BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0347200 Os04g0347200|J033091K14
(153 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0347200 Similar to Basic endochitinase precursor (EC 3... 259 4e-70
Os07g0420300 198 1e-51
Os01g0860500 Similar to Hevamine A precursor [Includes: Chi... 135 9e-33
Os01g0303100 Similar to Chitinase precursor (EC 3.2.1.17) 133 5e-32
Os07g0290900 126 6e-30
Os01g0660200 Acidic class III chitinase OsChib3a precursor ... 122 9e-29
Os01g0691000 Similar to Acidic endochitinase SE2 precursor ... 115 1e-26
Os01g0860400 Similar to Acidic endochitinase precursor (EC ... 114 2e-26
Os01g0687400 Similar to Chitinase (EC 3.2.1.14) 94 4e-20
Os11g0701800 Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.... 92 2e-19
Os07g0632000 Similar to Xylanase inhibitor protein I precursor 90 6e-19
Os08g0519300 Glycoside hydrolase, family 18 protein 90 8e-19
Os05g0247100 Similar to Chitinase (EC 3.2.1.14) III C00481-... 82 1e-16
Os11g0701400 Chitinase (EC 3.2.1.14) III C10150-rice (EC 3.... 82 1e-16
Os11g0701900 Glycoside hydrolase, family 18 protein 82 2e-16
Os11g0701000 Class III chitinase homologue (OsChib3H-c) 79 1e-15
Os05g0247500 Glycoside hydrolase, family 18 protein 78 3e-15
Os05g0247800 Glycoside hydrolase, family 18 protein 76 1e-14
Os11g0700900 Conserved hypothetical protein 76 1e-14
Os11g0702200 Glycoside hydrolase, family 18 protein 74 3e-14
AK122053 74 5e-14
Os11g0701200 Glycoside hydrolase, family 18 protein 72 2e-13
Os05g0248200 Glycoside hydrolase, family 18 protein 70 7e-13
Os11g0701100 Similar to Class III chitinase homologue (OsCh... 66 1e-11
Os08g0518900 Chitinase (EC 3.2.1.14) 65 2e-11
Os11g0701500 Similar to Class III chitinase homologue (OsCh... 65 2e-11
>Os04g0347200 Similar to Basic endochitinase precursor (EC 3.2.1.14)
Length = 153
Score = 259 bits (663), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/153 (85%), Positives = 131/153 (85%)
Query: 1 DCLPLDVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHV 60
DCLPLDVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHV
Sbjct: 1 DCLPLDVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHV 60
Query: 61 QFYNNPXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEAL 120
QFYNNP LPRSSVYLGLPAAPGAANSGYVPPAALAGEAL
Sbjct: 61 QFYNNPACSYRASNAAAFAAAWRKWASSLPRSSVYLGLPAAPGAANSGYVPPAALAGEAL 120
Query: 121 PIVQRSRNYGGVMLWSRYWDRRTGYSKKIKHAV 153
PIVQRSRNYGGVMLWSRYWDRRTGYSKKIKHAV
Sbjct: 121 PIVQRSRNYGGVMLWSRYWDRRTGYSKKIKHAV 153
>Os07g0420300
Length = 264
Score = 198 bits (504), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 108/151 (71%)
Query: 3 LPLDVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQF 62
+ L A Y RYLKAYSGRKPGG+KVWLTAAPQCPFPDRMLGEALRTG+FDRVHVQF
Sbjct: 114 IELGSNAHYGDLARYLKAYSGRKPGGRKVWLTAAPQCPFPDRMLGEALRTGLFDRVHVQF 173
Query: 63 YNNPXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPI 122
YNNP LP SSVYLGLPA GAAN+GYV PA L LPI
