Os11g0701400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chitinase (EC 3.2.1.14) III C10150-rice (EC 3.2.1.14).
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Os11g0701400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Chitinase (EC 3.2.1.14) III C10150-rice (EC 3.2.1.14).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.5 | 0.578 | 3.02 | 0.0465 | 0.413 | 0.348 | 0.425 | 0.339 | -0.172 | 12 | 19.81 | 63 | -- | -- |
| 151.9 | 0.574 | 3.02 | 0.0605 | 0.431 | 0.349 | 0.334 | -- | -0.172 | 12 | 19.81 | 59 | -- | -- |
| 152.22 | 0.575 | 3.02 | 0.0501 | 0.413 | 0.34 | -- | 0.287 | -0.171 | 11.7 | 19.89 | 63 | -- | -- |
| 151.85 | 0.574 | 3.02 | 0.0561 | 0.406 | 0.333 | -- | -- | -0.167 | 11.9 | 19.82 | 63 | -- | -- |
| 156.42 | 0.582 | 3.02 | 0.0739 | -- | 0.116 | -- | 0.108 | -0.176 | -- | 34.96 | 54 | -- | -- |
| 155.24 | 0.584 | 3.03 | 0.0301 | 0.153 | -- | 0.132 | -- | -0.184 | 11.1 | -- | -- | -- | -- |
| 155.31 | 0.584 | 3.03 | 0.0354 | 0.153 | -- | -- | -- | -0.183 | 11 | -- | -- | -- | -- |
| 156.2 | 0.582 | 3.03 | 0.0205 | -- | 0.173 | -- | -- | -0.186 | -- | 48.13 | 34 | -- | -- |
| 151.89 | 0.574 | 3.02 | -- | 0.41 | 0.341 | -- | -- | -0.17 | 12 | 19.82 | 63 | -- | -- |
| 156.76 | 0.585 | 3.03 | 0.0319 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 155.34 | 0.583 | 3.03 | -- | 0.153 | -- | -- | -- | -0.187 | 11 | -- | -- | -- | -- |
| 156.19 | 0.582 | 3.03 | -- | -- | 0.196 | -- | -- | -0.189 | -- | 47.47 | 45 | -- | -- |
| 156.79 | 0.584 | 3.03 | -- | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.35 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 143.77 | humidity | 90 | 90 | > th | dose independent | rect. | 7 | 1 |
| 5 | 144.00 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 2 |
| 11 | 144.45 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 13 | 144.45 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 21 | 145.13 | radiation | 10 | 30 | < th | dose independent | rect. | 11 | 1 |
| 30 | 145.47 | temperature | 20 | 90 | < th | dose dependent | rect. | 7 | 2 |
| 31 | 145.52 | temperature | 20 | 90 | < th | dose dependent | rect. | 6 | 4 |
| 37 | 145.58 | temperature | 20 | 90 | < th | dose independent | rect. | 6 | 4 |
| 38 | 145.59 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 62 | 146.57 | radiation | 10 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 64 | 146.57 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 13 |
| 79 | 147.19 | wind | 3 | 10 | < th | dose independent | rect. | 9 | 4 |
| 83 | 147.26 | wind | 1 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 97 | 147.49 | wind | 1 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 99 | 147.61 | wind | 5 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 118 | 147.95 | atmosphere | 1010 | 30 | > th | dose dependent | rect. | 24 | 10 |
| 122 | 147.99 | wind | 1 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 144 | 148.28 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 7 | 1 |
| 170 | 148.52 | temperature | 15 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 199 | 148.60 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 205 | 148.63 | radiation | 20 | 30 | < th | dose independent | rect. | 7 | 9 |
| 228 | 148.68 | temperature | 15 | 720 | < th | dose independent | rect. | 23 | 1 |
| 240 | 148.68 | temperature | 15 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 271 | 148.74 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 2 |
| 308 | 148.92 | radiation | 20 | 30 | < th | dose independent | rect. | 7 | 5 |
| 315 | 148.98 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 319 | 148.99 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 334 | 149.02 | wind | 7 | 90 | > th | dose independent | rect. | 4 | 5 |
| 344 | 149.03 | wind | 7 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 351 | 149.05 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 8 |
| 378 | 149.16 | wind | 5 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 382 | 149.18 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 385 | 149.21 | radiation | 20 | 10 | < th | dose independent | rect. | 7 | 1 |
| 393 | 149.24 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 395 | 149.25 | wind | 3 | 10 | < th | dose independent | rect. | 9 | 9 |
| 421 | 149.35 | wind | 5 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 425 | 149.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 437 | 149.46 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 462 | 149.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 472 | 149.59 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 481 | 149.63 | radiation | 20 | 90 | < th | dose dependent | rect. | 6 | 7 |
| 492 | 149.68 | radiation | 30 | 30 | < th | dose dependent | rect. | 7 | 3 |
| 495 | 149.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 514 | 149.79 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 519 | 149.81 | humidity | 60 | 10 | < th | dose independent | rect. | 18 | 1 |
| 539 | 149.83 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 9 | 1 |
| 563 | 149.89 | radiation | 30 | 10 | < th | dose independent | rect. | 9 | 1 |
| 585 | 149.98 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 6 |
| 592 | 150.00 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 4 |
| 595 | 150.00 | radiation | 30 | 10 | < th | dose independent | rect. | 20 | 14 |
| 642 | 150.11 | radiation | 20 | 90 | > th | dose independent | rect. | 15 | 21 |
| 671 | 150.19 | radiation | 30 | 10 | < th | dose independent | rect. | 18 | 16 |
| 687 | 150.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 689 | 150.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 703 | 150.28 | humidity | 80 | 90 | < th | dose independent | rect. | 8 | 2 |
| 711 | 150.29 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 715 | 150.29 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 727 | 150.31 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 12 |
| 778 | 150.39 | radiation | 1 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 794 | 150.41 | radiation | 1 | 10 | > th | dose independent | rect. | 18 | 1 |
| 833 | 150.47 | radiation | 30 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 841 | 150.48 | wind | 1 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 853 | 150.50 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 6 |
| 941 | 150.63 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 10 |
| 961 | 150.65 | radiation | 10 | 90 | > th | dose dependent | rect. | 16 | 20 |
| 968 | 150.67 | temperature | 25 | 10 | > th | dose dependent | sin | 8 | NA |
| 980 | 150.69 | humidity | 60 | 30 | < th | dose dependent | rect. | 18 | 1 |