Os11g0700900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0700900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.26 | 0.291 | 8.77 | -0.488 | 0.16 | -0.125 | -0.056 | 1.59 | -0.433 | 10.1 | 19.2 | 5209 | -- | -- |
| 38.66 | 0.29 | 8.7 | -0.433 | 0.159 | -0.7 | 0.0424 | -- | -0.381 | 9.36 | 15.22 | 12187 | -- | -- |
| 38.27 | 0.288 | 8.76 | -0.49 | 0.161 | -0.126 | -- | 1.59 | -0.433 | 9.96 | 19.16 | 5206 | -- | -- |
| 38.63 | 0.289 | 8.7 | -0.439 | 0.155 | -0.711 | -- | -- | -0.386 | 9.91 | 15.29 | 12188 | -- | -- |
| 39.76 | 0.294 | 8.77 | -0.473 | -- | -0.08 | -- | 1.59 | -0.431 | -- | 19.1 | 5733 | -- | -- |
| 45.1 | 0.315 | 8.68 | -0.017 | 0.155 | -- | -0.023 | -- | -0.268 | 9.86 | -- | -- | -- | -- |
| 45.1 | 0.314 | 8.68 | -0.0179 | 0.155 | -- | -- | -- | -0.268 | 9.82 | -- | -- | -- | -- |
| 40.06 | 0.295 | 8.71 | -0.444 | -- | -0.705 | -- | -- | -0.385 | -- | 15.5 | 11929 | -- | -- |
| 41.23 | 0.299 | 8.68 | -- | 0.156 | -0.54 | -- | -- | -0.294 | 10.1 | 15.23 | 8999 | -- | -- |
| 46.54 | 0.319 | 8.68 | -0.0195 | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
| 45.11 | 0.314 | 8.68 | -- | 0.155 | -- | -- | -- | -0.266 | 9.83 | -- | -- | -- | -- |
| 42.68 | 0.304 | 8.69 | -- | -- | -0.539 | -- | -- | -0.3 | -- | 15.2 | 9021 | -- | -- |
| 46.55 | 0.318 | 8.68 | -- | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.10 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 2 | 36.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 3 | 36.14 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 5 | 36.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 12 | 36.33 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 22 | 36.41 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 40 | 36.58 | humidity | 70 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 53 | 36.64 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 76 | 36.70 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 78 | 36.70 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 96 | 36.73 | humidity | 80 | 14400 | > th | dose independent | sin | 23 | NA |
| 133 | 36.80 | humidity | 70 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 138 | 36.81 | humidity | 80 | 14400 | > th | dose dependent | sin | 1 | NA |
| 144 | 36.83 | humidity | 80 | 14400 | < th | dose independent | sin | 23 | NA |
| 168 | 36.86 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 190 | 36.89 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 246 | 36.94 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 274 | 36.96 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 391 | 37.08 | humidity | 90 | 14400 | < th | dose independent | sin | 3 | NA |
| 511 | 37.16 | humidity | 80 | 14400 | > th | dose dependent | rect. | 8 | 17 |
| 572 | 37.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 679 | 37.27 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 744 | 37.31 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 756 | 37.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 758 | 37.32 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 765 | 37.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 828 | 37.35 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 922 | 37.41 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 946 | 37.42 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 947 | 37.42 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 960 | 37.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 1000 | 37.44 | wind | 3 | 43200 | < th | dose dependent | rect. | 24 | 7 |