Os01g0859100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WIP1 protein (Fragment).
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Os01g0859100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WIP1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 247.5 | 0.739 | 6.25 | 4.08 | 0.456 | -0.964 | -0.0847 | -0.146 | -0.12 | 10.8 | 24.84 | 7306 | -- | -- |
| 247.49 | 0.733 | 6.24 | 4.13 | 0.452 | -0.994 | -0.09 | -- | -0.0936 | 10.9 | 24.6 | 7373 | -- | -- |
| 247.49 | 0.733 | 6.25 | 4.04 | 0.456 | -0.967 | -- | -0.263 | -0.124 | 10.8 | 24.75 | 7385 | -- | -- |
| 247.53 | 0.733 | 6.24 | 4.13 | 0.455 | -0.991 | -- | -- | -0.0948 | 10.8 | 24.61 | 7371 | -- | -- |
| 257.57 | 0.747 | 6.24 | 4.09 | -- | -1.07 | -- | -0.15 | -0.0434 | -- | 24.69 | 8087 | -- | -- |
| 288.32 | 0.796 | 6.3 | 3.72 | 0.477 | -- | -0.00755 | -- | -0.385 | 11 | -- | -- | -- | -- |
| 288.32 | 0.795 | 6.3 | 3.72 | 0.477 | -- | -- | -- | -0.385 | 11 | -- | -- | -- | -- |
| 257.59 | 0.748 | 6.23 | 4.14 | -- | -1.08 | -- | -- | -0.0289 | -- | 24.68 | 8090 | -- | -- |
| 631.15 | 1.17 | 6.44 | -- | 0.424 | 0.906 | -- | -- | -0.918 | 11.3 | 14 | 4454 | -- | -- |
| 302.51 | 0.813 | 6.32 | 3.71 | -- | -- | -- | -- | -0.389 | -- | -- | -- | -- | -- |
| 652.21 | 1.19 | 6.4 | -- | 0.45 | -- | -- | -- | -0.799 | 10.4 | -- | -- | -- | -- |
| 470.51 | 1.01 | 6.56 | -- | -- | 2.24 | -- | -- | -1.47 | -- | -0.8022 | 47520 | -- | -- |
| 664.61 | 1.2 | 6.41 | -- | -- | -- | -- | -- | -0.8 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 2 | 245.79 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 3 | 245.89 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 5 | 246.13 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 9 | 246.20 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 11 | 246.22 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 37 | 246.74 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 49 | 246.75 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 59 | 246.81 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 80 | 247.02 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 96 | 247.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 115 | 247.72 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 171 | 248.47 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 176 | 248.51 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 179 | 248.52 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 183 | 248.57 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 199 | 248.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 206 | 248.95 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 223 | 249.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 226 | 249.26 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 238 | 249.34 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 262 | 249.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 279 | 249.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 289 | 249.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 292 | 249.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 293 | 249.43 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 295 | 249.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 316 | 249.59 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 317 | 249.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 320 | 249.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 330 | 249.62 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 425 | 249.86 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 447 | 249.90 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 451 | 249.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 453 | 249.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 470 | 250.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 471 | 250.04 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 474 | 250.06 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 476 | 250.07 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 483 | 250.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 485 | 250.12 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 496 | 250.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 497 | 250.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 498 | 250.25 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 575 | 250.46 | temperature | 30.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 576 | 250.46 | temperature | 30.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 587 | 250.50 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 631 | 250.74 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 639 | 250.77 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 641 | 250.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 643 | 250.78 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 650 | 250.82 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 651 | 250.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 653 | 250.84 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 763 | 250.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 778 | 250.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 19 |
| 782 | 250.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 814 | 250.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 815 | 250.88 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 831 | 250.89 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 900 | 250.93 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 935 | 250.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 948 | 251.04 | wind | 5.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 962 | 251.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 976 | 251.08 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 983 | 251.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 7 |