BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0554400 Os08g0554400|AK072128
(548 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0554400 Zinc finger, C2H2-type domain containing protein 657 0.0
AK067268 396 e-110
Os09g0555700 Zinc finger, C2H2-type domain containing protein 365 e-101
Os02g0672100 Zinc finger, C2H2-type domain containing protein 322 3e-88
Os01g0242200 Zinc finger, C2H2-type domain containing protein 318 7e-87
Os01g0195000 Zinc finger, C2H2-type domain containing protein 316 3e-86
Os04g0566400 Zinc finger, C2H2-type domain containing protein 313 2e-85
Os02g0518500 305 7e-83
Os01g0935000 Zinc finger, C2H2-type domain containing protein 296 4e-80
Os10g0419200 Zinc finger, C2H2-type domain containing protein 290 1e-78
Os03g0197700 Zinc finger, C2H2-type domain containing protein 264 1e-70
Os01g0572300 Zinc finger, C2H2-type domain containing protein 263 3e-70
Os03g0237250 Zinc finger, C2H2-type domain containing protein 199 5e-51
Os09g0449400 Zinc finger, C2H2-type domain containing protein 197 2e-50
Os01g0871200 Zinc finger, C2H2-type domain containing protein 99 1e-20
Os04g0165200 Zinc finger, C2H2-type domain containing protein 97 2e-20
Os03g0838800 Zinc finger, C2H2-type domain containing protein 97 2e-20
Os08g0562300 Zinc finger, C2H2-type domain containing protein 96 9e-20
Os12g0170400 Zinc finger, C2H2-type domain containing protein 95 1e-19
Os01g0859100 Similar to WIP1 protein (Fragment) 94 4e-19
Os02g0572900 Zinc finger, C2H2-type domain containing protein 93 4e-19
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 92 9e-19
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 91 3e-18
Os09g0307400 89 8e-18
Os09g0282300 Similar to WIP1 protein (Fragment) 88 2e-17
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 87 3e-17
Os08g0504000 Similar to WIP5 protein 67 4e-11
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/548 (63%), Positives = 346/548 (63%)
Query: 1 MAAASSAHYFGLGEXXXXXXXXXXXXXXXXXXXXXXXXXXKKKRNQPGNPNPDAEVVALS 60
MAAASSAHYFGLGE KKKRNQPGNPNPDAEVVALS
Sbjct: 1 MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKRNQPGNPNPDAEVVALS 60
Query: 61 PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH 120
PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH
Sbjct: 61 PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH 120
Query: 121 HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL 180
HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL
Sbjct: 121 HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL 180
Query: 181 FSRRDSFITHRAFCDALAQESGRIMPPXXXXXXXXXXXXXXXXXXXXXXXSHQLQPFQDH 240
FSRRDSFITHRAFCDALAQESGRIMPP SHQLQPFQDH
Sbjct: 181 FSRRDSFITHRAFCDALAQESGRIMPPMGAALYAAAGAGMAIGGLTGMAASHQLQPFQDH 240
Query: 241 SSXXXXXXXXXXQFDHLMATXXXXXXXXXXXXXQPTSSSSSPFYLGGGGDDGQAHTSLLH 300
SS QFDHLMAT QPTSSSSSPFYLGGGGDDGQAHTSLLH
Sbjct: 241 SSAITTAANAAAQFDHLMATSSAAAGSPAFRAAQPTSSSSSPFYLGGGGDDGQAHTSLLH 300
Query: 301 GKPAFHGLMQLPEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVFPDQFNXXXXXXXXX 360
GKPAFHGLMQLPEQQ RLVFPDQFN
Sbjct: 301 GKPAFHGLMQLPEQQGSNGGGLLNLSYFSGGNGGHHHHHQEGRLVFPDQFNGVAAGNGAR 360
Query: 361 XXXXEHGNSGNNADXXXXXXXXXXXXXXXXXXXXXXXDQTVPPPQMSATALLQKAAQMXX 420
EHGNSGNNAD DQTVPPPQMSATALLQKAAQM
Sbjct: 361 AGSGEHGNSGNNADSGSIFSGNMMGGGGGFSSLYSSSDQTVPPPQMSATALLQKAAQMGA 420
Query: 421 XXXXXXXXXVNSXXXXXXXXXXXXXXXXXXXXXXXFIMSGESSSRSTASQTAENESQLRE 480
VNS FIMSGESSSRSTASQTAENESQLRE
Sbjct: 421 TTSSGGAGSVNSLLRGLGSGGGGGALNGKPAGAAGFIMSGESSSRSTASQTAENESQLRE 480
Query: 481 LMMNTLSXXXXXXXXXXXXXXXXXXXXXXXKLSTRDFLGVSGGAPGLQLRHXXXXXXXXX 540
LMMNTLS KLSTRDFLGVSGGAPGLQLRH
Sbjct: 481 LMMNTLSATGGGTGAGTVFVGGGFPGVDDGKLSTRDFLGVSGGAPGLQLRHGGAAGMGMA 540
Query: 541 XSLDQEMK 548
SLDQEMK
Sbjct: 541 GSLDQEMK 548
>AK067268
Length = 324
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/242 (79%), Positives = 193/242 (79%)
Query: 1 MAAASSAHYFGLGEXXXXXXXXXXXXXXXXXXXXXXXXXXKKKRNQPGNPNPDAEVVALS 60
MAAASSAHYFGLGE KKKRNQPGNPNPDAEVVALS
Sbjct: 1 MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKRNQPGNPNPDAEVVALS 60
Query: 61 PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH 120
PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH
Sbjct: 61 PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH 120
