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Os08g0554400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, C2H2-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.023) R2 : 0.0291
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.179 (0.0484) R2dN8 : 0.0376 R2N8 : 0.0291
σ : 0.433
deviance : 86.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.35 0.383 11.9 0.0161 0.126 -0.877 0.842 -1.56 -0.0495 19 1.318 4298 -- --
69.65 0.389 11.9 0.343 0.121 -0.864 0.868 -- -0.0231 18.8 1.53 4286 -- --
68.15 0.384 11.9 0.029 0.123 -0.865 -- -1.48 -0.05 19.8 1.32 4300 -- --
70.04 0.39 11.9 0.321 0.126 -0.933 -- -- -0.00866 18.8 1.57 8601 -- --
68.85 0.386 11.9 -0.00506 -- -0.853 -- -1.48 -0.0381 -- 1.425 4320 -- --
82.54 0.426 11.9 0.184 0.125 -- 0.898 -- -0.16 18.2 -- -- -- --
84.53 0.431 11.9 0.174 0.13 -- -- -- -0.157 18.3 -- -- -- --
70.41 0.391 11.9 0.305 -- -0.962 -- -- 0.0584 -- 1.565 8598 -- --
71.85 0.395 11.9 -- 0.101 -0.952 -- -- 0.0499 19.1 1.723 8614 -- --
85.4 0.432 11.9 0.171 -- -- -- -- -0.16 -- -- -- -- --
85.33 0.432 11.9 -- 0.127 -- -- -- -0.177 18.3 -- -- -- --
72.26 0.396 11.8 -- -- -0.833 -- -- 0.0458 -- 2.272 8616 -- --
86.17 0.433 11.9 -- -- -- -- -- -0.179 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.18 temperature 25 720 > th dose dependent rect. 20 3
22 62.17 temperature 25 720 > th dose dependent rect. 18 13
27 62.28 radiation 30 1440 < th dose dependent rect. 18 7
47 62.71 temperature 25 720 > th dose independent rect. 18 6
48 62.71 radiation 40 4320 < th dose dependent rect. 18 9
54 62.82 temperature 25 720 < th dose independent rect. 19 5
75 63.17 temperature 15 270 > th dose dependent rect. 20 9
85 63.33 temperature 30 720 < th dose dependent rect. 18 7
86 63.34 wind 7 43200 > th dose independent rect. 10 1
89 63.42 wind 7 43200 < th dose independent rect. 10 1
103 63.58 wind 3 43200 > th dose dependent rect. 5 1
108 63.66 wind 3 43200 > th dose independent rect. 3 1
109 63.67 wind 3 43200 < th dose independent rect. 3 1
110 63.67 humidity 90 43200 > th dose dependent rect. 9 1
121 63.81 humidity 90 14400 < th dose independent rect. 21 6
136 63.94 humidity 90 43200 > th dose independent rect. 8 2
137 63.95 wind 5 43200 > th dose dependent rect. 10 2
147 64.04 wind 7 43200 < th dose independent rect. 3 10
150 64.05 wind 7 43200 < th dose independent rect. 9 3
151 64.05 radiation 30 14400 < th dose independent rect. 15 17
157 64.06 wind 7 43200 < th dose independent rect. 8 5
158 64.06 wind 1 43200 > th dose dependent rect. 3 1
168 64.09 wind 7 43200 > th dose independent rect. 3 10
169 64.10 wind 7 43200 > th dose independent rect. 8 5
175 64.12 wind 5 43200 < th dose independent rect. 5 1
184 64.14 radiation 20 1440 < th dose dependent rect. 18 2
186 64.15 humidity 90 43200 < th dose independent rect. 8 2
193 64.16 radiation 40 4320 < th dose dependent rect. 17 15
198 64.18 radiation 1 4320 > th dose dependent rect. 17 15
209 64.22 wind 5 43200 < th dose dependent rect. 3 2
215 64.23 wind 3 43200 > th dose dependent rect. 3 11
224 64.25 radiation 30 14400 > th dose dependent rect. 15 17
226 64.26 humidity 90 43200 < th dose independent rect. 8 5
229 64.26 radiation 40 14400 < th dose dependent rect. 18 5
236 64.28 radiation 40 14400 < th dose dependent rect. 18 2
