Os09g0282300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WIP1 protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os09g0282300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WIP1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.72 | 0.745 | 3.32 | -2.19 | 1.1 | -1.05 | -4.05 | 4.55 | -0.208 | 8.59 | 21.9 | 617 | 2.9 | -- |
| 284.9 | 0.786 | 3.22 | -1.26 | 0.983 | -1.2 | -1.49 | -- | 0.0991 | 8.88 | 19.51 | 653 | 3.47 | -- |
| 284.36 | 0.785 | 3.23 | -1.66 | 0.905 | -0.796 | -- | 2.31 | 0.0929 | 8.29 | 20.5 | 635 | 4.41 | -- |
| 290.19 | 0.793 | 3.22 | -1.29 | 0.966 | -1.18 | -- | -- | 0.125 | 8.94 | 19.7 | 651 | 3.52 | -- |
| 314.92 | 0.827 | 3.31 | -1.82 | -- | -0.572 | -- | 2.59 | 0.0214 | -- | 20.06 | 1601 | 4.43 | -- |
| 312.01 | 0.828 | 3.17 | -0.948 | 0.755 | -- | -1.05 | -- | 0.318 | 8.74 | -- | -- | -- | -- |
| 315.65 | 0.832 | 3.17 | -0.982 | 0.757 | -- | -- | -- | 0.318 | 8.78 | -- | -- | -- | -- |
| 325.76 | 0.841 | 3.24 | -1.43 | -- | -0.864 | -- | -- | 0.0889 | -- | 18.9 | 2958 | 3.84 | -- |
| 326.92 | 0.842 | 3.17 | -- | 0.915 | -0.779 | -- | -- | 0.303 | 8.9 | 20.6 | 591 | 2.56 | -- |
| 348.16 | 0.872 | 3.19 | -0.981 | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
| 341.06 | 0.864 | 3.15 | -- | 0.755 | -- | -- | -- | 0.427 | 8.88 | -- | -- | -- | -- |
| 368.5 | 0.897 | 3.18 | -- | -- | -0.399 | -- | -- | 0.385 | -- | 20.6 | 543 | 4.51 | -- |
| 373.56 | 0.902 | 3.17 | -- | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 2 | 251.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 3 | 251.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 4 | 252.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 18 | 254.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 35 | 255.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 3 |
| 44 | 256.47 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 68 | 258.00 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 9 |
| 72 | 258.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 83 | 258.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 84 | 258.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 87 | 258.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 99 | 258.98 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 125 | 259.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 151 | 260.32 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 8 |
| 169 | 260.81 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 179 | 261.01 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 239 | 262.02 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 256 | 262.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 284 | 262.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 286 | 262.78 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 297 | 262.97 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 350 | 263.66 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 499 | 265.39 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 532 | 265.73 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 533 | 265.75 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 534 | 265.75 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 549 | 265.90 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 594 | 266.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 610 | 266.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 616 | 266.63 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |
| 641 | 266.87 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 663 | 267.01 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 665 | 267.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 673 | 267.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 700 | 267.35 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 21 |
| 724 | 267.60 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 736 | 267.64 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 741 | 267.65 | radiation | 40 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 802 | 268.08 | radiation | 40 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 806 | 268.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 809 | 268.11 | radiation | 40 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 849 | 268.34 | radiation | 40 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 851 | 268.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 869 | 268.42 | radiation | 40 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 870 | 268.42 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 13 |
| 872 | 268.44 | radiation | 40 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 898 | 268.58 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 902 | 268.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 906 | 268.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 907 | 268.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 920 | 268.70 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 924 | 268.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 928 | 268.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 936 | 268.83 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 944 | 268.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 946 | 268.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 948 | 268.87 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 950 | 268.88 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 952 | 268.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 957 | 268.91 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 966 | 268.95 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |