BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0504000 Os08g0504000|J033124D22
(156 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57670.1 | chr3:21370936-21373121 FORWARD LENGTH=384 244 2e-65
AT3G20880.1 | chr3:7313759-7315792 REVERSE LENGTH=413 240 2e-64
AT1G51220.1 | chr1:18989925-18992034 REVERSE LENGTH=338 237 2e-63
AT1G08290.1 | chr1:2610680-2613180 REVERSE LENGTH=338 222 6e-59
AT1G13290.1 | chr1:4550366-4551527 REVERSE LENGTH=303 219 4e-58
AT1G34790.1 | chr1:12763953-12765489 FORWARD LENGTH=304 217 2e-57
AT1G34370.2 | chr1:12551002-12552501 FORWARD LENGTH=500 84 3e-17
AT5G22890.1 | chr5:7653541-7654662 REVERSE LENGTH=374 80 4e-16
AT2G02080.1 | chr2:518328-521170 REVERSE LENGTH=517 72 8e-14
AT5G03150.1 | chr5:745849-748678 FORWARD LENGTH=504 69 1e-12
AT1G55110.1 | chr1:20560406-20562625 REVERSE LENGTH=456 66 6e-12
AT5G66730.1 | chr5:26641914-26643883 REVERSE LENGTH=501 66 8e-12
AT2G02070.1 | chr2:505523-509154 FORWARD LENGTH=603 65 1e-11
AT1G14580.1 | chr1:4990070-4992442 FORWARD LENGTH=468 65 1e-11
AT3G45260.1 | chr3:16596850-16598550 REVERSE LENGTH=447 64 4e-11
AT5G44160.1 | chr5:17773091-17775513 FORWARD LENGTH=467 63 8e-11
AT5G60470.1 | chr5:24320614-24322790 FORWARD LENGTH=451 62 1e-10
AT3G50700.1 | chr3:18840945-18842829 FORWARD LENGTH=453 62 2e-10
AT1G03840.1 | chr1:967596-970058 REVERSE LENGTH=507 61 3e-10
AT4G02670.1 | chr4:1176190-1178489 REVERSE LENGTH=403 60 3e-10
AT3G13810.2 | chr3:4544956-4547300 FORWARD LENGTH=515 60 4e-10
AT1G25250.1 | chr1:8849549-8851520 FORWARD LENGTH=363 48 2e-06
AT1G68130.1 | chr1:25532484-25534317 FORWARD LENGTH=420 47 5e-06
>AT3G57670.1 | chr3:21370936-21373121 FORWARD LENGTH=384
Length = 383
Score = 244 bits (622), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 108/121 (89%), Positives = 116/121 (95%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
MQMHMWGHGSQYRKGPESLRG QPT MLRLPCYCCA GCRNNIDHPRA+PLKDFRTLQTH
Sbjct: 232 MQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTH 291
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGHA 120
YKRKHG+KPF+CRKCGKAFAV+GDWRTHEKNCGKLWYC+CGS+FKHKRSLKDH +AFG+
Sbjct: 292 YKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNG 351
Query: 121 H 121
H
Sbjct: 352 H 352
>AT3G20880.1 | chr3:7313759-7315792 REVERSE LENGTH=413
Length = 412
Score = 240 bits (613), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 107/122 (87%), Positives = 115/122 (94%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
MQMHMWGHGSQYRKGPESLRG QPTAML+LPCYCCA GC+NNIDHPRARPLKDFRTLQTH
Sbjct: 271 MQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTH 330
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGHA 120
YKRKHG++PF CR+CGKAFAVKGDWRTHEKNCGKLWYC CGS+FKHKRSLKDH +AFG+
Sbjct: 331 YKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNG 390
Query: 121 HT 122
H
Sbjct: 391 HV 392
>AT1G51220.1 | chr1:18989925-18992034 REVERSE LENGTH=338
Length = 337
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 112/122 (91%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
MQMHMWGHGSQYRKGPESLRG QPT MLRLPC+CCA GC+NNIDHPRA+PLKDFRTLQTH
Sbjct: 193 MQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTH 252
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGHA 120
YKRKHG KPF CR CGKAFAVKGDWRTHEKNCGKLWYC CGS+FKHKRSLKDH +AFG+
Sbjct: 253 YKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNG 312
Query: 121 HT 122
H
Sbjct: 313 HV 314
>AT1G08290.1 | chr1:2610680-2613180 REVERSE LENGTH=338
Length = 337
Score = 222 bits (565), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 98/123 (79%), Positives = 111/123 (90%), Gaps = 1/123 (0%)
Query: 1 MQMHMWGHGSQYRKGPESLRG-VQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQT 59
MQMHMWGHGS++RKG +SL+G +QP A+LRLPCYCCA GC+NNI+HPR++PLKDFRTLQT
Sbjct: 195 MQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQT 254
Query: 60 HYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGH 119
HYKRKHG KPF C KCGKA AVKGDWRTHEKNCGKLWYC CGS+FKHKRSLKDH R+FG
Sbjct: 255 HYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGS 314
Query: 120 AHT 122
H+
Sbjct: 315 GHS 317
>AT1G13290.1 | chr1:4550366-4551527 REVERSE LENGTH=303
Length = 302
Score = 219 bits (558), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 111/123 (90%), Gaps = 2/123 (1%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTA-MLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQT 59
MQMHMWGHGSQYRKGPESLRG + ++ +LRLPCYCCA GC+NNIDHPR++PLKDFRTLQT
Sbjct: 116 MQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQT 175
Query: 60 HYKRKHGLKPFLCR-KCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFG 118
