
YKRKH KPF CRKCGK AV+GDWRTHEKNCG+ W+C CGS+FKHKRSLKDH RAFG
Sbjct: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFG 118
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 106/116 (91%)
Query: 171 QMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHY 230
QMHMWGHGSQYR+GPESLRG QP AMLRLPC+CCAAGCRNN+DHPRA+PLKDFRTLQTHY
Sbjct: 1 QMHMWGHGSQYRKGPESLRGIQPTAMLRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQTHY 60
Query: 231 KRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAF 286
KRKH KPF CRKCGK AV+GDWRTHEKNCG+ W+C CGS+FKHKRSLKDH RAF
Sbjct: 61 KRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAF 116
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCF---C 203
+IL THF C +C K F R NL+MHM GHG +Y+ + ++ +++ P C
Sbjct: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSC 333
Query: 204 CAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGDWRTHEKNCG 262
GC+ N +H + +PLK ++ HYKR HC K + C +C K +V D +THEK+CG
Sbjct: 334 PYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCG 393
Query: 263 R-RWHCACGSDFKHKRSLKDHIRAF 286
R +W C+CG+ F K L H+ F
Sbjct: 394 RDKWLCSCGTTFSRKDKLFGHVALF 418
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 146 TQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPE--SLRGTQPAAMLRLPCFC 203
+ +L TH+ C VC K F R NL+MHM HG +Y+ S AA R C
Sbjct: 195 SYLLARYTHY-CQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAAARRCSYSC 253
Query: 204 CAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKC-GKPLAVRGDWRTHEKNCG 262
A GCR N HPR + LK + HY+R HC K + C +C GK AV D RTHEK+CG
Sbjct: 254 PAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHEKHCG 313
Query: 263 R-RWHCACGSDFKHKRSLKDHIRAFGRDH 290
RW C+CG+ F K L H+ F H
Sbjct: 314 ELRWLCSCGTFFSRKDKLMGHVALFAAGH 342
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLR-GTQPAAMLRLPCF--- 202
+IL HF C VC K F R NL+MHM GHG +Y+ + G P+ R P
Sbjct: 157 EILAPHVHF-CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSPS---RSPAAADA 212
Query: 203 --------CCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGD 253
C GC+ N +H +PLK ++ HY+R HC K F CR+C K +V D
Sbjct: 213 AARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVAD 272
Query: 254 WRTHEKNCGR-RWHCACGSDFKHKRSLKDHIRAF 286
RTHEK+CGR RW C+CG+ F K L H+ F
Sbjct: 273 LRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIF 306
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 146 TQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRR-----GPESL---RGTQPAAML 197
++L TH+ C VC K F R NL+MHM HG +Y+ P L G + A
Sbjct: 196 AELLAKYTHY-CQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDETMAAA 254
Query: 198 RLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGDWRT 256
C GCR N H + +PLK + HYKR HC K + C +CG K +V D RT
Sbjct: 255 ARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVLSDLRT 314
Query: 257 HEKNCG-RRWHCACGSDFKHKRSLKDHIRAF 286
HEK+CG RW C+CG+ F K L H+ F
Sbjct: 315 HEKHCGDHRWLCSCGTSFSRKDKLIGHVSLF 345
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCF---- 202
+IL THF C +C K F R NL+MHM GHG +Y+ + P P
Sbjct: 222 EILAPHTHF-CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERR 280
Query: 203 --CCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGDWRTHEK 259
C AGC+ N H +PLK ++ HYKR HC K C +CG K +V D +THEK
Sbjct: 281 YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEK 340
Query: 260 NCGR-RWHCACGSDFKHKRSLKDHIRAF 286
+CGR RW C+CG+ F K L H+ F
Sbjct: 341 HCGRDRWLCSCGTSFSRKDKLFAHVALF 368
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 146 TQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPA--AMLRLPCFC 203
+++L HF C +C K F R NL+MHM HG +++ R QP A + C
Sbjct: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSC 223
Query: 204 CAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG--KPLAVRGDWRTHEKNC 261
AGC N H R RPLK + H++R HC K +AC +CG K AV D R+H ++C
Sbjct: 224 PYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHC 283
Query: 262 GR--RWHCACGSDFKHKRSLKDHIRAF 286
G +W C+CG+ F K L H+ F
Sbjct: 284 GEEAQWRCSCGTTFSRKDKLFGHLALF 310
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ + C +C K F R NLQ+H GH P L+ P ++R
Sbjct: 61 IALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNL-----PWKLKQRNPKEVVRKKV 115
Query: 202 FCC-AAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKN 260
+ C AGC V H AR L D ++ H+ RKH K + C KC K AV DW+ H K
Sbjct: 116 YVCPEAGC---VHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV 172
Query: 261 CG-RRWHCACGSDFKHKRSLKDHIRAF 286
CG R + C CG+ F + S H RAF
Sbjct: 173 CGTREYRCDCGTLFSRRDSFITH-RAF 198
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 148 ILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAG 207
L+ F C VC K F R NLQ+H GH P L+ P R C
Sbjct: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
Query: 208 CRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-RRWH 266
C V H +R L D ++ HY RKH K + C KC K AV+ DW+ H K CG R +
Sbjct: 118 C---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
Query: 267 CACGSDFKHKRSLKDHIRAF 286
C CG+ F + S H RAF
Sbjct: 175 CDCGTLFSRRDSFITH-RAF 193
>AK067268
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 148 ILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAG 207
L+ F C VC K F R NLQ+H GH P L+ P R C
Sbjct: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
Query: 208 CRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-RRWH 266
C V H +R L + ++ HY RKH K + C KC K AV+ DW+ H K CG R +