Query: 121 HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL 180
HDPSRALG+LTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL
Sbjct: 121 HDPSRALGNLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL 180
Query: 181 FSRRDSFITHRAFCDALAQESGRIMPPXXXXXXXXXXXXXXXXXXXXXXXSHQLQPFQDH 240
FSRRDSFITHRAFCDALAQESGRIMPP SHQLQPFQDH
Sbjct: 181 FSRRDSFITHRAFCDALAQESGRIMPPMGAALYAAAGAGMAIGGLTGMAASHQLQPFQDH 240
Query: 241 SS 242
SS
Sbjct: 241 SS 242
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 219/346 (63%), Gaps = 42/346 (12%)
Query: 1 MAAASSAHYFGLGEXXX------XXXXXXXXXXXXXXXXXXXXXXXKKKRNQPGNPNPDA 54
MAAASSA +FGLG+ KKKRNQPGNPNPDA
Sbjct: 1 MAAASSAPFFGLGDTQMPPPQNPTNPALHHHPNPSPAPVAAAAPAPKKKRNQPGNPNPDA 60
Query: 55 EVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCP 114
EV+ALSP TL+ATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE RRRVYLCP
Sbjct: 61 EVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCP 120
Query: 115 EPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
EPSCVHHDPSRALGDLTGIKKHY RKHGEKKW+CDKC+KRYAVQSDWKAHSKTCGTREYR
Sbjct: 121 EPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTREYR 180
Query: 175 CDCGTLFSRRDSFITHRAFCDALAQESGRIMPPXXXXXXXXXXXXXXXXXXXXXXXSHQL 234
CDCGTLFSRRDSFITHRAFCDALAQE+ R MPP + QL
Sbjct: 181 CDCGTLFSRRDSFITHRAFCDALAQENAR-MPP---IGAGVYGGAGNMTLGLTGMAAPQL 236
Query: 235 QP-FQDHSSXXXXXX----------XXXXQFDHLMATXXXXXXXXXXXXXQPTSSSSSPF 283
F D + QFDHLMA+ + SSSS F
Sbjct: 237 PAGFPDQAGQPSASAGDVLRLGGGSNGASQFDHLMAS------SSGSSMFRSQGSSSSSF 290
Query: 284 YLGGGG-----------DDGQAHT---SLLHGKP-AFHGLMQLPEQ 314
YL G +DGQ+ SLLHGKP AFH LMQLP Q
Sbjct: 291 YLANGAAHHAPAQDFGPEDGQSQAGQGSLLHGKPAAFHDLMQLPVQ 336
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 147/167 (88%), Positives = 154/167 (92%), Gaps = 4/167 (2%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KKKR P +PDAEV+ALSP TLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ
Sbjct: 69 KKKRTLP---DPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 125
Query: 101 KNPKET-RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQS 159
KNP + RRRVYLCPEP+CVHHDPSRALGDLTGIKKH+ RKHGEKKWKCDKC+KRYAVQS
Sbjct: 126 KNPLQAQRRRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQS 185
Query: 160 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRIMP 206
DWKAHSK CGTREYRCDCGTLFSRRDSFITHRAFCDALAQES R+ P
Sbjct: 186 DWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPP 232
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 138/164 (84%), Positives = 155/164 (94%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KKKRN PG P+P+AEV+ALSP TL+ATNRFVCE+C KGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGTPDPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 101 KNPKETRRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSD 160
++ KE R+RVY+CPE SCVHH+PSRALGDLTGIKKH+ RKHGEKKWKCDKC+KRYAVQSD
Sbjct: 92 RSGKEPRKRVYVCPEKSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSD 151
Query: 161 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRI 204
WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA+E+ R+
Sbjct: 152 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARL 195
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 137/162 (84%), Positives = 153/162 (94%), Gaps = 1/162 (0%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KKKR+ PGNP+P+AEV+ALSP TL+ATNR+VCE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 45 KKKRSLPGNPDPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 104
Query: 101 KNPKET-RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQS 159
+NPKE R++VY+CPE CVHHDP+RALGDLTGIKKH+SRKHGEKKWKCDKC+KRYAV S
Sbjct: 105 RNPKEVVRKKVYVCPEAGCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHS 164
Query: 160 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQES 201
DWKAHSK CGTREYRCDCGTLFSRRDSFITHRAFCDALA+ES
Sbjct: 165 DWKAHSKVCGTREYRCDCGTLFSRRDSFITHRAFCDALAEES 206
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 144/164 (87%), Positives = 152/164 (92%), Gaps = 3/164 (1%)
Query: 44 RNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNP 103
RN P +P DAEV+ALSP TLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNP
Sbjct: 73 RNLPADP--DAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNP 130
Query: 104 KET-RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWK 162
+ RRRVYLCPEP+CVHHDP+RALGDLTGIKKH+ RKHGEKKWKCDKC+KRYAVQSDWK
Sbjct: 131 AQAQRRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWK 190
Query: 163 AHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRIMP 206
AHSK CGTREYRCDCGTLFSRRDSFITHRAFCDALAQES R+ P
Sbjct: 191 AHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESSRLPP 234
>Os02g0518500
Length = 492
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 152/164 (92%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KK+R PGNP+PD EVVALSP TLLATNR++CEVC+KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 37 KKRRGHPGNPDPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQ 96
Query: 101 KNPKETRRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSD 160
++ E +++VY+CPE +C HHD +RALGDLTGIKKHYSRKHGEKKWKCD+C+K+YAVQSD
Sbjct: 97 RSSTEAKKKVYVCPEITCPHHDATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSD 156
Query: 161 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRI 204
WKAH+K CGT+EYRCDCGT+FSR+DSFITHRAFCDALA+++ R+
Sbjct: 157 WKAHTKICGTKEYRCDCGTIFSRKDSFITHRAFCDALAEDTSRV 200
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 132/174 (75%), Positives = 148/174 (85%), Gaps = 7/174 (4%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KKKR+ PG P+P AEVVALSP TLLATNRFVCE+C KGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 52 KKKRSLPGTPDPSAEVVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQ 111
Query: 101 KNPKET-------RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNK 153
+ R+RVY+CPE SCVHH PSRALGDLTGIKKH+ RKHGEKKWKCD+C K
Sbjct: 112 RGGAGGGGGGEPPRKRVYVCPEASCVHHSPSRALGDLTGIKKHFCRKHGEKKWKCDRCGK 171
Query: 154 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRIMPP 207
RYAV SDWKAHSK CGTREY+CDCGT+FSRRDSF+THRAFCDALAQE+ ++ P
Sbjct: 172 RYAVHSDWKAHSKVCGTREYKCDCGTVFSRRDSFVTHRAFCDALAQENNKLAQP 225
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 127/174 (72%), Positives = 150/174 (86%), Gaps = 9/174 (5%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
KKKR+ PGNP+P+AEV+ALSP L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+
Sbjct: 10 KKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRH 69
Query: 101 KNPKET---------RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKC 151
+ + R+RVY+CPEP+CVHHDP+RALGDLTGIKKH+SRKHGEK+W+C++C
Sbjct: 70 RAAAVSAVTTAAPAPRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
Query: 152 NKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRIM 205
KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCDALA+ES R++
Sbjct: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCDALAEESARLL 183
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 115/136 (84%), Positives = 130/136 (95%)
Query: 48 GNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETR 107
G +PDAEV+ALSP TLLATNRFVCE+CNKGFQR+QNLQLHRRGHNLPWKL+Q++ KE R
Sbjct: 20 GGADPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVR 79
Query: 108 RRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKT 167
+RVY+CPEP+CVHHDPSRALGDLTGIKKH+ RKHGEKKWKCDKC+K+YAVQSDWKAH+KT
Sbjct: 80 KRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT 139
Query: 168 CGTREYRCDCGTLFSR 183
CG+REYRCDCGTLFSR
Sbjct: 140 CGSREYRCDCGTLFSR 155
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 130/142 (91%), Gaps = 1/142 (0%)
Query: 65 LATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE-TRRRVYLCPEPSCVHHDP 123
+ATNRFVCE+C KGFQR+QNLQLHRRGHNLPWKLKQ+ KE R++VY+CPE SCVHHDP
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDP 60
Query: 124 SRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 183
SRALGDLTGIKKH+ RKHGEKKWKCDKC+K+YAV SDWKAHSK CGTREY+CDCGT+FSR
Sbjct: 61 SRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSR 120
Query: 184 RDSFITHRAFCDALAQESGRIM 205
RDSFITHRAFCDAL +ES + +
Sbjct: 121 RDSFITHRAFCDALTEESAKAI 142
>Os03g0237250 Zinc finger, C2H2-type domain containing protein
Length = 251
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 117/167 (70%), Gaps = 24/167 (14%)
Query: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
K+KR PG P+PDAEVVALSP TLL ++R+VCE+C +GFQREQNLQ+HRR H +PW+L +
Sbjct: 50 KRKRRPPGTPDPDAEVVALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKVPWRLVK 109
Query: 101 K-----------------------NPKETRRRVYLCPEPSCVHHDPSRALGDLTGIKKHY 137
+ R+RV++CPEPSC+HHDP+ ALGDL GIKKH+
Sbjct: 110 RPAAATAAEDGGAAGGGGGAGGGAGGGGARKRVFVCPEPSCLHHDPAHALGDLVGIKKHF 169
Query: 138 SRKH-GEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 183
RKH G ++W C +C K YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 170 RRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 216
>Os09g0449400 Zinc finger, C2H2-type domain containing protein
Length = 164
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Query: 51 NPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKE-TRRR 109
+PDAEVV+LSP TLL ++R+VCE+CN+GFQR+QNLQ+HRR H +PWKL ++ E R+R
Sbjct: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 89
Query: 110 VYLCPEPSCVHHDPSRALGDLTGIKKHYSRKH-GEKKWKCDKCNKRYAVQSDWKAHSKTC 168
V++CPEP+C+HHDPS ALGDL GIKKH+ RKH G ++W C +C+K YAV SD+KAH KTC
Sbjct: 90 VFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 149
Query: 169 GTREYRCDCGTLFSR 183
GTR + CDCG +FSR
Sbjct: 150 GTRGHSCDCGRVFSR 164
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 56 VVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRV----- 110
V+ L +LA + C +C KGF+R+ NL++H RGH +K K ++
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
Query: 111 ---YLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDWKA 163
Y CP C H + L + +K HY R H +K + C +CN K+++V +D K
Sbjct: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Query: 164 HSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
H K CG ++ C CGT FSR+D H A
Sbjct: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 53 DAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPK-------E 105
+ +VV L LLA C+VC KGF+R+ NL++H R H +K
Sbjct: 186 EVDVVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAA 245
Query: 106 TRRRVYLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDW 161
RR Y CP C H +AL + K HY R H K + C +C K++AV SD
Sbjct: 246 ARRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDL 305
Query: 162 KAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
+ H K CG + C CGT FSR+D + H A
Sbjct: 306 RTHEKHCGELRWLCSCGTFFSRKDKLMGHVAL 337
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 50 PNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK----LKQKNPKE 105
P EVV + +LA + C VC KGF+R+ NL++H RGH +K L +
Sbjct: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSP 203
Query: 106 TR----------RRVYLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN 152
+R RR Y CP C H + L T +K HY R H +K + C +CN
Sbjct: 204 SRSPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Query: 153 -KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA 196
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG 308
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 56 VVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGH----------NLPWKLKQKNPKE 105
++ L LLA C+VC KGF+R+ NL++H R H + P KL K E
Sbjct: 190 IIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDE 249
Query: 106 TRR---RVYLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKR-YAVQ 158
T R Y CP+ C H + L + K HY R H K + C++C ++ ++V
Sbjct: 250 TMAAAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVL 309
Query: 159 SDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
SD + H K CG + C CGT FSR+D I H +
Sbjct: 310 SDLRTHEKHCGDHRWLCSCGTSFSRKDKLIGHVSL 344
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 56 VVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK-----------LKQKNPK 104
V+ L +LA + C +C KGF+R+ NL++H RGH +K + +
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274
Query: 105 ETRRRVYLCPEPSCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSD 160
R Y CP C H + L + +K HY R H EK+ C +C KR++V +D
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMAD 334
Query: 161 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
K H K CG + C CGT FSR+D H A
Sbjct: 335 LKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVAL 367
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYL-----CPEPS 117
L+ +F+C VCNK F R N+Q+H GH ++ ++ K T+ L C
Sbjct: 209 ILVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQTLAMLKLPCYCCAAG 268
Query: 118 C---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
C V H +R L D ++ HY RKHG K ++C +C K +AV+ DW+ H K CG R +
Sbjct: 269 CKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTHEKNCGKRWF- 327
Query: 175 CDCGTLFSRRDSFITH-RAF 193
C CG+ F + S H R+F
Sbjct: 328 CACGSDFKHKRSLNDHVRSF 347
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 53 DAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL-------KQKNPKE 105
D +VV L LLA + C++C KGF+R+ NL++H R H +K Q P
Sbjct: 156 DYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPA 215
Query: 106 TRRRVYLCPEPSCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN--KRYAVQSD 160
R + CP C H R L + H+ R H K + C++C KR+AV +D
Sbjct: 216 GREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLAD 275
Query: 161 WKAHSKTCGTR-EYRCDCGTLFSRRDSFITHRAF 193
++H + CG ++RC CGT FSR+D H A
Sbjct: 276 LRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYL--------CP 114
L+ +FVC VCNK F R N+Q+H GH ++ ++ K T+ L C
Sbjct: 204 ILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLKLPCYCC 263
Query: 115 EPSC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTR 171
C V H +R L D ++ HY RKHG K + C +C K +AV+ DW+ H K CG R
Sbjct: 264 AAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHEKNCGKR 323
Query: 172 EYRCDCGTLFSRRDSFITH-RAF 193
+ C CG+ F + S H R+F
Sbjct: 324 WF-CACGSDFKHKRSLNDHVRSF 345
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
L+ +F C VC K F R N+Q+H GH P L+ P R C
Sbjct: 271 ILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAG 330
Query: 118 C---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
C + H +R L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y
Sbjct: 331 CRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY- 389
Query: 175 CDCGTLFSRRDSFITH-RAF 193
C CG+ F + S H RAF
Sbjct: 390 CACGSDFKHKRSLKDHIRAF 409
>Os09g0307400
Length = 385
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 48 GNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKN----- 102
G P + + L+ + +F C VCNK F R N+Q+H GH ++ ++
Sbjct: 166 GGQAPSQYWIPSAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAI 225
Query: 103 -------PKETRRRVYLCPEPSC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN 152
P R C C V H +R L D ++ HY RKHG + + C +C
Sbjct: 226 TVGGAAPPASLMRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG 285
Query: 153 KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH-RAF 193
KR+AV+ DW+ H K CG + + C CG+ F + S H R+F
Sbjct: 286 KRFAVRGDWRTHEKNCG-KLWFCVCGSDFKHKRSLKDHVRSF 326
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
L+ F C VC K F R NLQ+H GH P L+ P R C
Sbjct: 148 ILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAG 207
Query: 118 C---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
C V H +R L D ++ HY RKH K + C KC K AV+ DW+ H K CG R +
Sbjct: 208 CRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG-RRWH 266
Query: 175 CDCGTLFSRRDSFITH-RAF 193
C CG+ F + S H RAF
Sbjct: 267 CACGSDFKHKRSLKDHIRAF 286
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 57 VALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK------LKQKNPKETRRRV 110
+ + L +F C VC K F R NLQ+H GH ++ L+ P R
Sbjct: 47 IPTAAQILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRGAQPTAMLRLP 106
Query: 111 YLCPEPSC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKT 167
C C + H +R L D ++ HY R+HG + + C +C KR+AV+ DW+ H K
Sbjct: 107 CYCCAAGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEKN 166
Query: 168 CGTREYRCDCGTLFSRRDSF 187
CG R +RC CG F + S
Sbjct: 167 CG-RLWRCACGAHFRHKRSL 185
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 85 LQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPSC---VHHDPSRALGDLTGIKKH 136
+Q+H GH P L+ P R C C + H +R L D ++ H
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
Query: 137 YSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH-RAF 193
Y RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F + S H RAF
Sbjct: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKRSLKDHARAF 117
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.130 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,942,085
Number of extensions: 420949
Number of successful extensions: 1342
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1303
Number of HSP's successfully gapped: 28
Length of query: 548
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 442
Effective length of database: 11,501,117
Effective search space: 5083493714
Effective search space used: 5083493714
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)