BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0612300 Os06g0612300|AK071104
(445 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 535 e-152
Os09g0282300 Similar to WIP1 protein (Fragment) 311 7e-85
Os01g0859100 Similar to WIP1 protein (Fragment) 284 7e-77
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 283 1e-76
Os09g0307400 278 8e-75
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 261 7e-70
Os08g0504000 Similar to WIP5 protein 245 5e-65
Os09g0485600 Similar to WIP1 protein (Fragment) 240 2e-63
Os04g0165200 Zinc finger, C2H2-type domain containing protein 106 4e-23
Os01g0871200 Zinc finger, C2H2-type domain containing protein 101 1e-21
Os09g0485500 Similar to T6J4.5 protein (WIP6 protein) 96 5e-20
Os03g0838800 Zinc finger, C2H2-type domain containing protein 96 7e-20
Os08g0562300 Zinc finger, C2H2-type domain containing protein 94 1e-19
Os01g0195000 Zinc finger, C2H2-type domain containing protein 92 6e-19
Os12g0170400 Zinc finger, C2H2-type domain containing protein 92 1e-18
Os08g0554400 Zinc finger, C2H2-type domain containing protein 90 3e-18
Os02g0572900 Zinc finger, C2H2-type domain containing protein 89 7e-18
Os09g0555700 Zinc finger, C2H2-type domain containing protein 88 2e-17
AK067268 86 4e-17
Os04g0566400 Zinc finger, C2H2-type domain containing protein 86 4e-17
Os02g0672100 Zinc finger, C2H2-type domain containing protein 86 6e-17
Os02g0518500 86 8e-17
Os10g0419200 Zinc finger, C2H2-type domain containing protein 85 1e-16
Os01g0242200 Zinc finger, C2H2-type domain containing protein 84 3e-16
Os01g0935000 Zinc finger, C2H2-type domain containing protein 80 3e-15
Os01g0572300 Zinc finger, C2H2-type domain containing protein 80 4e-15
Os03g0197700 Zinc finger, C2H2-type domain containing protein 77 2e-14
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/418 (67%), Positives = 283/418 (67%)
Query: 1 MHTHTQDTTTLPLHLSLFITVVCXXXXXXXXXXXXXXXXXELAPYYQSSSMGDPYTNFLR 60
MHTHTQDTTTLPLHLSLFITVVC ELAPYYQSSSMGDPYTNFLR
Sbjct: 1 MHTHTQDTTTLPLHLSLFITVVCLLLHPLCYLLFSFSSYLELAPYYQSSSMGDPYTNFLR 60
Query: 61 GYXXXXXXXXXXXXXXXXXXXXXXYAASFSGLYSSYLHXXXXXXXXXIREAXXXXXXXXX 120
GY YAASFSGLYSSYLH IREA
Sbjct: 61 GYHHHHRSHHPLHFPPPPPPPPPPYAASFSGLYSSYLHPPPPPSSPPIREALPLLSLTPS 120
Query: 121 XXXXXXXXXXXXXXXXXXXXKQGQEKNSHGGGGAASCSNNDDKRESPSXXXXXXXXXXEV 180
KQGQEKNSHGGGGAASCSNNDDKRESPS EV
Sbjct: 121 TTHDDDHHHRRHDQDHHHHHKQGQEKNSHGGGGAASCSNNDDKRESPSAAAAADDQAAEV 180
Query: 181 TVALHIGLPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQVXXXXXXXXXXXXXXXX 240
TVALHIGLPSPSP RMQV
Sbjct: 181 TVALHIGLPSPSPSDAAAAAGNQAAAAAAAEASAAGGGSSRMQVEEEGGEEEDEDEAAAA 240
Query: 241 XXXXXLPLGCASIGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGH 300
LPLGCASIGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGH
Sbjct: 241 AATATLPLGCASIGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGH 300
Query: 301 GSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIK 360
GSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIK
Sbjct: 301 GSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIK 360
Query: 361 PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGHAACGI 418
PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGHAACGI
Sbjct: 361 PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGHAACGI 418
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 138/161 (85%), Positives = 149/161 (92%)
Query: 253 IGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLR 312
+GKLTKG+YWIPTP+QILIGPT F+CPVC KTF+RYNN+QMHMWGHGSQYR+GPESLR
Sbjct: 130 FSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLR 189
Query: 313 GTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFA 372
GTQP AMLRLPC+CCAAGCRNN+DHPRARPLKDFRTLQTHYKRKH KPF CRKCGK A
Sbjct: 190 GTQPAAMLRLPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLA 249
Query: 373 VRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGH 413
VRGDWRTHEKNCG+ W+CACGSDFKHKRSLKDHIRAFGR H
Sbjct: 250 VRGDWRTHEKNCGRRWHCACGSDFKHKRSLKDHIRAFGRDH 290
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 284 bits (727), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 124/158 (78%), Positives = 137/158 (86%)
Query: 256 GKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQ 315
G +YWIPTP+QIL+GP QF C VC KTFNRYNNMQMHMWGHG +YRKGPESL+GTQ
Sbjct: 194 GVAMSSRYWIPTPAQILVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQ 253
Query: 316 PTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRG 375
AML+LPCYCCAAGC+NN+ HPRARPLKDFRTLQTHYKRKHG KPF CR+C K FAV+G
Sbjct: 254 TLAMLKLPCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKG 313
Query: 376 DWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGH 413
DWRTHEKNCGK W+CACGSDFKHKRSL DH+R+FG H
Sbjct: 314 DWRTHEKNCGKRWFCACGSDFKHKRSLNDHVRSFGAHH 351
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 137/155 (88%), Gaps = 3/155 (1%)
Query: 262 QYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTA--- 318
+YWIPTP+QILIGP QF C VC K FNRYNNMQMHMWGHG +YRKGPESL+GTQ TA
Sbjct: 195 RYWIPTPAQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLA 254
Query: 319 MLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWR 378
ML+LPCYCCAAGCRNN+ HPRARPLKDFRTLQTHYKRKHG KPF CR+C K FAV+GDWR
Sbjct: 255 MLKLPCYCCAAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWR 314
Query: 379 THEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGH 413
THEKNCGK W+CACGSDFKHKRSL DH+R+FG GH
Sbjct: 315 THEKNCGKRWFCACGSDFKHKRSLNDHVRSFGGGH 349
>Os09g0307400
Length = 385
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 123/166 (74%), Positives = 140/166 (84%), Gaps = 7/166 (4%)
Query: 256 GKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGT- 314
G QYWIP+ ++IL+G TQFSC VC KTFNR+NNMQMHMWGHGSQYRKG ESLRG
Sbjct: 166 GGQAPSQYWIPSAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAI 225
Query: 315 ------QPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG 368
P +++RLPCYCCA GCRNN++HPRARPLKDFRTLQTHY+RKHG +P+ CR+CG
Sbjct: 226 TVGGAAPPASLMRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG 285
Query: 369 KAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGHA 414
K FAVRGDWRTHEKNCGKLW+C CGSDFKHKRSLKDH+R+FG GHA
Sbjct: 286 KRFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRSFGGGHA 331
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 128/144 (88%), Gaps = 1/144 (0%)
Query: 262 QYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKG-PESLRGTQPTAML 320
QYWIPT +QIL G TQFSCPVC KTFNRYNN+QMHMWGHGSQYR+G +LRG QPTAML
Sbjct: 44 QYWIPTAAQILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRGAQPTAML 103
Query: 321 RLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH 380
RLPCYCCAAGCRN+IDHPRARPLKDFRTLQTHY+R+HG + F CR+C K FAVRGDWRTH
Sbjct: 104 RLPCYCCAAGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKRFAVRGDWRTH 163
Query: 381 EKNCGKLWYCACGSDFKHKRSLKD 404
EKNCG+LW CACG+ F+HKRSL D
Sbjct: 164 EKNCGRLWRCACGAHFRHKRSLND 187
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 111/118 (94%), Positives = 115/118 (97%)
Query: 293 MQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 352
MQMHMWGHGSQYRKGPESLRG QPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH 60
Query: 353 YKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFG 410
YKRKHG+KPF+CRKCGKAFAV+GDWRTHEKNCGKLWYC CGS+FKHKRSLKDH RAFG
Sbjct: 61 YKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFG 118
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 108/116 (93%), Positives = 113/116 (97%)
Query: 294 QMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHY 353
QMHMWGHGSQYRKGPESLRG QPTAMLRLPCYCCAAGCRNNIDHPRA+PLKDFRTLQTHY
