Os01g0860500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hevamine A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)].
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Os01g0860500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hevamine A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)].
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.11 | 0.703 | 9.59 | -1.06 | 1.9 | -1.35 | 0.0217 | 1.39 | -0.407 | 0.0651 | 19.65 | 2160 | -- | -- |
| 226.26 | 0.701 | 9.53 | -0.856 | 1.92 | -1.66 | -0.00244 | -- | -0.335 | 0.0894 | 19.3 | 2136 | -- | -- |
| 224.11 | 0.697 | 9.59 | -1.06 | 1.9 | -1.35 | -- | 1.39 | -0.407 | 0.0656 | 19.65 | 2160 | -- | -- |
| 226.2 | 0.7 | 9.54 | -0.862 | 1.89 | -1.66 | -- | -- | -0.35 | 0.0788 | 19.3 | 2144 | -- | -- |
| 432.22 | 0.968 | 9.57 | -0.945 | -- | -1.71 | -- | 1.04 | -0.468 | -- | 20.25 | 915 | -- | -- |
| 275.04 | 0.777 | 9.47 | -0.111 | 1.98 | -- | -0.122 | -- | -0.0199 | 0.0447 | -- | -- | -- | -- |
| 275.11 | 0.777 | 9.47 | -0.106 | 1.98 | -- | -- | -- | -0.0193 | 0.0413 | -- | -- | -- | -- |
| 428.02 | 0.964 | 9.51 | -0.835 | -- | -2.1 | -- | -- | -0.367 | -- | 19.5 | 913 | -- | -- |
| 240.91 | 0.723 | 9.5 | -- | 1.92 | -1.22 | -- | -- | -0.191 | 0.0635 | 19.32 | 2030 | -- | -- |
| 522.08 | 1.07 | 9.43 | -0.0441 | -- | -- | -- | -- | 0.00867 | -- | -- | -- | -- | -- |
| 275.41 | 0.776 | 9.46 | -- | 1.98 | -- | -- | -- | -0.00751 | 0.0383 | -- | -- | -- | -- |
| 437.27 | 0.974 | 9.53 | -- | -- | -1.36 | -- | -- | -0.393 | -- | 25.1 | 889 | -- | -- |
| 522.14 | 1.07 | 9.42 | -- | -- | -- | -- | -- | 0.0136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 213.45 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 5 | 214.84 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 10 | 215.18 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 40 | 216.47 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 48 | 216.63 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 60 | 216.98 | humidity | 90 | 14400 | < th | dose independent | sin | 6 | NA |
| 73 | 217.35 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 76 | 217.41 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 79 | 217.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 83 | 217.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 93 | 217.61 | humidity | 90 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 94 | 217.62 | humidity | 90 | 14400 | > th | dose independent | sin | 5 | NA |
| 96 | 217.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 97 | 217.67 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 116 | 217.89 | humidity | 80 | 14400 | > th | dose dependent | sin | 9 | NA |
| 170 | 218.59 | humidity | 90 | 14400 | > th | dose dependent | sin | 3 | NA |
| 172 | 218.61 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 189 | 218.83 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 201 | 218.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 216 | 218.99 | humidity | 80 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 256 | 219.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 270 | 219.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 275 | 219.33 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 313 | 219.51 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 349 | 219.72 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 417 | 220.14 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 426 | 220.17 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 512 | 220.58 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 596 | 221.00 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 620 | 221.11 | humidity | 50 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 623 | 221.12 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 703 | 221.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 707 | 221.63 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 802 | 222.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 821 | 222.15 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 830 | 222.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 884 | 222.37 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 959 | 222.70 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 980 | 222.80 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 2 |