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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0504000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WIP5 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.84 (0.0208) R2 : 0.00975
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0929 (0.0439) R2dN8 : 0.0126 R2N8 : 0.00975
σ : 0.392
deviance : 70.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.21 0.385 2.86 -0.347 0.11 0.62 -0.00761 -4.72 0.0995 8.17 30.7 15 -- --
69.25 0.391 2.84 -0.0622 0.118 0.157 -0.0204 -- 0.0974 8.17 30.73 26 -- --
67.21 0.382 2.86 -0.347 0.11 0.62 -- -4.72 0.0996 8.17 30.7 14 -- --
69.25 0.39 2.84 -0.0628 0.118 0.157 -- -- 0.0974 8.16 30.7 14 -- --
67.87 0.386 2.87 -0.348 -- 0.619 -- -4.83 0.0997 -- 30.7 14 -- --
69.85 0.392 2.84 -0.0479 0.11 -- -0.0273 -- 0.0869 9.14 -- -- -- --
69.85 0.391 2.84 -0.0488 0.111 -- -- -- 0.0869 9.16 -- -- -- --
70 0.39 2.84 -0.0615 -- 0.145 -- -- 0.098 -- 30.79 7 -- --
69.35 0.39 2.83 -- 0.117 0.151 -- -- 0.104 8.24 30.7 14 -- --
70.56 0.392 2.84 -0.0492 -- -- -- -- 0.0875 -- -- -- -- --
69.91 0.391 2.84 -- 0.11 -- -- -- 0.0923 9.19 -- -- -- --
69.93 0.391 2.84 -- -- 0.172 -- -- 0.105 -- 31.29 6 -- --
70.62 0.392 2.84 -- -- -- -- -- 0.0929 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.08 temperature 25.0 30 > th dose dependent rect. 6 1
3 66.24 radiation 10.0 30 < th dose independent rect. 6 1
4 66.25 atmosphere 1010.0 30 < th dose independent rect. 6 1
5 66.32 wind 1.0 30 > th dose dependent rect. 6 1
6 66.40 humidity 90.0 30 < th dose dependent rect. 6 1
7 66.60 temperature 25.0 30 > th dose independent rect. 6 1
9 66.64 atmosphere 1015.0 30 < th dose dependent rect. 6 1
10 66.65 radiation 1.0 10 > th dose dependent rect. 6 1
11 66.68 radiation 10.0 1440 < th dose dependent rect. 21 1
16 66.71 temperature 10.0 1440 > th dose independent rect. 21 1
19 66.71 temperature 30.0 1440 < th dose independent rect. 21 1
23 66.71 humidity 50.0 1440 > th dose independent rect. 21 1
29 66.71 atmosphere 995.0 1440 > th dose independent rect. 21 1
30 66.71 radiation 1.0 1440 < th dose independent rect. 21 1
50 66.71 temperature 10.0 1440 > th dose independent rect. 22 23
55 66.72 radiation 40.0 14400 < th dose dependent rect. 21 1
56 66.73 temperature 25.0 30 > th dose independent rect. 20 1
58 66.74 radiation 20.0 30 < th dose dependent rect. 6 1
62 66.75 atmosphere 1005.0 30 > th dose dependent rect. 20 1
64 66.76 temperature 20.0 30 > th dose dependent rect. 20 1
67 66.78 wind 3.0 30 > th dose independent rect. 20 1
68 66.78 humidity 80.0 30 > th dose independent rect. 20 1
69 66.78 humidity 90.0 30 < th dose independent rect. 20 1
76 66.80 atmosphere 1005.0 30 > th dose independent rect. 20 1
78 66.81 wind 5.0 30 < th dose independent rect. 20 1
86 66.82 temperature 10.0 30 > th dose independent rect. 20 1
88 66.82 temperature 30.0 30 < th dose independent rect. 20 1
89 66.82 humidity 50.0 30 > th dose independent rect. 20 1
93 66.82 atmosphere 1010.0 30 < th dose independent rect. 20 1
95 66.82 radiation 1.0 30 < th dose independent rect. 20 1
100 66.82 precipitation 0.1 30 < th dose independent rect. 20 1
