Os11g0701100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Class III chitinase homologue (OsChib3H-h) (Fragment).
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Os11g0701100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Class III chitinase homologue (OsChib3H-h) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.95 | 0.575 | 5.06 | 1.09 | 0.923 | -1.25 | 0.698 | 0.378 | -0.285 | 8.64 | 22.1 | 777 | -- | -- |
| 150.35 | 0.571 | 5.07 | 0.976 | 0.922 | -1.26 | 0.55 | -- | -0.313 | 8.66 | 22.07 | 777 | -- | -- |
| 151.27 | 0.573 | 5.07 | 1.02 | 0.918 | -1.25 | -- | 0.0992 | -0.305 | 8.73 | 22.08 | 768 | -- | -- |
| 151.3 | 0.573 | 5.07 | 0.991 | 0.919 | -1.25 | -- | -- | -0.314 | 8.74 | 22.07 | 765 | -- | -- |
| 196.27 | 0.652 | 5.07 | 1.14 | -- | -1.49 | -- | 0.144 | -0.219 | -- | 22 | 757 | -- | -- |
| 216.86 | 0.69 | 5.16 | 0.558 | 1.16 | -- | 0.493 | -- | -0.718 | 8.93 | -- | -- | -- | -- |
| 217.68 | 0.691 | 5.16 | 0.575 | 1.16 | -- | -- | -- | -0.718 | 8.97 | -- | -- | -- | -- |
| 196.22 | 0.652 | 5.08 | 1.13 | -- | -1.52 | -- | -- | -0.231 | -- | 21.87 | 775 | -- | -- |
| 174.96 | 0.616 | 5.1 | -- | 0.973 | -1.04 | -- | -- | -0.447 | 8.69 | 22.2 | 763 | -- | -- |
| 294.84 | 0.802 | 5.19 | 0.574 | -- | -- | -- | -- | -0.71 | -- | -- | -- | -- | -- |
| 226.4 | 0.704 | 5.17 | -- | 1.16 | -- | -- | -- | -0.782 | 8.93 | -- | -- | -- | -- |
| 224.79 | 0.698 | 5.12 | -- | -- | -1.25 | -- | -- | -0.398 | -- | 22.26 | 763 | -- | -- |
| 303.54 | 0.813 | 5.2 | -- | -- | -- | -- | -- | -0.774 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 9 | 152.34 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 66 | 155.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 68 | 155.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 82 | 156.13 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 89 | 156.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 109 | 156.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 112 | 156.99 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 138 | 157.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 261 | 160.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 283 | 161.10 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 289 | 161.14 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 292 | 161.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 296 | 161.23 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 309 | 161.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 311 | 161.41 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 344 | 161.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 376 | 161.95 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 412 | 162.20 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 470 | 162.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 479 | 162.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 480 | 162.58 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 551 | 162.92 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 22 |
| 561 | 162.98 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 567 | 163.03 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 568 | 163.04 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 17 |
| 581 | 163.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 630 | 163.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 679 | 163.59 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 696 | 163.69 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 706 | 163.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 762 | 163.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 778 | 163.97 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 863 | 164.25 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 869 | 164.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 871 | 164.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 882 | 164.34 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 941 | 164.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 963 | 164.65 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |