BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0439400 Os05g0439400|AK121082
(452 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0439400 Similar to Arm repeat containing protein 652 0.0
Os02g0542800 108 7e-24
Os04g0418500 U box domain containing protein 103 3e-22
Os02g0540700 Similar to Arm repeat-containing protein 101 1e-21
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 91 3e-18
Os02g0732200 U box domain containing protein 87 3e-17
Os03g0240600 U box domain containing protein 87 4e-17
Os06g0248500 U box domain containing protein 81 1e-15
Os04g0437300 U box domain containing protein 79 9e-15
Os02g0548700 U box domain containing protein 78 1e-14
Os02g0738200 U box domain containing protein 78 1e-14
Os08g0481200 Similar to Arm repeat containing protein 78 2e-14
Os08g0415600 U box domain containing protein 77 3e-14
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 77 3e-14
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 76 4e-14
Os02g0488701 U box domain containing protein 76 4e-14
Os12g0161100 U box domain containing protein 76 5e-14
Os09g0378700 U box domain containing protein 75 1e-13
Os01g0823900 Arm repeat protein 74 2e-13
Os02g0690600 U box domain containing protein 74 2e-13
Os02g0234300 U box domain containing protein 73 4e-13
Os02g0705600 Armadillo-like helical domain containing protein 72 9e-13
Os03g0232600 U box domain containing protein 72 9e-13
Os01g0865700 U box domain containing protein 72 1e-12
Os05g0476700 Similar to Arm repeat protein 72 1e-12
Os04g0489800 U box domain containing protein 71 2e-12
Os04g0589700 U box domain containing protein 70 3e-12
Os11g0675800 69 5e-12
Os04g0348400 U box domain containing protein 69 6e-12
Os04g0417400 U box domain containing protein 69 7e-12
Os10g0123100 68 2e-11
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/452 (77%), Positives = 351/452 (77%)
Query: 1 MDAAVAGQHARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQR 60
MDAAVAGQHARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQR
Sbjct: 1 MDAAVAGQHARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQR 60
Query: 61 WLDTGHRTCPATRLPLASTDLVPNXXXXXXXXXXXXXXXXXXXXEVVLSQLXXXXXXXXX 120
WLDTGHRTCPATRLPLASTDLVPN EVVLSQL
Sbjct: 61 WLDTGHRTCPATRLPLASTDLVPNLLLRRLIHLHAATLPPSPSPEVVLSQLAAAGGEPAA 120
Query: 121 XXXXVRSLAAKIAPEKGKRXXXXXXXXXXXXXXXXXXXXFAKXXXXXXXXXXXXXILATV 180
VRSLAAKIAPEKGKR FAK ILATV
Sbjct: 121 AEKAVRSLAAKIAPEKGKRASVASAVAADLDSAVPALLSFAKGGAGADARVDAVRILATV 180
Query: 181 APELVPYLTGDGTEKRGRVRMAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLI 240
APELVPYLTGDGTEKRGRVRMAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLI
Sbjct: 181 APELVPYLTGDGTEKRGRVRMAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLI 240
Query: 241 AAGANGVMVLETILTSPVPDADAKTAIADRSELFPDLVRILKDAASPAAIRCMAAAVQVR 300
AAGANGVMVLETILTSPVPDADAKTAIADRSELFPDLVRILKDAASPAAIRCMAAAVQVR
Sbjct: 241 AAGANGVMVLETILTSPVPDADAKTAIADRSELFPDLVRILKDAASPAAIRCMAAAVQVR 300
Query: 301 GRPARSSMVRXXXXXXXXXXXXXXXXXXXXXXLGLLVEAARCTDGKXXXXXXXXXXXXXV 360
GRPARSSMVR LGLLVEAARCTDGK V
Sbjct: 301 GRPARSSMVRAGAIPALALAVAAAPTAVAESALGLLVEAARCTDGKAAIGADAAEVAAAV 360
Query: 361 MGRMIRVGPAGREFAVAVLWLSCCAGGGDRRMREAVASAPEAVGKLLVVMQGDCSPSTSR 420
MGRMIRVGPAGREFAVAVLWLSCCAGGGDRRMREAVASAPEAVGKLLVVMQGDCSPSTSR
Sbjct: 361 MGRMIRVGPAGREFAVAVLWLSCCAGGGDRRMREAVASAPEAVGKLLVVMQGDCSPSTSR 420
Query: 421 MAGELLRAVRMEQERKGLAAAYDSRTIHVMPY 452
MAGELLRAVRMEQERKGLAAAYDSRTIHVMPY
Sbjct: 421 MAGELLRAVRMEQERKGLAAAYDSRTIHVMPY 452
>Os02g0542800
Length = 114
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 57/61 (93%)
Query: 182 PELVPYLTGDGTEKRGRVRMAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLIA 241