101 66.82 temperature 10.0 30 > th dose independent rect. 21 23
102 66.82 wind 1.0 30 > th dose dependent rect. 20 1
103 66.82 radiation 1.0 30 < th dose dependent rect. 20 1
108 66.82 precipitation 0.1 30 < th dose dependent rect. 20 1
109 66.83 humidity 50.0 30 > th dose dependent rect. 20 1
113 66.85 wind 9.0 1440 < th dose independent rect. 7 1
114 66.85 temperature 10.0 1440 > th dose independent rect. 7 1
118 66.85 temperature 30.0 1440 < th dose independent rect. 7 1
122 66.85 humidity 50.0 1440 > th dose independent rect. 7 1
127 66.85 atmosphere 995.0 1440 > th dose independent rect. 7 1
128 66.85 atmosphere 1015.0 1440 < th dose independent rect. 7 1
129 66.85 temperature 10.0 1440 > th dose independent rect. 8 23
132 66.85 wind 9.0 30 < th dose dependent rect. 20 1
133 66.86 humidity 90.0 30 < th dose independent rect. 6 1
139 66.92 atmosphere 1005.0 30 > th dose independent rect. 6 1
140 66.94 wind 1.0 30 > th dose independent rect. 6 1
145 66.94 humidity 90.0 30 < th dose dependent rect. 20 1
146 66.95 wind 5.0 30 < th dose independent rect. 6 1
149 66.95 temperature 10.0 30 > th dose independent rect. 6 1
151 66.95 temperature 30.0 30 < th dose independent rect. 6 1
152 66.95 humidity 50.0 30 > th dose independent rect. 6 1
161 66.95 precipitation 0.1 30 < th dose independent rect. 6 1
162 66.95 temperature 10.0 30 > th dose independent rect. 7 23
163 66.95 precipitation 0.1 30 < th dose dependent rect. 6 1
164 66.96 atmosphere 1015.0 30 < th dose dependent rect. 20 1
165 66.98 radiation 1.0 30 > th dose independent rect. 6 1
171 67.07 humidity 50.0 30 > th dose dependent rect. 6 1
172 67.08 wind 9.0 30 < th dose dependent rect. 6 1
175 67.10 temperature 30.0 30 < th dose dependent rect. 20 1
180 67.14 atmosphere 995.0 30 > th dose dependent rect. 6 1
196 67.26 wind 9.0 1440 < th dose independent rect. 21 1
204 67.31 radiation 20.0 30 < th dose independent rect. 11 1
208 67.33 wind 9.0 30 < th dose independent rect. 7 23
228 67.36 radiation 40.0 30 < th dose independent rect. 11 12
232 67.36 temperature 30.0 10 > th dose dependent rect. 17 19
267 67.43 radiation 30.0 90 < th dose dependent rect. 11 2
273 67.46 precipitation 0.1 1440 > th dose independent rect. 12 1
275 67.46 precipitation 0.1 1440 > th dose dependent rect. 12 1
277 67.48 wind 1.0 1440 > th dose independent rect. 17 1
282 67.51 wind 1.0 1440 < th dose independent rect. 17 1
288 67.51 radiation 10.0 90 < th dose dependent rect. 11 1
296 67.54 radiation 40.0 1440 < th dose independent rect. 7 1
299 67.55 wind 9.0 30 < th dose independent rect. 21 23
300 67.55 wind 1.0 1440 < th dose dependent rect. 17 1
301 67.56 radiation 40.0 30 < th dose independent rect. 11 20
317 67.62 temperature 30.0 30 < th dose dependent rect. 6 1
323 67.63 temperature 30.0 10 > th dose independent rect. 17 19
335 67.66 temperature 30.0 10 > th dose dependent rect. 11 1
342 67.68 temperature 30.0 10 > th dose dependent sin 9 NA
360 67.71 temperature 30.0 90 > th dose independent rect. 11 1
401 67.81 radiation 20.0 30 < th dose independent rect. 20 17
