Os05g0444200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to T6J4.5 protein (WIP6 protein).
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Os05g0444200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to T6J4.5 protein (WIP6 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.97 | 0.842 | 10.2 | 1.14 | 0.82 | 0.279 | -1.04 | 4.57 | -0.258 | 5.24 | 24.3 | 377 | -- | -- |
| 363.92 | 0.895 | 10.1 | 2.68 | 0.657 | 0.621 | 0.629 | -- | 0.132 | 6.77 | 27.3 | 23 | -- | -- |
| 320.93 | 0.834 | 10.2 | 1 | 0.931 | 0.257 | -- | 4.39 | -0.24 | 5.16 | 23.78 | 507 | -- | -- |
| 364.88 | 0.896 | 10.1 | 2.69 | 0.652 | 0.642 | -- | -- | 0.135 | 6.93 | 27.3 | 23 | -- | -- |
| 365.06 | 0.89 | 10.2 | 1.15 | -- | 0.322 | -- | 4.19 | -0.204 | -- | 23.7 | 486 | -- | -- |
| 386.95 | 0.922 | 10.1 | 2.52 | 0.932 | -- | 1.06 | -- | 0.0185 | 5.24 | -- | -- | -- | -- |
| 389.74 | 0.924 | 10.1 | 2.52 | 0.939 | -- | -- | -- | 0.0136 | 5.25 | -- | -- | -- | -- |
| 377.88 | 0.905 | 10.1 | 2.77 | -- | 0.867 | -- | -- | 0.175 | -- | 27.3 | 166 | -- | -- |
| 549.75 | 1.09 | 10.1 | -- | 0.87 | 0.36 | -- | -- | -0.184 | 5.55 | 29.3 | 11 | -- | -- |
| 435.83 | 0.976 | 10.1 | 2.55 | -- | -- | -- | -- | 0.0372 | -- | -- | -- | -- | -- |
| 557 | 1.1 | 10.2 | -- | 0.983 | -- | -- | -- | -0.267 | 5.15 | -- | -- | -- | -- |
| 579.89 | 1.13 | 10.1 | -- | -- | 0.555 | -- | -- | -0.166 | -- | 27.3 | 166 | -- | -- |
| 607.6 | 1.15 | 10.2 | -- | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 4 | 295.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 7 | 298.94 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 8 | 299.16 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 11 | 299.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 14 | 300.61 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 19 |
| 17 | 300.88 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 26 | 301.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 35 | 302.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 41 | 302.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 45 | 302.77 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 53 | 303.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 54 | 303.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 69 | 303.93 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 75 | 304.47 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 77 | 304.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 86 | 305.07 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 87 | 305.11 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 99 | 305.58 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 103 | 305.67 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 114 | 306.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 115 | 306.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 21 |
| 120 | 306.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 124 | 306.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 126 | 306.46 | wind | 3.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 130 | 306.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 131 | 306.55 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 134 | 306.68 | wind | 3.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 171 | 307.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 173 | 307.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 196 | 307.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 19 |
| 218 | 308.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 244 | 308.72 | wind | 1.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 249 | 308.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 256 | 308.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 268 | 309.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 15 | 16 |
| 270 | 309.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 292 | 309.30 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 306 | 309.45 | wind | 3.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 317 | 309.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 321 | 309.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 343 | 309.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 344 | 309.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 346 | 309.96 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 359 | 310.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 15 |
| 362 | 310.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 373 | 310.26 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 382 | 310.36 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 393 | 310.56 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 408 | 310.69 | wind | 3.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 419 | 310.74 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 421 | 310.75 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 422 | 310.77 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 455 | 310.95 | wind | 3.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 481 | 311.08 | wind | 3.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 500 | 311.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 587 | 311.75 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 594 | 311.78 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 596 | 311.78 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 17 |
| 634 | 312.08 | wind | 3.0 | 14400 | < th | dose independent | no | NA | NA |
| 663 | 312.24 | wind | 3.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 703 | 312.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 711 | 312.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 715 | 312.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 729 | 312.79 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 734 | 312.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 763 | 313.00 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 795 | 313.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 817 | 313.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 834 | 313.50 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 847 | 313.57 | wind | 1.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 854 | 313.64 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 865 | 313.71 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 19 |
| 866 | 313.72 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 875 | 313.76 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 906 | 313.91 | wind | 3.0 | 14400 | > th | dose independent | no | NA | NA |
| 918 | 313.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 925 | 314.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 937 | 314.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 958 | 314.25 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 968 | 314.29 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 977 | 314.37 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 23 |