Os11g0702200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 18 protein.
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Os11g0702200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 18 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.89 | 0.504 | 2.99 | -0.133 | 0.115 | -0.579 | 0.0563 | 2.85 | -0.000376 | 7.75 | 1 | 165 | -- | -- |
| 119.03 | 0.508 | 2.96 | -0.137 | 0.098 | -0.367 | -0.0831 | -- | 0.0211 | 7.96 | 1.3 | 314 | -- | -- |
| 114.9 | 0.499 | 2.99 | -0.131 | 0.117 | -0.575 | -- | 2.83 | -0.000822 | 7.62 | 1.015 | 164 | -- | -- |
| 118.36 | 0.507 | 2.97 | -0.105 | 0.0323 | -0.267 | -- | -- | -0.00233 | 7.89 | 2.9 | 325 | -- | -- |
| 115.53 | 0.501 | 3 | -0.143 | -- | -0.663 | -- | 2.97 | 0.00437 | -- | 1 | 164 | -- | -- |
| 120.3 | 0.514 | 2.97 | -0.0228 | 0.219 | -- | -0.308 | -- | -0.0174 | 6.25 | -- | -- | -- | -- |
| 120.48 | 0.514 | 2.97 | -0.0254 | 0.219 | -- | -- | -- | -0.0159 | 6.74 | -- | -- | -- | -- |
| 118.38 | 0.507 | 2.97 | -0.116 | -- | -0.29 | -- | -- | -0.0032 | -- | 2.985 | 327 | -- | -- |
| 118.64 | 0.507 | 2.97 | -- | 0.0523 | -0.238 | -- | -- | 0.00171 | 8.46 | 3 | 308 | -- | -- |
| 122.99 | 0.518 | 2.97 | -0.0204 | -- | -- | -- | -- | -0.0116 | -- | -- | -- | -- | -- |
| 120.5 | 0.513 | 2.96 | -- | 0.219 | -- | -- | -- | -0.0131 | 6.75 | -- | -- | -- | -- |
| 118.72 | 0.507 | 2.97 | -- | -- | -0.273 | -- | -- | 0.00843 | -- | 2.951 | 327 | -- | -- |
| 123 | 0.518 | 2.97 | -- | -- | -- | -- | -- | -0.00935 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.35 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 4 | 101.36 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 13 | 104.36 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 19 | 104.90 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 29 | 107.53 | wind | 1 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 30 | 107.56 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 2 |
| 34 | 110.32 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 57 | 111.26 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 70 | 111.69 | wind | 1 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 71 | 111.73 | wind | 1 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 99 | 112.42 | wind | 1 | 10 | < th | dose independent | rect. | 24 | 3 |
| 101 | 112.46 | wind | 1 | 90 | < th | dose independent | rect. | 14 | 13 |
| 114 | 112.67 | wind | 1 | 90 | < th | dose independent | rect. | 10 | 17 |
| 156 | 113.12 | wind | 1 | 720 | < th | dose independent | rect. | 22 | 2 |
| 167 | 113.26 | wind | 1 | 270 | < th | dose dependent | sin | 17 | NA |
| 244 | 113.88 | wind | 1 | 10 | < th | dose dependent | sin | 17 | NA |
| 259 | 113.96 | wind | 1 | 10 | < th | dose independent | sin | 17 | NA |
| 301 | 114.36 | wind | 1 | 10 | > th | dose independent | sin | 16 | NA |
| 344 | 114.59 | wind | 1 | 90 | > th | dose independent | sin | 15 | NA |
| 358 | 114.62 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 19 |
| 381 | 114.73 | humidity | 80 | 10 | > th | dose independent | rect. | 10 | 1 |
| 401 | 114.84 | humidity | 80 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 437 | 115.02 | wind | 1 | 270 | < th | dose independent | sin | 16 | NA |
| 455 | 115.08 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 3 |
| 470 | 115.14 | wind | 3 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 553 | 115.51 | humidity | 60 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 595 | 115.65 | humidity | 60 | 90 | < th | dose independent | rect. | 9 | 1 |
| 622 | 115.71 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 20 |
| 628 | 115.72 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 15 |
| 633 | 115.73 | wind | 3 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 644 | 115.80 | wind | 1 | 720 | > th | dose independent | rect. | 17 | 8 |
| 646 | 115.80 | wind | 3 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 655 | 115.85 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 656 | 115.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 675 | 115.90 | wind | 1 | 10 | < th | dose independent | rect. | 24 | 9 |
| 689 | 115.93 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 5 | 6 |
| 704 | 115.99 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 10 |
| 725 | 116.03 | wind | 1 | 10 | > th | dose independent | rect. | 16 | 23 |
| 754 | 116.11 | wind | 9 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 755 | 116.11 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 773 | 116.11 | wind | 9 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 774 | 116.11 | radiation | 30 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 809 | 116.12 | radiation | 20 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 897 | 116.17 | radiation | 20 | 10 | > th | dose independent | rect. | 16 | 1 |
| 935 | 116.22 | wind | 1 | 90 | > th | dose independent | no | NA | NA |