Os02g0196100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to T6J4.5 protein (WIP6 protein).
FiT-DB / Search/ Help/ Sample detail
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Os02g0196100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to T6J4.5 protein (WIP6 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.4 | 0.421 | 2.89 | 0.0376 | 0.0794 | 0.723 | 0.0477 | 1.88 | -0.0226 | 13.1 | 5.5 | 1334 | -- | -- |
| 82.03 | 0.422 | 2.85 | 0.0134 | 0.0804 | 0.555 | -0.129 | -- | 0.00571 | 12.6 | 5.542 | 1410 | -- | -- |
| 80.41 | 0.418 | 2.89 | 0.0387 | 0.0791 | 0.723 | -- | 1.86 | -0.0218 | 13.4 | 5.506 | 1334 | -- | -- |
| 81.89 | 0.421 | 2.85 | 0.0198 | 0.0789 | 0.474 | -- | -- | 0.0214 | 13.4 | 5.599 | 1401 | -- | -- |
| 80.73 | 0.418 | 2.89 | 0.0299 | -- | 0.71 | -- | 1.84 | -0.0236 | -- | 5.6 | 1411 | -- | -- |
| 84.05 | 0.43 | 2.86 | -0.125 | 0.0367 | -- | -0.145 | -- | -0.0138 | 16.9 | -- | -- | -- | -- |
| 84.07 | 0.429 | 2.86 | -0.125 | 0.0426 | -- | -- | -- | -0.0144 | 14.4 | -- | -- | -- | -- |
| 82.14 | 0.422 | 2.85 | -0.00938 | -- | 0.434 | -- | -- | 0.0112 | -- | 5.6 | 1417 | -- | -- |
| 81.86 | 0.421 | 2.85 | -- | 0.0682 | 0.466 | -- | -- | 0.0202 | 13.2 | 5.536 | 1410 | -- | -- |
| 84.18 | 0.429 | 2.86 | -0.127 | -- | -- | -- | -- | -0.0155 | -- | -- | -- | -- | -- |
| 84.48 | 0.43 | 2.86 | -- | 0.045 | -- | -- | -- | -0.000514 | 14.5 | -- | -- | -- | -- |
| 82.12 | 0.422 | 2.86 | -- | -- | 0.431 | -- | -- | 0.00469 | -- | 5.506 | 1418 | -- | -- |
| 84.6 | 0.429 | 2.86 | -- | -- | -- | -- | -- | -0.00142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.14 | radiation | 1 | 10 | < th | dose independent | rect. | 7 | 5 |
| 3 | 71.14 | radiation | 1 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 5 | 71.15 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 1 |
| 7 | 71.15 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 9 | 71.33 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 1 |
| 26 | 71.33 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 43 | 71.67 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 1 |
| 44 | 71.67 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 5 |
| 46 | 71.67 | humidity | 80 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 62 | 73.18 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 67 | 73.58 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 70 | 73.67 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 2 |
| 71 | 73.67 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 78 | 73.77 | humidity | 80 | 10 | < th | dose independent | rect. | 3 | 1 |
| 97 | 73.87 | humidity | 80 | 90 | < th | dose dependent | rect. | 22 | 6 |
| 156 | 75.47 | humidity | 80 | 270 | < th | dose dependent | rect. | 20 | 8 |
| 157 | 75.48 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 9 |
| 200 | 76.24 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 212 | 76.44 | humidity | 80 | 30 | < th | dose independent | rect. | 23 | 1 |
| 215 | 76.44 | humidity | 80 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 233 | 76.68 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 1 |
| 259 | 76.85 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 8 |
| 307 | 77.16 | wind | 3 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 371 | 77.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 401 | 78.21 | temperature | 20 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 410 | 78.26 | temperature | 20 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 411 | 78.28 | humidity | 80 | 10 | < th | dose independent | sin | 9 | NA |
| 412 | 78.28 | humidity | 80 | 90 | < th | dose independent | sin | 10 | NA |
| 421 | 78.36 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 9 |
| 435 | 78.48 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 9 |
| 439 | 78.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 448 | 78.62 | wind | 5 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 452 | 78.67 | wind | 5 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 481 | 78.80 | temperature | 20 | 720 | < th | dose dependent | rect. | 12 | 8 |
| 486 | 78.83 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 12 |
| 488 | 78.84 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 6 |
| 505 | 78.87 | radiation | 20 | 10 | < th | dose independent | rect. | 12 | 1 |
| 522 | 78.91 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 2 | 1 |
| 539 | 78.96 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 552 | 79.01 | humidity | 80 | 90 | > th | dose independent | sin | 10 | NA |
| 562 | 79.03 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 13 |
| 567 | 79.08 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 5 |
| 588 | 79.15 | wind | 5 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 597 | 79.18 | wind | 5 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 598 | 79.18 | wind | 5 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 601 | 79.19 | wind | 5 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 637 | 79.30 | humidity | 80 | 270 | > th | dose independent | rect. | 21 | 9 |
| 660 | 79.36 | temperature | 20 | 720 | > th | dose independent | sin | 20 | NA |
| 661 | 79.36 | temperature | 20 | 720 | < th | dose independent | sin | 19 | NA |
| 677 | 79.39 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 11 |
| 690 | 79.41 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 693 | 79.43 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 694 | 79.43 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 1 |
| 699 | 79.44 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 700 | 79.44 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 704 | 79.44 | temperature | 20 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 710 | 79.45 | temperature | 20 | 720 | < th | dose dependent | rect. | 22 | 1 |
| 764 | 79.54 | wind | 5 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 793 | 79.58 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 8 | 6 |
| 794 | 79.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 803 | 79.60 | atmosphere | 1010 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 811 | 79.61 | wind | 5 | 1440 | > th | dose independent | sin | 21 | NA |
| 819 | 79.62 | atmosphere | 1010 | 270 | > th | dose independent | rect. | 5 | 1 |
| 829 | 79.62 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 831 | 79.62 | atmosphere | 1010 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 849 | 79.64 | wind | 5 | 1440 | < th | dose independent | sin | 21 | NA |
| 854 | 79.64 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 14 |
| 890 | 79.68 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 910 | 79.68 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 954 | 79.70 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 984 | 79.71 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 22 | 8 |
| 1000 | 79.72 | temperature | 20 | 720 | < th | dose dependent | rect. | 12 | 12 |