243 64.31 radiation 1 14400 > th dose independent rect. 5 1
247 64.31 wind 9 43200 < th dose dependent rect. 3 1
252 64.32 radiation 1 14400 < th dose independent rect. 5 1
259 64.32 radiation 40 4320 > th dose dependent rect. 13 20
294 64.39 wind 9 43200 < th dose dependent rect. 10 2
295 64.39 radiation 40 4320 > th dose dependent rect. 13 2
302 64.41 humidity 90 14400 < th dose independent sin 11 NA
373 64.50 radiation 1 14400 < th dose independent rect. 5 3
376 64.50 humidity 90 14400 > th dose dependent rect. 22 4
383 64.52 radiation 1 14400 > th dose independent rect. 5 3
397 64.54 humidity 90 14400 < th dose independent rect. 14 17
400 64.55 radiation 20 4320 < th dose independent rect. 6 2
403 64.55 radiation 20 4320 < th dose independent rect. 17 15
408 64.56 radiation 1 14400 < th dose independent rect. 19 13
413 64.57 radiation 1 14400 < th dose independent rect. 24 8
415 64.57 radiation 1 14400 < th dose independent rect. 22 10
417 64.57 radiation 20 4320 < th dose independent rect. 19 13
443 64.58 temperature 25 720 > th dose dependent sin 12 NA
468 64.60 radiation 20 4320 < th dose independent rect. 22 10
477 64.61 radiation 20 4320 < th dose independent rect. 24 8
496 64.63 radiation 20 4320 < th dose independent rect. 2 6
514 64.65 humidity 90 14400 > th dose dependent rect. 24 1
536 64.67 radiation 30 14400 > th dose independent rect. 16 16
577 64.70 temperature 30 270 < th dose dependent rect. 17 16
579 64.71 radiation 30 14400 < th dose independent rect. 15 10
580 64.71 radiation 30 14400 < th dose independent rect. 15 12
591 64.72 radiation 1 720 > th dose dependent rect. 18 1
606 64.73 radiation 30 14400 < th dose independent rect. 15 5
617 64.74 radiation 30 14400 < th dose independent rect. 15 2
620 64.74 humidity 90 14400 > th dose independent rect. 21 6
624 64.74 wind 9 43200 < th dose dependent rect. 3 9
654 64.78 humidity 80 14400 > th dose dependent rect. 22 1
672 64.80 humidity 90 14400 > th dose dependent rect. 21 10
709 64.83 humidity 90 43200 > th dose dependent rect. 8 14
725 64.84 humidity 90 43200 > th dose independent rect. 7 12
754 64.86 radiation 1 4320 < th dose independent rect. 18 7
766 64.86 radiation 20 14400 > th dose dependent rect. 16 15
806 64.88 radiation 1 4320 < th dose independent rect. 18 9
812 64.88 humidity 90 43200 > th dose independent rect. 7 15
816 64.88 radiation 1 4320 > th dose dependent rect. 4 4
830 64.89 radiation 1 14400 < th dose independent sin 8 NA
837 64.89 humidity 90 14400 > th dose independent rect. 21 10
846 64.89 radiation 30 14400 > th dose dependent rect. 15 1
859 64.90 humidity 90 14400 < th dose independent rect. 21 18
887 64.92 radiation 1 14400 > th dose independent sin 8 NA
897 64.92 radiation 40 4320 < th dose dependent rect. 22 10
908 64.93 radiation 40 4320 < th dose dependent rect. 5 3
912 64.94 humidity 70 14400 > th dose independent rect. 19 1
923 64.94 radiation 40 4320 < th dose dependent rect. 24 8
934 64.95 radiation 40 4320 < th dose dependent rect. 2 6
967 64.98 humidity 90 43200 < th dose independent rect. 7 12
968 64.98 humidity 90 43200 < th dose independent rect. 7 14
974 64.99 radiation 30 14400 > th dose independent rect. 7 1
981 64.99 radiation 1 4320 < th dose independent rect. 18 5