Os07g0632000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xylanase inhibitor protein I precursor.
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Os07g0632000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xylanase inhibitor protein I precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.42 | 0.572 | 3.23 | 0.971 | 0.433 | -4 | -1.62 | 38.8 | 0.0485 | 5.32 | 31.21 | 98 | -- | -- |
| 157.24 | 0.589 | 3.36 | -0.254 | 0.453 | 0.867 | -1.63 | -- | 0.0565 | 5.31 | 31.21 | 98 | -- | -- |
| 153.54 | 0.582 | 3.26 | 0.532 | 0.444 | -3.63 | -- | 37.3 | 0.061 | 6.12 | 31.39 | 97 | -- | -- |
| 162.43 | 0.597 | 3.36 | -0.254 | 0.454 | 1.17 | -- | -- | 0.0634 | 6.15 | 32.2 | 79 | -- | -- |
| 163.47 | 0.599 | 3.27 | 0.584 | -- | -4.03 | -- | 38.8 | 0.0656 | -- | 31.39 | 97 | -- | -- |
| 161.94 | 0.597 | 3.37 | -0.221 | 0.387 | -- | -1.79 | -- | 0.0352 | 5.26 | -- | -- | -- | -- |
| 168.78 | 0.608 | 3.36 | -0.219 | 0.405 | -- | -- | -- | 0.0446 | 6.59 | -- | -- | -- | -- |
| 172.83 | 0.615 | 3.37 | -0.235 | -- | 0.981 | -- | -- | 0.0695 | -- | 32.3 | 48 | -- | -- |
| 164.12 | 0.6 | 3.35 | -- | 0.448 | 1.12 | -- | -- | 0.0909 | 6.2 | 32.2 | 79 | -- | -- |
| 177.34 | 0.622 | 3.37 | -0.209 | -- | -- | -- | -- | 0.0528 | -- | -- | -- | -- | -- |
| 170.04 | 0.61 | 3.36 | -- | 0.403 | -- | -- | -- | 0.069 | 6.62 | -- | -- | -- | -- |
| 172.11 | 0.611 | 3.37 | -- | -- | 1.25 | -- | -- | 0.0694 | -- | 35.6 | 103 | -- | -- |
| 178.5 | 0.624 | 3.36 | -- | -- | -- | -- | -- | 0.0761 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.01 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 12 | 4 |
| 5 | 147.41 | temperature | 30 | 10 | > th | dose dependent | sin | 14 | NA |
| 6 | 147.44 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 5 |
| 93 | 148.67 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 1 |
| 100 | 148.75 | temperature | 30 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 127 | 149.35 | atmosphere | 995 | 90 | > th | dose independent | sin | 7 | NA |
| 128 | 149.38 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 175 | 150.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 176 | 150.76 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 1 |
| 204 | 151.06 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 403 | 151.41 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 404 | 151.41 | atmosphere | 995 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 530 | 151.42 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 531 | 151.42 | atmosphere | 995 | 30 | < th | dose dependent | sin | 6 | NA |
| 546 | 151.52 | atmosphere | 995 | 90 | < th | dose independent | sin | 6 | NA |
| 610 | 151.68 | temperature | 30 | 90 | > th | dose dependent | no | NA | NA |
| 739 | 151.87 | atmosphere | 995 | 10 | < th | dose dependent | sin | 3 | NA |
| 766 | 152.04 | wind | 1 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 790 | 152.12 | wind | 7 | 720 | < th | dose independent | rect. | 21 | 9 |
| 794 | 152.17 | temperature | 30 | 270 | > th | dose dependent | sin | 3 | NA |
| 798 | 152.22 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 805 | 152.27 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 809 | 152.32 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 12 | 4 |
| 814 | 152.35 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 819 | 152.41 | humidity | 90 | 270 | < th | dose independent | rect. | 1 | 2 |
| 836 | 152.56 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 860 | 152.58 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 21 |
| 869 | 152.64 | temperature | 20 | 30 | > th | dose independent | rect. | 2 | 3 |
| 871 | 152.67 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 875 | 152.69 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 900 | 152.70 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 904 | 152.70 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 919 | 152.73 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 920 | 152.73 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 24 | 1 |