HYKRKHG KPF CR KC K FAV+GDWRTHEKNCGKLW+C+CGS+FKHKRSLKDH RAFG
Sbjct: 176 HYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFG 235
Query: 119 HAH 121
H
Sbjct: 236 DGH 238
>AT1G34790.1 | chr1:12763953-12765489 FORWARD LENGTH=304
Length = 303
Score = 217 bits (552), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 106/121 (87%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+QMHMWGHGSQYRKGPESL+G QP AML +PCYCC GCRN+IDHPR++PLKDFRTLQTH
Sbjct: 160 LQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTH 219
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGHA 120
YKRKHG KPF CR CGK AVKGDWRTHEKNCGK W C+CGS+FKHKRSLKDH +AFG
Sbjct: 220 YKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSG 279
Query: 121 H 121
H
Sbjct: 280 H 280
>AT1G34370.2 | chr1:12551002-12552501 FORWARD LENGTH=500
Length = 499
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 1 MQMHMWGHGSQYRKGP-------ESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKD 53
++MHM GHG +Y+ ES+ G +P + R C GC+ N +H + +PLK
Sbjct: 259 LRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFL--GCKRNKEHKKFQPLKT 316
Query: 54 FRTLQTHYKRKHGLKPFLCRKC-GKAFAVKGDWRTHEKNCGK-LWYCLCGSEFKHKRSLK 111
++ HYKR H K F C +C K F+V D +THEK+CGK W C CG+ F K L
Sbjct: 317 ILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLF 376
Query: 112 DHARAF-GHA 120
H F GH
Sbjct: 377 GHIALFQGHT 386
>AT5G22890.1 | chr5:7653541-7654662 REVERSE LENGTH=374
Length = 373
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAM-------LRLPCYCCAA-GCRNNIDHPRARPLK 52
++MHM HG +Y K E+L + PT+ L+ Y C GCR N H + +PLK
Sbjct: 232 LRMHMRAHGDEY-KTREAL--ISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLK 288
Query: 53 DFRTLQTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGKL-WYCLCGSEFKHKRSL 110
+ HYKR H K ++CR+C K F+V D RTHEK+CG + W C CG++F K L
Sbjct: 289 SVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKL 348
Query: 111 KDHARAF-GHA 120
H F GH
Sbjct: 349 MSHVSLFLGHV 359
>AT2G02080.1 | chr2:518328-521170 REVERSE LENGTH=517
Length = 516
Score = 72.4 bits (176), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ +S + V+ L C C + H +R L D ++ H
Sbjct: 98 LQLHRRGHNLPWKLKQKSTKEVKRKVYL-----CPEPTC---VHHDPSRALGDLTGIKKH 149
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAFGH 119
Y RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 150 YYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRRDSYITH-RAFCD 208
Query: 120 A 120
A
Sbjct: 209 A 209
>AT5G03150.1 | chr5:745849-748678 FORWARD LENGTH=504
Length = 503
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ S + V + P C + H +R L D ++ H
Sbjct: 97 LQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTC-------VHHDASRALGDLTGIKKH 149
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKRSLKDHARAFGH 119
Y RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F K S H RAF
Sbjct: 150 YSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITH-RAFCD 208
Query: 120 AHT 122
A T
Sbjct: 209 ALT 211
>AT1G55110.1 | chr1:20560406-20562625 REVERSE LENGTH=456
Length = 455
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAA-GCRNNIDHPRARPLKDFRTLQT 59
+Q+H GH ++ S + V +R Y C GC + H +R L D ++
Sbjct: 107 LQLHKRGHNLPWKLKQRSNKDV-----VRKKVYVCPEPGC---VHHHPSRALGDLTGIKK 158
Query: 60 HYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
H+ RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 159 HFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSRRDSFITH-RAF 216
>AT5G66730.1 | chr5:26641914-26643883 REVERSE LENGTH=501
Length = 500
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCC-AAGCRNNIDHPRARPLKDFRTLQT 59
+Q+H GH ++ LR + T +R Y C +GC + H +R L D ++
Sbjct: 76 LQLHRRGHNLPWK-----LRQ-RSTKEVRKKVYVCPVSGC---VHHDPSRALGDLTGIKK 126
Query: 60 HYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
H+ RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 127 HFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITH-RAF 184
>AT2G02070.1 | chr2:505523-509154 FORWARD LENGTH=603
Length = 602
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ +S + V+ L C C + H +R L D ++ H
Sbjct: 96 LQLHRRGHNLPWKLKQKSTKEVKRKVYL-----CPEPSC---VHHDPSRALGDLTGIKKH 147
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
Y RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 148 YYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITH-RAF 204
>AT1G14580.1 | chr1:4990070-4992442 FORWARD LENGTH=468
Length = 467
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ +S + V+ L C C + H AR L D ++ H
Sbjct: 97 LQLHRRGHNLPWKLKQKSNKEVRRKVYL-----CPEPSC---VHHDPARALGDLTGIKKH 148
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