Sbjct: 174 YNNPVCNYRASNVAAFTSAWNKWAASLPGSSVYLGLPAVSGAANNGYVAPATLKENVLPI 233
Query: 123 VQRSRNYGGVMLWSRYWDRRTGYSKKIKHAV 153
VQ+S+NYGG+MLWSR WD++TGYSK +K AV
Sbjct: 234 VQKSKNYGGIMLWSRNWDKQTGYSKSVKSAV 264
>Os01g0860500 Similar to Hevamine A precursor [Includes: Chitinase (EC 3.2.1.14)
Length = 305
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 86/138 (62%)
Query: 16 RYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXX 75
RYLKAYS + K V+LTAAPQCPFPD LG AL TG+FD V VQFYNNP
Sbjct: 168 RYLKAYSRQGSSKKPVYLTAAPQCPFPDASLGVALSTGLFDYVWVQFYNNPPCQYSSSNG 227
Query: 76 XXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLW 135
+P V+LGLPAA AA SG+V + L + LP+V++S YGG+MLW
Sbjct: 228 VGNLASAWKQWTSIPAGRVFLGLPAAAEAAGSGFVETSDLVSKVLPVVKKSPKYGGIMLW 287
Query: 136 SRYWDRRTGYSKKIKHAV 153
SRY+D TGYS K+K +V
Sbjct: 288 SRYYDGLTGYSDKVKSSV 305
>Os01g0303100 Similar to Chitinase precursor (EC 3.2.1.17)
Length = 335
Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 17 YLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNP---XXXXXXX 73
YLKAYSG+ GK+V L+AAPQCPFPD+ +G+AL TG+FD V VQFYNNP
Sbjct: 196 YLKAYSGKGAAGKEVLLSAAPQCPFPDQWVGKALDTGLFDYVWVQFYNNPPCQYAAGSGG 255
Query: 74 XXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVM 133
+ ++LGLPA+PGAA SG++P +L + LP ++ S YGGVM
Sbjct: 256 GAANLLDAWRQWTSGVEARYIFLGLPASPGAAGSGFIPVGSLESQVLPALKASSKYGGVM 315
Query: 134 LWSRYWDRRTGYSKKIKHAV 153
LWSRY+D + GYS IK+AV
Sbjct: 316 LWSRYYDDQDGYSSAIKNAV 335
>Os07g0290900
Length = 297
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 16 RYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXX 75
RYLK YS G++V+LTAAPQCPFPD +G+AL TG+FD V VQFYNNP
Sbjct: 164 RYLKGYSNS---GRRVYLTAAPQCPFPDACIGDALNTGLFDYVWVQFYNNPPCQYSSGST 220
Query: 76 XXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLW 135
+P ++LGLPA+P AA SG++P L + LP+++ S YGG+MLW
Sbjct: 221 SNLADAWKQWLS-VPAKQIFLGLPASPQAAGSGFIPADDLKSQVLPVIKSSGKYGGIMLW 279
Query: 136 SRYWDRRTGYSKKIKHAV 153
S+Y+D + YS +K V
Sbjct: 280 SKYYDDQDDYSSSVKSDV 297
>Os01g0660200 Acidic class III chitinase OsChib3a precursor (Chitinase) (EC
3.2.1.14)
Length = 301
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 9 ARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXX 68
A Y + +L YS + GGKKV LTAAPQCP+PD LG AL+TG+FD V VQFYNNP
Sbjct: 158 AHYDELATFLSRYSAQG-GGKKVILTAAPQCPYPDASLGPALQTGLFDSVWVQFYNNPPC 216
Query: 69 XXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRN 128
+ S Y+G+PAA AA SGYV P L LP VQ +
Sbjct: 217 QYANGDASNLVSAWNTWTGGVSAGSFYVGVPAAEAAAGSGYVAPGDLTSAVLPAVQGNAK 276
Query: 129 YGGVMLWSRYWDRRTGYSKKIKHAV 153
YGG+M+W+R++D + +S ++K +V
Sbjct: 277 YGGIMVWNRFYDVQNNFSNQVKSSV 301
>Os01g0691000 Similar to Acidic endochitinase SE2 precursor (EC 3.2.1.14)
Length = 358
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 27 GGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXX- 85
GGK LTAAPQCP+PD L AL TG+FD V VQFYNNP
Sbjct: 183 GGKTYLLTAAPQCPYPDASLAAALATGLFDHVWVQFYNNPPCQYAAPGDASALRSAWAQW 242