PELVPYLTGDGTEKRG VRMAV+ALAAVLSAD V EDTKEGLI AL+AGDLGHI+NTLIA
Sbjct: 5 PELVPYLTGDGTEKRGWVRMAVDALAAVLSADEVNEDTKEGLINALIAGDLGHIMNTLIA 64
Query: 242 A 242
A
Sbjct: 65 A 65
>Os04g0418500 U box domain containing protein
Length = 451
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 12 RRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPA 71
R +R P P A P+ FRCPISL+VMRSPVSL TG TYDRASIQRWLD+G+ TCPA
Sbjct: 22 RSMRLP-PQHQALEVKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPA 80
Query: 72 TRLPLASTDLVPN 84
T LPL STDLVPN
Sbjct: 81 TMLPLPSTDLVPN 93
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 262 DAKTAIADRSELFPDLVRILKDA---------ASPAAIRCMAAAVQVRGRPARSSMVR-- 310
+A+ A+A+ +EL +LVR++ A A A + C+A + R R AR+ MVR
Sbjct: 254 EAREAVAESAELVAELVRLVGPADEKGSLDARAVGAGLSCLATISRSR-RAARAEMVRAG 312
Query: 311 XXXXXXXXXXXXXXXXXXXXXXLGLLVEAARCTDGKXXXXXXXXXXXXXVMGRMIRVGPA 370
L +L A C +G+ V+GRM++ G
Sbjct: 313 TVRAAARALRATAADPAASARALRVLESAVGCAEGRAALCEDAEQAVPAVVGRMMKAGRD 372
Query: 371 GREFAVAVLWLSCCAGGGDRRMREAVASAPEAVGKLLVVMQGDCSPSTSRMAGELLRAVR 430
G E A AVLW + C DRR +A ++ + +LL+++Q CSP+ +MA ELL+ +
Sbjct: 373 GAEAAEAVLW-AVCHKYRDRRDADAAEASEGGLTRLLLLLQSGCSPAARQMALELLKIYK 431
Query: 431 MEQERKGLAAAYDSRTIHVMPY 452
+ K A YDS+T H+MP+
Sbjct: 432 VNA--KSCLAGYDSKTTHIMPF 451
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 49/56 (87%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P FRCPISL+VMRSPVSL TG TYDRASIQRW+D+G+ TCPAT LPL STDLVPN
Sbjct: 76 PTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPLPSTDLVPN 131
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 106/233 (45%), Gaps = 26/233 (11%)
Query: 231 DLGHIVNTLIAAGANGVMVLETILTSPVPDADAKTAIADRSELFPDLVRI---------L 281
D +V +L+ GA G T+P + A+A+ EL +L+R+ L
Sbjct: 288 DAARLVESLLRDGARGA-------TAP----GVRAAVAESEELVAELIRLVGPTDEKGSL 336
Query: 282 KDAASPAAIRCMAAAVQVRGRPARSSMVRXXXX-XXXXXXXXXXXXXXXXXXLGLLVEAA 340
A A + C+AA V R AR+ MVR L +L A
Sbjct: 337 DAQAVDAGLSCLAAIVAAT-RRARAEMVRLGAVPAAVRVLATDHHGGSHAQALRVLEAAV 395
Query: 341 RCTDGKXXXXXXXXXXXXXVMGRMIRVGP-AGREFAVAVLWLSCCAGGGDRRMREAVASA 399
C +G+ V+ RM+R G G E AV+VLW + C DRR EA A++
Sbjct: 396 GCAEGRAAVCEVAEAAIPAVVSRMMRCGGMGGAEAAVSVLW-AVCHRYRDRRAVEAAAAS 454
Query: 400 PEAVGKLLVVMQGDCSPSTSRMAGELLRAVRMEQERKGLAAAYDSRTIHVMPY 452
+ KLL++MQ CSP+ +MA ELL+ ++ K A YDS+T H+MP+
Sbjct: 455 EGGLTKLLLLMQSGCSPAARQMASELLKMFKVNA--KSCLAGYDSKTTHIMPF 505
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%)
Query: 2 DAAVAGQHARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRW 61
D V HA + + SP P FRCPISLE+M+ PV + +G TY+R+ IQ+W
Sbjct: 202 DCVVTEDHANDALTTRSASIKHRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKW 261
Query: 62 LDTGHRTCPATRLPLASTDLVPN 84
LD+GH+TCP T+ PL+ T L PN
Sbjct: 262 LDSGHKTCPKTQQPLSHTSLTPN 284
>Os02g0732200 U box domain containing protein
Length = 637
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 17 PEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPL 76
PE + + + P FRCPISLE+MR PV + TG TY+RA IQRW+D G+RTCP T+L L
Sbjct: 251 PETHKKSDAVAIPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQLKL 310
Query: 77 ASTDLVPN 84
+ L PN
Sbjct: 311 QNITLTPN 318
>Os03g0240600 U box domain containing protein
Length = 445
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 4 AVAGQHARRRI--RPPEPLVM------AGSPSTPAAFRCPISLEVMRSPVSLPTGATYDR 55
A+ + AR+ + + P PL+ A + PA FRCPISL++MR PV+ PTG TYDR
Sbjct: 2 ALLARRARKAVMAKAPAPLLQKRGGGAAAELAIPAHFRCPISLDLMRDPVTAPTGITYDR 61
Query: 56 ASIQRWLDTGHRTCPATRLPLASTDLVPN 84
I+ WLDTG CP T PL DLVPN
Sbjct: 62 EGIEAWLDTGRAVCPVTHAPLRHEDLVPN 90
>Os06g0248500 U box domain containing protein
Length = 449
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 27 STPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
S PA F CPISLE+MR PV+ PTG TYDR S++ WL GH TCP T P+ DLVPN
Sbjct: 37 SVPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVPN 94
>Os04g0437300 U box domain containing protein
Length = 426
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 27 STPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLA-STDLVPN 84
S P FRCPISL++ PV+L TG TYDR I+RWL GHRTCP T PL +T LVPN
Sbjct: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
>Os02g0548700 U box domain containing protein
Length = 417
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLA-STDLVPN 84
P FRCPISLE+MR PV++ TG TYDRASI+ W+ TG+ TCP TR PL + L+PN
Sbjct: 19 PWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPN 75
>Os02g0738200 U box domain containing protein
Length = 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 10 ARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTC 69
AR++ +PPEP + P F CPISL++MR PV+ PTG TYDR ++ WL+ G TC
Sbjct: 30 ARQQQQPPEP-----AADVPDHFLCPISLDMMRDPVTAPTGITYDRDGVEVWLERGRPTC 84
Query: 70 PATRLPLASTDLVPN 84
P T PL +LVPN
Sbjct: 85 PVTGRPLRPEELVPN 99
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P F CPI+L +MR PV + TG TY+R SIQ+WLD+G RTCP TR L+ L PN
Sbjct: 270 PNDFLCPITLAIMRDPVIVATGQTYERRSIQKWLDSGERTCPKTRQRLSHMSLAPN 325
>Os08g0415600 U box domain containing protein
Length = 676
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 28 TPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P +CPI+LE+M PV+L TG TYDRASI+RW+ +G RTCP T L S D+VPN
Sbjct: 269 NPEGLQCPITLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPN 325
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 27 STPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
+ P FRCPISLE+M+ PV + TG TY+RA I++W+ +GH TCP T+ ++++ L PN
Sbjct: 215 TIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPN 272
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P FRCPISL++M+ PV + TG TY+R I+RWL+ GH TCP T+ L + L PN
Sbjct: 295 PDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPN 350
>Os02g0488701 U box domain containing protein
Length = 423
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P F CPIS E+MR PV L +G TYDR IQ WL G+RTCP T+ L++T L+PN
Sbjct: 40 PEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIPN 95
>Os12g0161100 U box domain containing protein
Length = 437
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 28 TPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
TP F CPISL+ M+ PV+ PTG +YDR +I RWL GH +CP T PL+ +DL PN
Sbjct: 5 TPQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLSDLTPN 61
>Os09g0378700 U box domain containing protein
Length = 712
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P A +CPI+L++M PV++ TG TYDRASI RW+ G RTCP T L++ DLVPN
Sbjct: 291 PEALQCPITLDLMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLSTADLVPN 346
>Os01g0823900 Arm repeat protein
Length = 680
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 26 PSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
P P+ FRCPISL++MR PV + +G TYDR SI RW +G TCP T LA+ +LV N
Sbjct: 272 PVPPSDFRCPISLDLMRDPVVVASGQTYDRESIDRWFSSGKSTCPKTGQVLANLELVSN 330
>Os02g0690600 U box domain containing protein
Length = 425
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 22 MAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDT-GHRTCPATRLPLASTD 80
MA P F CPIS+E+M PV++ TG TYDR SI+ WL G TCPAT PL++ D
Sbjct: 1 MAAMDEPPQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPLSNFD 60
Query: 81 LVPN 84
L PN
Sbjct: 61 LTPN 64
>Os02g0234300 U box domain containing protein
Length = 581
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 25 SPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
S S P F CPISL++MR PV TG TYDR SI +W++ GH TCP + LA LVPN
Sbjct: 147 SFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPN 206
>Os02g0705600 Armadillo-like helical domain containing protein
Length = 770
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 15 RPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRL 74
R + M+G+ + PA F CPIS ++MR PV + +G TY+R +I+RW G+ TCP T +
Sbjct: 257 RNEDQTSMSGAATPPAEFCCPISTKLMRDPVIITSGQTYERENIERWFREGYDTCPRTHI 316
Query: 75 PLASTDLVPN 84
L + ++PN
Sbjct: 317 KLENFAMIPN 326
>Os03g0232600 U box domain containing protein
Length = 459
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 38/61 (62%)
Query: 24 GSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVP 83
G + PA F CPISLE M PV+L TG TY+ A+I RWL GHRTCP T L +P
Sbjct: 61 GDEAVPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIP 120
Query: 84 N 84
N
Sbjct: 121 N 121
>Os01g0865700 U box domain containing protein
Length = 404
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDT--GHRTCPATRLPLAS-TDLVPN 84
P+ F CPISL++MR PV+LPTG +YDRA+I RWL RTCP TR PL +L PN
Sbjct: 9 PSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHGLELTPN 67
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 32 FRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
FRCPISL++MR PV +G TYDR SI RW +G TCP T LA+ +LVPN
Sbjct: 279 FRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLANLELVPN 331
>Os04g0489800 U box domain containing protein
Length = 800
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 22 MAGS-PSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTD 80
++GS P P RCPISL++M PV + +G TY+RA I++W +G+ TCP TR L+
Sbjct: 272 LSGSMPLPPEELRCPISLQLMHDPVIIASGQTYERACIEKWFSSGNTTCPKTRNELSQLS 331
Query: 81 LVPN 84
+ PN
Sbjct: 332 MTPN 335
>Os04g0589700 U box domain containing protein
Length = 421
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 22 MAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQRW-LDTGHRTCPATRLPLASTD 80
MA P P F CPIS+E+M PV++ TG TYDR SI+RW G TCPAT LAS D
Sbjct: 1 MAMEP--PPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRLASFD 58
Query: 81 LVPN 84
PN
Sbjct: 59 FTPN 62
>Os11g0675800
Length = 91
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 39/42 (92%)
Query: 201 MAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLIAA 242
MAV+ALAAVLSADGV EDTKEGLI AL+AGDLG I+NTLIAA
Sbjct: 1 MAVDALAAVLSADGVNEDTKEGLIDALIAGDLGPIMNTLIAA 42
>Os04g0348400 U box domain containing protein
Length = 459
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
PA F CPIS +MR PV + +G TYDR SIQ W G++ CP T+ L+ T ++PN
Sbjct: 76 PALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLSHTIVIPN 131
>Os04g0417400 U box domain containing protein
Length = 451
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 24 GSPSTPAA---------FRCPISLEVMRSPVSLPTGATYDRASIQRWLDT-GHRTCPATR 73
G S+PAA F CPISLE+MR PV+L TG TYDR SI+RW+ T GH CP T+
Sbjct: 2 GEESSPAAAPAVEVLSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTK 61
Query: 74 LPLASTDLVPN 84
LA D P
Sbjct: 62 QRLAPADREPT 72
>Os10g0123100
Length = 460
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWL--------DTGHRTCPATRLPLASTD 80
P FRCPISLE+MR PV PTG TYDRA I+ WL TCP T+ L + D
Sbjct: 22 PPEFRCPISLELMRDPVVGPTGITYDRAGIEAWLLAAGAGKTAAASSTCPVTKGDLRADD 81
Query: 81 LVPN 84
LVPN
Sbjct: 82 LVPN 85
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,259,412
Number of extensions: 467714
Number of successful extensions: 1852
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 1840
Number of HSP's successfully gapped: 34
Length of query: 452
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 348
Effective length of database: 11,605,545
Effective search space: 4038729660
Effective search space used: 4038729660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)