Y RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 149 YYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRRDSYITH-RAF 205
>AT3G45260.1 | chr3:16596850-16598550 REVERSE LENGTH=447
Length = 446
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH P L+ ++ Y C + + H AR L D ++ H
Sbjct: 83 LQLHRRGHNL-----PWKLKQRTNKEQVKKKVYICPE--KTCVHHDPARALGDLTGIKKH 135
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
+ RKHG K + C KC K +AV DW+ H K CG K + C CG+ F K S H RAF
Sbjct: 136 FSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITH-RAF 192
>AT5G44160.1 | chr5:17773091-17775513 FORWARD LENGTH=467
Length = 466
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ + + V R Y C + + H +R L D ++ H
Sbjct: 81 LQLHRRGHNLPWKLKQRTSKEV------RKRVYVCPE--KTCVHHHSSRALGDLTGIKKH 132
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKRSLKDHARAF 117
+ RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F + S H RAF
Sbjct: 133 FCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITH-RAF 189
>AT5G60470.1 | chr5:24320614-24322790 FORWARD LENGTH=451
Length = 450
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH P L+ ++ Y C ++ + H AR L D ++ H
Sbjct: 79 LQLHKRGHNL-----PWKLKQKTNKNQVKKKVYICPE--KSCVHHDPARALGDLTGIKKH 131
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKRSLKDHARAF 117
+ RKHG K + C KC K +AV DW+ H K CG + C CG+ F K S H R+F
Sbjct: 132 FSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSRKDSFISH-RSF 188
>AT3G50700.1 | chr3:18840945-18842829 FORWARD LENGTH=453
Length = 452
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ +S + V+ + C C + H +R L D ++ H
Sbjct: 78 LQLHRRGHNLPWKLRQKSNKEVKKKVYV-----CPEVSC---VHHDPSRALGDLTGIKKH 129
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
+ RKHG K + C KC K +AV+ DW+ H K CG K + C CG+ F + S H RAF
Sbjct: 130 FCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITH-RAF 186
>AT1G03840.1 | chr1:967596-970058 REVERSE LENGTH=507
Length = 506
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 45 HPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSE 103
HP R L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C CG+
Sbjct: 122 HP-TRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTI 180
Query: 104 FKHKRSLKDHARAF 117
F + S H RAF
Sbjct: 181 FSRRDSFITH-RAF 193
>AT4G02670.1 | chr4:1176190-1178489 REVERSE LENGTH=403
Length = 402
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
+Q+H GH ++ ++ + Q + P CA H +R L D ++ H
Sbjct: 97 LQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCA-------HHHPSRALGDLTGIKKH 149
Query: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKRSLKDHARAF 117
+ RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F K + H RAF
Sbjct: 150 FCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSRKDTFITH-RAF 206
>AT3G13810.2 | chr3:4544956-4547300 FORWARD LENGTH=515
Length = 514
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCC-AAGCRNNIDHPRARPLKDFRTLQT 59
+Q+H GH P L+ ++R Y C A C + H +R L D ++
Sbjct: 115 LQLHRRGHNL-----PWKLKQRSNKEVIRKKVYVCPEASC---VHHDPSRALGDLTGIKK 166
Query: 60 HYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG-KLWYCLCGSEFKHKRSLKDHARAF 117
H+ RKHG K + C KC K +AV+ D + H K CG K + C CG+ F + S H RAF
Sbjct: 167 HFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCDCGTLFSRRDSFITH-RAF 224
>AT1G25250.1 | chr1:8849549-8851520 FORWARD LENGTH=363
Length = 362
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 51 LKDFRTLQTHYKRKHGL-KPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKR 108
L D ++ H++RKH + K ++C +C K +AV+ D++ H K CG + C CG F
Sbjct: 98 LGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCDCGRVFSRVE 157
Query: 109 SLKDH 113
S +H
Sbjct: 158 SFIEH 162
>AT1G68130.1 | chr1:25532484-25534317 FORWARD LENGTH=420
Length = 419
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 51 LKDFRTLQTHYKRKHGL-KPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCGSEFKHKR 108
L D ++ H++RKH K ++C +C K +AV+ D++ H K CG + C CG F
Sbjct: 128 LGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVE 187
Query: 109 SLKDH 113
S +H
Sbjct: 188 SFIEH 192
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.136 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,394,553
Number of extensions: 122840
Number of successful extensions: 380
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 368
Number of HSP's successfully gapped: 24
Length of query: 156
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 66
Effective length of database: 8,639,129
Effective search space: 570182514
Effective search space used: 570182514
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 107 (45.8 bits)