Query: 86 XXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRTGY 145
LP ++V+LGLPA+ AA+SG+V LA + LP+V+ + NYGG+MLWSR +D+ + +
Sbjct: 243 TAGLPAATVFLGLPASLDAADSGFVDADTLASQVLPVVEGAANYGGIMLWSRSYDKDSSF 302
Query: 146 SKKIKHAV 153
S K++ A+
Sbjct: 303 SVKLQAAL 310
>Os01g0860400 Similar to Acidic endochitinase precursor (EC 3.2.1.14)
Length = 297
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
Query: 6 DVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNN 65
D LAR LK+ + GG++V L+AAPQCPFPD G A+ TG+FD V VQFYNN
Sbjct: 160 DDLARDLKSLG--------RSGGRRVVLSAAPQCPFPDEWDGGAISTGLFDAVWVQFYNN 211
Query: 66 PXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQR 125
P +P ++LGLPA+ AA +G+VP L LP+++
Sbjct: 212 PECQFSAGRGAFMDAWRKWES--VPAGRLFLGLPASKDAAGTGFVPAGELNSRVLPLIRG 269
Query: 126 SRNYGGVMLWSRYWDRRTGYSKKIKHAV 153
S YGGVMLWS+Y+D +TGYS IK V
Sbjct: 270 SPKYGGVMLWSKYYDDQTGYSSAIKSHV 297
>Os01g0687400 Similar to Chitinase (EC 3.2.1.14)
Length = 302
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 33 LTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXXXXXLPR- 91
LTAAPQCP+PD L A++TGVF V VQFYNN +P
Sbjct: 179 LTAAPQCPYPDAHLDAAIKTGVFSHVWVQFYNNRQCQYASGDASALQAAWAQWTSGVPAP 238
Query: 92 SSVYLGLPAAPGAA-NSGYVPPAALAGEALPIVQ-RSRNYGGVMLWSRYWDRRTGYSKKI 149
+ V+LGLP AP AA + GY+ L + LP V+ + NYGGVMLW+R+ D GY K+
Sbjct: 239 ADVFLGLPTAPAAAPSGGYIDADTLLSQVLPAVEGAAANYGGVMLWNRWRDVTAGYGAKL 298
Query: 150 KHAV 153
K V
Sbjct: 299 KGKV 302
>Os11g0701800 Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.2.1.14) (Class III
chitinase homologue (OsChib3H-a)H-)
Length = 304
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 6 DVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNN 65
D LAR L Y K Y R P V LTA +C FPD + +AL T +F+R+HV+FY++
Sbjct: 163 DDLARNLY--AYNKMYRARTP----VRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDD 216
Query: 66 PXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQR 125
P S VYLGL AA + V L + LP VQ+
Sbjct: 217 ATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQK 276
Query: 126 SRNYGGVMLWSRYWDRRTGYSKKIKH 151
++NYGG+MLW R++D++TGY K +K+
Sbjct: 277 AKNYGGIMLWDRFYDKQTGYGKTVKY 302
>Os07g0632000 Similar to Xylanase inhibitor protein I precursor
Length = 316
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 25 KPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXX 84
KP + + LTA +C FPDR AL TG F+RVHV+FY
Sbjct: 183 KPPRRALHLTATTRCAFPDRGAARALATGAFERVHVRFYGGGGGGDDNCTVYWEDAWDRW 242
Query: 85 XXXXLPRSSVYLGLPAAPGAAN------SGYVPPAALAGEALPIVQRSRNYGGVMLWSRY 138
PRS +Y GLPAAP A SGYV P L +P +Q++ NYGG M+W RY
Sbjct: 243 TAA-YPRSRIYFGLPAAPAVAEEEQDGRSGYVYPKTLYYRYVPELQKAANYGGFMIWDRY 301
Query: 139 WDRRTGYSKKIKH 151
D+++GYS +K+
Sbjct: 302 SDKQSGYSGYVKN 314
>Os08g0519300 Glycoside hydrolase, family 18 protein
Length = 283
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 17 YLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXX 76