Sbjct: 1 QMHMWGHGSQYRKGPESLRGIQPTAMLRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQTHY 60
Query: 354 KRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAF 409
KRKHG+KPF+CRKCGKAFAV+GDWRTHEKNCGKLWYC CGS+FKHKRSLKDH RAF
Sbjct: 61 KRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWYCLCGSEFKHKRSLKDHARAF 116
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPE-SLRGTQPTAMLRLP 323
+ + L+ C VC K F R N++MHM HG +Y+ + G A R
Sbjct: 190 VELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAAARRC 249
Query: 324 CYCC-AAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKC-GKAFAVRGDWRTHE 381
Y C A GCR N HPR + LK + HY+R H K ++C +C GK FAV D RTHE
Sbjct: 250 SYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHE 309
Query: 382 KNCGKL-WYCACGSDFKHKRSLKDHIRAFGRGHA 414
K+CG+L W C+CG+ F K L H+ F GHA
Sbjct: 310 KHCGELRWLCSCGTFFSRKDKLMGHVALFAAGHA 343
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 270 QILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC--YCC 327
+IL T F C +C K F R N++MHM GHG +Y+ + ++ +++ P Y C
Sbjct: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSC 333
Query: 328 A-AGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG-KAFAVRGDWRTHEKNCG 385
GC+ N +H + +PLK ++ HYKR H K + C +C K F+V D +THEK+CG
Sbjct: 334 PYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCG 393
Query: 386 K-LWYCACGSDFKHKRSLKDHIRAFGRGH 413
+ W C+CG+ F K L H+ F +GH
Sbjct: 394 RDKWLCSCGTTFSRKDKLFGHVALF-QGH 421
>Os09g0485500 Similar to T6J4.5 protein (WIP6 protein)
Length = 181
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 180 VTVALHIGLPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXRMQVXXXXXXXXXXXXXXX 239
VTVALHIGLPSP+
Sbjct: 48 VTVALHIGLPSPT----AAADLISGLSSAAGRRSSTARRDEEEDEAEEAGGASRDDGDGG 103
Query: 240 XXXXXXLPLGCASIGIGKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQM 295
PLG AS IG+L KGQYWIPTPSQILIGPTQFSCPVC+KTFNRYNNMQ+
Sbjct: 104 DAADAAAPLGFASTPIGRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQV 159
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 260 KGQY-WIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLR-GTQPT 317
+G Y + + ++ P C VC K F R N++MHM GHG +Y+ + G P+
Sbjct: 145 RGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSPS 204
Query: 318 -------AMLRLPCYCCA-AGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG- 368
A R Y C GC+ N +H +PLK ++ HY+R H K F CR+C
Sbjct: 205 RSPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNV 264
Query: 369 KAFAVRGDWRTHEKNCGK-LWYCACGSDFKHKRSLKDHIRAFGRGHA 414
K F+V D RTHEK+CG+ W C+CG+ F K L H+ F GH+
Sbjct: 265 KRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD-GHS 310
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 256 GKLTKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRK-----GPES 310
G + I + L+ C VC K F R N++MHM HG +Y+ P
Sbjct: 182 GATSATDTIIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTK 241
Query: 311 L--RGTQPTAMLRLPCYCC-AAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKC 367
L +G T Y C GCR N H + +PLK + HYKR H K ++C +C
Sbjct: 242 LLAKGGDETMAAAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRC 301
Query: 368 G-KAFAVRGDWRTHEKNCGK-LWYCACGSDFKHKRSLKDHIRAFG 410
G K F+V D RTHEK+CG W C+CG+ F K L H+ F
Sbjct: 302 GRKHFSVLSDLRTHEKHCGDHRWLCSCGTSFSRKDKLIGHVSLFA 346
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 324
I + L+ ++ C +C K F R N+Q+H GH P L+ P ++R
Sbjct: 61 IALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNL-----PWKLKQRNPKEVVRKKV 115
Query: 325 YCC-AAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 383
Y C AGC + H AR L D ++ H+ RKHG K + C KC K +AV DW+ H K
Sbjct: 116 YVCPEAGC---VHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV 172
Query: 384 CGKLWY-CACGSDFKHKRSLKDHIRAF 409
CG Y C CG+ F + S H RAF
Sbjct: 173 CGTREYRCDCGTLFSRRDSFITH-RAF 198
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 269 SQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC---- 324
+IL T F C +C K F R N++MHM GHG +Y+ + P P
Sbjct: 221 DEILAPHTHF-CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPER 279
Query: 325 -YCCA-AGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG-KAFAVRGDWRTHE 381
Y C AGC+ N H +PLK ++ HYKR H K +C +CG K F+V D +THE
Sbjct: 280 RYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHE 339
Query: 382 KNCGK-LWYCACGSDFKHKRSLKDHIRAFGRGHA 414
K+CG+ W C+CG+ F K L H+ F +GHA
Sbjct: 340 KHCGRDRWLCSCGTSFSRKDKLFAHVALF-QGHA 372
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 271 ILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAG 330
L+ +F C VC K F R N+Q+H GH P L+ P R C
Sbjct: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
Query: 331 CRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY- 389
C + H +R L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y
Sbjct: 118 C---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
Query: 390 CACGSDFKHKRSLKDHIRAF 409
C CG+ F + S H RAF
Sbjct: 175 CDCGTLFSRRDSFITH-RAF 193
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 269 SQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT--AMLRLPCYC 326
S++L F C +C K F R N++MHM HG +++ R QP A + C
Sbjct: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSC 223
Query: 327 CAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG--KAFAVRGDWRTHEKNC 384
AGC N H R RPLK + H++R H K + C +CG K FAV D R+H ++C
Sbjct: 224 PYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHC 283
Query: 385 GK--LWYCACGSDFKHKRSLKDHIRAFGRGH 413
G+ W C+CG+ F K L H+ F GH
Sbjct: 284 GEEAQWRCSCGTTFSRKDKLFGHLALF-EGH 313
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 270 QILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAA 329
+ L+ +F C VC K F R N+Q+H GH P L+ P R C
Sbjct: 68 RTLMATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKEARRRVYLCPEP 122
Query: 330 GCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY 389
C + H +R L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y
Sbjct: 123 SC---VHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTREY 179
Query: 390 -CACGSDFKHKRSLKDHIRAF 409
C CG+ F + S H RAF
Sbjct: 180 RCDCGTLFSRRDSFITH-RAF 199
>AK067268
Length = 324
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 271 ILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAG 330
L+ +F C VC K F R N+Q+H GH P L+ P R C
Sbjct: 63 TLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPKETRRRVYLCPEPS 117
Query: 331 CRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY- 389
C + H +R L + ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y
Sbjct: 118 C---VHHDPSRALGNLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYR 174
Query: 390 CACGSDFKHKRSLKDHIRAF 409
C CG+ F + S H RAF
Sbjct: 175 CDCGTLFSRRDSFITH-RAF 193
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 324
I + L+ +F C VC K F R N+Q+H GH P L+ P R
Sbjct: 84 IALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPAQAQRRRV 138
Query: 325 YCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 384
Y C + H AR L D ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 139 YLCPEP--TCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKIC 196
Query: 385 GKLWY-CACGSDFKHKRSLKDHIRAF 409
G Y C CG+ F + S H RAF
Sbjct: 197 GTREYRCDCGTLFSRRDSFITH-RAF 221
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 324
I + L+ +F C VC K F R N+Q+H GH P L+ P R
Sbjct: 82 IALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKNPLQAQRRRV 136
Query: 325 YCCAA-GCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 383
Y C C + H +R L D ++ H+ RKHG K + C KC K +AV+ DW+ H K
Sbjct: 137 YLCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI 193
Query: 384 CGKLWY-CACGSDFKHKRSLKDHIRAF 409
CG Y C CG+ F + S H RAF
Sbjct: 194 CGTREYRCDCGTLFSRRDSFITH-RAF 219
>Os02g0518500
Length = 492
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 270 QILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAA 329
+ L+ ++ C VC+K F R N+Q+H GH ++ L+ T + C
Sbjct: 58 KTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWK-----LKQRSSTEAKKKVYVCPEI 112
Query: 330 GCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG-KLW 388
C + H R L D ++ HY RKHG K + C +C K +AV+ DW+ H K CG K +
Sbjct: 113 TCPH---HDATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKICGTKEY 169
Query: 389 YCACGSDFKHKRSLKDHIRAF 409
C CG+ F K S H RAF
Sbjct: 170 RCDCGTIFSRKDSFITH-RAF 189
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGS----QYRKGPESLRGTQPTAML 320
I + L+ +F C VC K F R N+Q+H GH ++R S T A
Sbjct: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAPR 85
Query: 321 RLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH 380
+ C C + H AR L D ++ H+ RKHG K + C +CGK +AV DW+ H
Sbjct: 86 KRVYVCPEPTC---VHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAH 142
Query: 381 EKNCGKLWY-CACGSDFKHKRSLKDHIRAF 409
KNCG Y C CG F K SL H RAF
Sbjct: 143 VKNCGTREYRCDCGILFSRKDSLLTH-RAF 171
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 324
I + L+ +F C +C K F R N+Q+H GH ++ S G +P R
Sbjct: 48 IALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRS--GKEP----RKRV 101
Query: 325 YCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 384
Y C ++ + H +R L D ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 102 YVCPE--KSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC 159
Query: 385 GKLWY-CACGSDFKHKRSLKDHIRAF 409
G Y C CG+ F + S H RAF
Sbjct: 160 GTREYRCDCGTLFSRRDSFITH-RAF 184
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 270 QILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQY----RKGPESLRGTQPTAMLRLPCY 325
+ L+ +F C +C K F R N+Q+H GH + R G G +P R Y
Sbjct: 73 RTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGGAGGGGGGEPP---RKRVY 129
Query: 326 CC-AAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 384
C A C + H +R L D ++ H+ RKHG K + C +CGK +AV DW+ H K C
Sbjct: 130 VCPEASC---VHHSPSRALGDLTGIKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKVC 186
Query: 385 GKLWY-CACGSDFKHKRSLKDHIRAF 409
G Y C CG+ F + S H RAF
Sbjct: 187 GTREYKCDCGTVFSRRDSFVTH-RAF 211
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 273 IGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCC-AAGC 331
+ +F C +C K F R N+Q+H GH P L+ +R Y C A C
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNL-----PWKLKQRGSKEAVRKKVYICPEASC 55
Query: 332 RNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY-C 390
+ H +R L D ++ H+ RKHG K + C KC K +AV DW+ H K CG Y C
Sbjct: 56 ---VHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKC 112
Query: 391 ACGSDFKHKRSLKDHIRAF 409
CG+ F + S H RAF
Sbjct: 113 DCGTIFSRRDSFITH-RAF 130
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 324
I + L+ +F C +C K F R N+Q+H GH P LR + +
Sbjct: 29 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLRQRSGKEVRKRVY 83
Query: 325 YCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 384
C C + H +R L D ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 84 VCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTC 140
Query: 385 GKLWY-CACGSDF 396
G Y C CG+ F
Sbjct: 141 GSREYRCDCGTLF 153
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,984,934
Number of extensions: 378983
Number of successful extensions: 1058
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 1018
Number of HSP's successfully gapped: 27
Length of query: 445
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 341
Effective length of database: 11,605,545
Effective search space: 3957490845
Effective search space used: 3957490845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)