Sbjct: 118 C---VHHDPSRALGNLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
Query: 267 CACGSDFKHKRSLKDHIRAF 286
C CG+ F + S H RAF
Sbjct: 175 CDCGTLFSRRDSFITH-RAF 193
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ F C VC K F R NLQ+H GH P L+ P R
Sbjct: 63 IALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKEARRRVY 117
Query: 202 FCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNC 261
C C V H +R L D ++ HY RKH K + C KC K AV+ DW+ H K C
Sbjct: 118 LCPEPSC---VHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTC 174
Query: 262 G-RRWHCACGSDFKHKRSLKDHIRAF 286
G R + C CG+ F + S H RAF
Sbjct: 175 GTREYRCDCGTLFSRRDSFITH-RAF 199
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ F C VC K F R NLQ+H GH P L+ PA R
Sbjct: 84 IALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPAQAQRRRV 138
Query: 202 FCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNC 261
+ C V H AR L D ++ H+ RKH K + C KC K AV+ DW+ H K C
Sbjct: 139 YLCPE--PTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKIC 196
Query: 262 G-RRWHCACGSDFKHKRSLKDHIRAF 286
G R + C CG+ F + S H RAF
Sbjct: 197 GTREYRCDCGTLFSRRDSFITH-RAF 221
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYR-----RGPESLRGTQPAAM 196
I + L+ F C VC K F R NLQ+H GH ++ ++ PA
Sbjct: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAPR 85
Query: 197 LRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRT 256
R+ C C V H AR L D ++ H+ RKH K + C +CGK AV DW+
Sbjct: 86 KRV-YVCPEPTC---VHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKA 141
Query: 257 HEKNCG-RRWHCACGSDFKHKRSLKDHIRAF 286
H KNCG R + C CG F K SL H RAF
Sbjct: 142 HVKNCGTREYRCDCGILFSRKDSLLTH-RAF 171
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ F C VC K F R NLQ+H GH P L+ P R
Sbjct: 82 IALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPLQAQRRRV 136
Query: 202 FCCAA-GCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKN 260
+ C C V H +R L D ++ H+ RKH K + C KC K AV+ DW+ H K
Sbjct: 137 YLCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI 193
Query: 261 CG-RRWHCACGSDFKHKRSLKDHIRAF 286
CG R + C CG+ F + S H RAF
Sbjct: 194 CGTREYRCDCGTLFSRRDSFITH-RAF 219
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ F C +C K F R NLQ+H GH ++ S G +P R
Sbjct: 48 IALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRS--GKEP----RKRV 101
Query: 202 FCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNC 261
+ C ++ V H +R L D ++ H+ RKH K + C KC K AV+ DW+ H K C
Sbjct: 102 YVCPE--KSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC 159
Query: 262 G-RRWHCACGSDFKHKRSLKDHIRAF 286
G R + C CG+ F + S H RAF
Sbjct: 160 GTREYRCDCGTLFSRRDSFITH-RAF 184
>Os02g0518500
Length = 492
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAA 206
+ L+ + C VC K F R NLQ+H GH P L+ + C
Sbjct: 58 KTLLATNRYICEVCHKGFQRDQNLQLHRRGHNL-----PWKLKQRSSTEAKKKVYVCPEI 112
Query: 207 GCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-RRW 265
C + H R L D ++ HY RKH K + C +C K AV+ DW+ H K CG + +
Sbjct: 113 TCPH---HDATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKICGTKEY 169
Query: 266 HCACGSDFKHKRSLKDHIRAF 286
C CG+ F K S H RAF
Sbjct: 170 RCDCGTIFSRKDSFITH-RAF 189
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 155 FACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDH 214
F C +C K F R NLQ+H GH ++ RG++ A ++ C A C V H
Sbjct: 6 FVCEICGKGFQRDQNLQLHRRGHNLPWKL---KQRGSKEAVRKKV-YICPEASC---VHH 58
Query: 215 PRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-RRWHCACGSDF 273
+R L D ++ H+ RKH K + C KC K AV DW+ H K CG R + C CG+ F
Sbjct: 59 DPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIF 118
Query: 274 KHKRSLKDHIRAF 286
+ S H RAF
Sbjct: 119 SRRDSFITH-RAF 130
>Os09g0485500 Similar to T6J4.5 protein (WIP6 protein)
Length = 181
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 132 MGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQM 172
+G+L KG+YWIPTP+QILIGPT F+CPVC KTF+RYNN+Q+
Sbjct: 119 IGRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQV 159
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYR-RGPESLRGTQPAAMLRLPCFCC- 204
+ L+ F C +C K F R NLQ+H GH ++ R G R + C
Sbjct: 73 RTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGGAGGGGGGEPPRKRVYVCP 132
Query: 205 AAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-R 263
A C V H +R L D ++ H+ RKH K + C +CGK AV DW+ H K CG R
Sbjct: 133 EASC---VHHSPSRALGDLTGIKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKVCGTR 189
Query: 264 RWHCACGSDFKHKRSLKDHIRAF 286
+ C CG+ F + S H RAF
Sbjct: 190 EYKCDCGTVFSRRDSFVTH-RAF 211
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPC 201
I + L+ F C +C K F R NLQ+H GH P LR + +
Sbjct: 29 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLRQRSGKEVRKRVY 83
Query: 202 FCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNC 261
C C V H +R L D ++ H+ RKH K + C KC K AV+ DW+ H K C
Sbjct: 84 VCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTC 140
Query: 262 G-RRWHCACGSDF 273
G R + C CG+ F
Sbjct: 141 GSREYRCDCGTLF 153
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,572,376
Number of extensions: 438169
Number of successful extensions: 1293
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1256
Number of HSP's successfully gapped: 28
Length of query: 306
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 205
Effective length of database: 11,762,187
Effective search space: 2411248335
Effective search space used: 2411248335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)