Y K Y R P V LTA +C FPD + +AL T +F+R+HV+FY++
Sbjct: 151 YNKLYRARTP----VRLTATVRCMFPDMRMTKALDTKLFERIHVRFYDDAKCSYNHGGLA 206
Query: 77 XXXXXXXXXXXXLPRSSVYLGLPAA--PGAANSGYVPPAALAGEALPIVQRSRNYGGVML 134
P S VYLGL A PG ++ +V L LP VQ+++NYGG+ML
Sbjct: 207 GVMAQWSKWTARYPNSEVYLGLAAVNLPGKNDNVFVKQ--LYYYLLPNVQKAKNYGGIML 264
Query: 135 WSRYWDRRTGYSKKIKH 151
W R++D++TGY K +K+
Sbjct: 265 WDRFFDKQTGYGKTVKY 281
>Os05g0247100 Similar to Chitinase (EC 3.2.1.14) III C00481-rice (EC 3.2.1.14)
Length = 297
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 10 RYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXX 69
Y + R L A++ G V LTA +C FPD+ L AL TG+F R+HV+ + +
Sbjct: 156 HYDELARRLYAHNKDYKGRLGVMLTATARCVFPDQRLQAALSTGLFSRIHVKVFGD---- 211
Query: 70 XXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNY 129
P+S V +G+ A+P A GYV L + L + + NY
Sbjct: 212 ---GRCASRREELEKWMAAYPQSRVLVGVVASPEADRDGYVSHKDLYYDVLQFINKLPNY 268
Query: 130 GGVMLWSRYWDRRTGYS 146
GG+M+W+RYWD++TG++
Sbjct: 269 GGIMVWNRYWDKKTGWT 285
>Os11g0701400 Chitinase (EC 3.2.1.14) III C10150-rice (EC 3.2.1.14)
Length = 289
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 19 KAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXX 78
K YS R GK V LTA P+C FPDR L +AL TGVF R+HV+ + +
Sbjct: 163 KLYSYRNNKGKGVMLTATPRCRFPDRRLEKALATGVFARIHVRMFGDD-----VNCTAAP 217
Query: 79 XXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRY 138
P S VYLGL A+ + GY+ P L + ++ NYGG M+W RY
Sbjct: 218 RESWEKWAAAYPASQVYLGLVASS-EQDPGYLSPKPLYYTLVMYIRDRLNYGGKMIWDRY 276
Query: 139 WDRRTGYS 146
+D++T YS
Sbjct: 277 YDKKTDYS 284
>Os11g0701900 Glycoside hydrolase, family 18 protein
Length = 300
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 31 VWLTAAPQCPFPDRMLGEA-LRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXXXXXL 89
V LTA +C GEA + TG+ R+HV+FY++
Sbjct: 177 VLLTATVRCMDGQETSGEAAVATGLIGRIHVRFYDDRRCSYDSSERRPFYGAWLGWTARY 236
Query: 90 PRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRTGYSKKI 149
+SV++GLPAA AA+ G++ PAAL +ALP+V+ + NYGGV+LW+R++DRR+ Y + I
Sbjct: 237 ANASVHVGLPAAWDAASDGWINPAALVFDALPLVRGTPNYGGVVLWNRHFDRRSRYGQTI 296
Query: 150 K 150
K
Sbjct: 297 K 297
>Os11g0701000 Class III chitinase homologue (OsChib3H-c)
Length = 312
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 31 VWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXXXXXLP 90
+ LTA +C +PD + +AL T +F ++HV+FY++P P
Sbjct: 190 IMLTATVRCSYPDPRMKKALDTKLFTQIHVRFYDDPRCSYNHAGLAGVMAQWNRWSARYP 249
Query: 91 RSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRTGYSKKIK 150
S ++LGL AA + V L+ + LP VQ++ +Y GV LW+ Y+D +T Y + +K
Sbjct: 250 NSRIFLGLAAANVTGKNDMVGVGELSRKLLPAVQKTESYAGVTLWNSYYDSKTHYGRYVK 309
Query: 151 H 151
H
Sbjct: 310 H 310
>Os05g0247500 Glycoside hydrolase, family 18 protein
Length = 293
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 6 DVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNN 65
D LAR L G GG V LTA +C FPD+ AL TG+F R+HV+ +N+
Sbjct: 165 DELARLLH---------GHSNGG--VMLTATARCVFPDQRQQAALATGLFSRIHVKLFND 213
Query: 66 PXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQR 125
P S +Y+ + A+P A Y+ L + L + +
Sbjct: 214 ------GRCTWGRRESLEKWAAAYPDSRIYVSIVASPEADRDAYMSHKDLYFDVLQFINK 267
Query: 126 SRNYGGVMLWSRYWDRRTGY 145
NYGG+M+W+RYWD++TGY
Sbjct: 268 LPNYGGIMVWNRYWDKKTGY 287
>Os05g0247800 Glycoside hydrolase, family 18 protein
Length = 293
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 31 VWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXXXXXLP 90
V +TA +C +PD L EAL TG+F R+HV+ +++ P
Sbjct: 181 VMVTATTRCGYPDHRLDEALATGLFHRIHVKMFSD-----GRCPAWSRRQSFEKWAKTYP 235
Query: 91 RSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRTGYSKKI 149
+S V +G+ A+P Y+PP AL L + + N+GGVM+W R++D++TG++ +
Sbjct: 236 QSRVLIGVVASPDVDKDAYMPPEAL-NNLLQFINKQPNFGGVMVWDRFYDKKTGFTAHL 293
>Os11g0700900 Conserved hypothetical protein
Length = 245
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 24 RKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXX 83
R P G + LTA +C +PD + AL T +F R+HV+FY++P
Sbjct: 118 RDPIG--IMLTATVRCSYPDPRMKAALDTKLFRRIHVRFYDDPSCSYNHAGLAGVMAQWN 175
Query: 84 XXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRT 143
P ++LG+ AA + V L + LP VQ + YGGVMLW+ Y+D T
Sbjct: 176 KWSATYPDGQIFLGVVAANLTGKNDMVAVGELRDKLLPAVQNTDTYGGVMLWNSYYDSLT 235
Query: 144 GYSKKIK 150
Y + +K
Sbjct: 236 HYGRYVK 242
>Os11g0702200 Glycoside hydrolase, family 18 protein
Length = 302
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 11 YLKNCRYLKAYSGRKPGGKKVWLTAAPQCP---FPDRMLGEALRT-GVFDRVHVQFYNNP 66
Y + R L+++ KP V LTA+P C F D + E ++T +F+R+HV+FYN
Sbjct: 163 YDELARRLRSFGREKPA---VRLTASPACSLALFDDEV--ETMKTLSLFERLHVRFYNES 217
Query: 67 XXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRS 126
P + V +G PA SG+V P L L VQ
Sbjct: 218 SCDYNYFETRPFWGAWRTWTSRFPAARVQVGWPAME--EMSGFVDPQTLRESVLSSVQDD 275
Query: 127 RNYGGVMLWSRYWDRRTGYSKKIKHAV 153
NYGGVMLW RY+D+ TG+ + IK V
Sbjct: 276 ANYGGVMLWDRYYDKITGFGRAIKDIV 302
>AK122053
Length = 304
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 24 RKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXX 83
R P G + LTA +C +PD + AL T +F R+HV+FY++P
Sbjct: 177 RDPIG--IMLTATVRCSYPDPRMKAALDTKLFRRIHVRFYDDPSCSYNHAGLAGVMAQWN 234
Query: 84 XXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRT 143
P ++LG+ AA + V L G+ LP +Q + YGGVMLW+ Y+ T
Sbjct: 235 KWSATYPDGQIFLGVVAANLTGKNDMVAVGELRGKLLPAMQNTDTYGGVMLWNSYYGSLT 294
Query: 144 GYSKKIK 150
Y + +K
Sbjct: 295 HYGRYVK 301
>Os11g0701200 Glycoside hydrolase, family 18 protein
Length = 292
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 30 KVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXXXXXXXL 89
++ LTA +C +PD L AL TG+F +HV+ +
Sbjct: 174 EMLLTATTRCSYPDHRLDMALATGLFTHIHVRVFGGGGDAGCTTRHRASWERWAAA---Y 230
Query: 90 PRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRTGYS 146
P S VYLG+ A+P + Y+P L + L + NYGG+M+W RY+D++TGYS
Sbjct: 231 PGSLVYLGVVASPEQDANAYLPRKVLFSDVLSHIVEKPNYGGLMIWDRYYDKKTGYS 287
>Os05g0248200 Glycoside hydrolase, family 18 protein
Length = 297
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 11 YLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXX 70
Y K + L A++ G V LTA +C +PD L EAL TG+F R+HV+ +++
Sbjct: 162 YNKLAKLLYAHNKDYRGTVGVMLTATTRCEYPDHRLDEALATGLFHRIHVKKFSD----- 216
Query: 71 XXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYG 130
P+S V +G+ A+ Y+ P L + + N+G
Sbjct: 217 GRCPASSWIQSFQKWAKMYPQSRVLVGVVASREVDREAYISPEDLKKLMQYVFSKLPNFG 276
Query: 131 GVMLWSRYWDRRTGYSKKIK 150
GVM+W R++D +TG++ +++
Sbjct: 277 GVMVWDRFYDEKTGFTGRLR 296
>Os11g0701100 Similar to Class III chitinase homologue (OsChib3H-h) (Fragment)
Length = 290
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 6 DVLARYLKNCRYLKAYSGRKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNN 65
D LAR L Y K Y GR V LTA +C +PD L +AL TGVF R+HV+ + +
Sbjct: 160 DDLARRLDG--YNKYYRGRV----GVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGD 213
Query: 66 PXXXXXXXXXXXXXXXXXXXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQR 125
P S VY+GL A+P +S ++ L E L V+
Sbjct: 214 E------QCTMSPRYSWEKWAAAFPGSKVYIGLVASP-EQDSAWMFQKDLYYEMLQFVRS 266
Query: 126 SRNYGGVMLWSRYWDRRTGYSKK 148
NYGG+ ++ RY+D++ Y+ +
Sbjct: 267 LPNYGGLAIYDRYFDKKANYTGE 289
>Os08g0518900 Chitinase (EC 3.2.1.14)
Length = 315
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 24 RKPGGKKVWLTAAPQCPFPDR--MLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXX 81
R P G K LTA C + D + +AL T +F R+HV+FY++P
Sbjct: 185 RDPIGFK--LTATVSCAYDDSDPRMKKALETYLFRRIHVRFYDDPRCSYNHAGLAGVMAQ 242
Query: 82 XXXXXXXLP-RSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWD 140
P +YLGL AA + V L + LP VQ++ YGGVMLW+ Y+D
Sbjct: 243 WNRWSASYPYNGKIYLGLAAANLTGKNDMVAVGELYRKLLPAVQKTDTYGGVMLWNSYYD 302
Query: 141 RRTGYSKKIK 150
T Y + +
Sbjct: 303 SITHYGRYVS 312
>Os11g0701500 Similar to Class III chitinase homologue (OsChib3H-g) (Fragment)
Length = 284
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 24 RKPGGKKVWLTAAPQCPFPDRMLGEALRTGVFDRVHVQFYNNPXXXXXXXXXXXXXXXXX 83
R+ G+ V LTA +C +PD + AL TGVF R+HV+ + +
Sbjct: 166 RQLHGRGVLLTATVRCAYPDSRMEAALATGVFARIHVRIFGDD------QCTMFPKDAWE 219
Query: 84 XXXXXLPRSSVYLGLPAAPGAANSGYVPPAALAGEALPIVQRSRNYGGVMLWSRYWDRRT 143
PR +V+L + A+P + GY+ L + + NYGG+ +W RY+D++
Sbjct: 220 KWAAAYPRCTVFLTVVASP-EQDEGYMFQKDLYYGVQQFIDKEPNYGGIAIWDRYYDKKA 278
Query: 144 GYSKK 148
YS +
Sbjct: 279 NYSGE 283
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,265,862
Number of extensions: 190352
Number of successful extensions: 564
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 537
Number of HSP's successfully gapped: 28
Length of query: 153
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 61
Effective length of database: 12,232,113
Effective search space: 746158893
Effective search space used: 746158893
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 151 (62.8 bits)