403 67.82 temperature 30.0 10 > th dose independent rect. 11 1
553 67.99 temperature 10.0 30 > th dose dependent rect. 20 11
561 68.01 temperature 25.0 10 > th dose dependent rect. 20 11
562 68.02 temperature 30.0 4320 < th dose independent rect. 13 1
576 68.06 radiation 1.0 720 > th dose independent rect. 7 2
598 68.07 radiation 30.0 90 < th dose dependent rect. 19 18
607 68.09 temperature 30.0 4320 > th dose independent rect. 13 1
615 68.10 humidity 60.0 90 < th dose dependent rect. 17 16
618 68.11 humidity 60.0 30 > th dose independent rect. 23 12
638 68.14 temperature 30.0 720 > th dose independent rect. 11 1
659 68.17 wind 7.0 720 < th dose independent rect. 24 7
660 68.17 humidity 70.0 720 > th dose independent rect. 23 10
670 68.19 radiation 40.0 720 < th dose dependent rect. 24 7
685 68.22 radiation 20.0 720 < th dose independent rect. 24 7
686 68.22 wind 1.0 10 > th dose independent rect. 7 13
691 68.22 radiation 40.0 90 < th dose dependent rect. 10 13
692 68.22 radiation 40.0 90 < th dose dependent rect. 10 21
697 68.23 temperature 10.0 720 > th dose independent rect. 12 7
698 68.23 temperature 10.0 720 > th dose independent rect. 24 7
699 68.23 temperature 30.0 720 < th dose independent rect. 24 7
700 68.23 humidity 50.0 720 > th dose independent rect. 24 7
702 68.23 atmosphere 995.0 720 > th dose independent rect. 24 7
703 68.23 atmosphere 1015.0 720 < th dose independent rect. 12 7
704 68.23 radiation 40.0 720 < th dose independent rect. 24 7
705 68.23 temperature 10.0 720 > th dose independent rect. 7 17
706 68.23 temperature 10.0 720 > th dose independent rect. 19 17
707 68.23 atmosphere 995.0 720 > th dose independent rect. 19 17
712 68.24 radiation 20.0 270 < th dose independent rect. 17 20
714 68.24 temperature 10.0 720 > th dose dependent rect. 19 2
718 68.25 temperature 30.0 30 > th dose independent sin 9 NA
723 68.25 temperature 15.0 90 > th dose independent rect. 7 12
729 68.26 precipitation 0.1 270 > th dose independent rect. 8 1
731 68.26 precipitation 0.1 270 > th dose dependent rect. 8 1
757 68.30 temperature 25.0 30 > th dose independent rect. 20 11
766 68.31 radiation 40.0 270 < th dose independent rect. 1 11
772 68.32 radiation 40.0 90 < th dose independent rect. 3 10
773 68.32 temperature 25.0 30 > th dose independent rect. 11 20
797 68.34 humidity 50.0 720 > th dose independent rect. 19 17
810 68.35 temperature 30.0 10 > th dose dependent rect. 11 7
814 68.36 precipitation 0.1 720 < th dose independent rect. 19 2
816 68.36 wind 1.0 720 > th dose independent rect. 9 14
822 68.36 precipitation 0.1 720 < th dose dependent rect. 19 2
825 68.36 radiation 30.0 270 < th dose dependent rect. 17 20
827 68.37 wind 1.0 720 > th dose independent rect. 19 2
828 68.37 wind 7.0 720 < th dose independent rect. 19 2
831 68.37 radiation 40.0 90 < th dose independent rect. 3 12
832 68.37 radiation 40.0 30 < th dose independent rect. 23 12
836 68.37 wind 9.0 720 < th dose independent rect. 19 17
885 68.39 precipitation 0.1 720 < th dose independent rect. 7 2
893 68.39 precipitation 0.1 720 < th dose dependent rect. 7 2
937 68.40 temperature 30.0 10 > th dose dependent no NA NA