Os11g0701800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.2.1.14) (Class III chitinase homologue (OsChib3H-a)H-).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0701800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.2.1.14) (Class III chitinase homologue (OsChib3H-a)H-).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.53 | 0.487 | 2.99 | 0.021 | 0.121 | 0.406 | 0.464 | 1.35 | 0.0168 | 8.42 | 25.2 | 308 | -- | -- |
| 109.59 | 0.488 | 2.96 | 0.239 | 0.125 | 0.303 | 0.561 | -- | 0.0621 | 8.2 | 29.2 | 179 | -- | -- |
| 107.83 | 0.484 | 3 | 0.00912 | 0.145 | 0.419 | -- | 1.54 | -0.00126 | 6.36 | 24.23 | 419 | -- | -- |
| 110.55 | 0.49 | 2.96 | 0.259 | 0.122 | 0.318 | -- | -- | 0.0625 | 8.42 | 29.6 | 180 | -- | -- |
| 108.64 | 0.485 | 2.99 | 0.0105 | -- | 0.445 | -- | 1.47 | 0.0237 | -- | 26.15 | 409 | -- | -- |
| 110.96 | 0.494 | 2.98 | 0.167 | 0.173 | -- | 0.619 | -- | 0.00146 | 6.98 | -- | -- | -- | -- |
| 111.91 | 0.495 | 2.98 | 0.177 | 0.179 | -- | -- | -- | -0.000617 | 6.36 | -- | -- | -- | -- |
| 111.07 | 0.491 | 2.96 | 0.278 | -- | 0.381 | -- | -- | 0.0813 | -- | 29.21 | 437 | -- | -- |
| 112.11 | 0.493 | 2.97 | -- | 0.136 | 0.204 | -- | -- | 0.0155 | 7.61 | 29.7 | 175 | -- | -- |
| 113.57 | 0.498 | 2.98 | 0.182 | -- | -- | -- | -- | 0.0032 | -- | -- | -- | -- | -- |
| 112.74 | 0.497 | 2.98 | -- | 0.181 | -- | -- | -- | -0.0204 | 6.31 | -- | -- | -- | -- |
| 112.9 | 0.495 | 2.97 | -- | -- | 0.288 | -- | -- | 0.0317 | -- | 29.7 | 409 | -- | -- |
| 114.44 | 0.499 | 2.98 | -- | -- | -- | -- | -- | -0.017 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.22 | wind | 1 | 30 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 99.32 | wind | 1 | 30 | < th | dose independent | rect. | 3 | 1 |
| 7 | 103.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 8 | 103.15 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 12 | 103.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 15 | 103.26 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 16 | 103.27 | humidity | 80 | 90 | < th | dose independent | rect. | 4 | 3 |
| 18 | 103.31 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 2 |
| 27 | 103.48 | humidity | 80 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 40 | 103.71 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 44 | 103.74 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
| 49 | 103.74 | humidity | 80 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 63 | 103.79 | wind | 5 | 270 | > th | dose independent | rect. | 2 | 6 |
| 70 | 103.83 | temperature | 20 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 77 | 103.87 | temperature | 25 | 270 | < th | dose dependent | sin | 5 | NA |
| 84 | 103.92 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 1 |
| 110 | 104.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 113 | 104.06 | wind | 3 | 270 | > th | dose independent | rect. | 2 | 1 |
| 115 | 104.07 | wind | 3 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 120 | 104.10 | temperature | 20 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 125 | 104.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 235 | 104.69 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 247 | 104.76 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 251 | 104.77 | wind | 1 | 30 | < th | dose dependent | rect. | 22 | 6 |
| 286 | 104.86 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 15 |
| 290 | 104.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 295 | 104.90 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 12 |
| 310 | 104.92 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 10 |
| 314 | 104.93 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 8 |
| 427 | 105.22 | wind | 5 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 435 | 105.25 | wind | 3 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 441 | 105.26 | wind | 5 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 448 | 105.27 | wind | 1 | 30 | < th | dose dependent | rect. | 3 | 8 |
| 458 | 105.28 | wind | 1 | 30 | < th | dose dependent | rect. | 10 | 18 |
| 476 | 105.32 | wind | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 578 | 105.61 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 11 |
| 597 | 105.64 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 7 |
| 802 | 106.11 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 833 | 106.17 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 3 | 3 |
| 838 | 106.18 | wind | 3 | 10 | > th | dose independent | rect. | 5 | 2 |
| 843 | 106.19 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 2 | 1 |
| 844 | 106.19 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 3 | 4 |
| 916 | 106.32 | temperature | 20 | 90 | < th | dose independent | rect. | 24 | 7 |
| 958 | 106.38 | wind | 1 | 30 | < th | dose dependent | rect. | 6 | 22 |